BLASTX nr result

ID: Glycyrrhiza24_contig00023001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023001
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623483.1| Protein SCAR2 [Medicago truncatula] gi|35549...   102   3e-20
ref|XP_003551590.1| PREDICTED: protein SCAR2-like [Glycine max]        94   1e-17

>ref|XP_003623483.1| Protein SCAR2 [Medicago truncatula] gi|355498498|gb|AES79701.1|
           Protein SCAR2 [Medicago truncatula]
          Length = 1495

 Score =  102 bits (254), Expect(2) = 3e-20
 Identities = 55/88 (62%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = -1

Query: 344 SQSTGIPCASDDNSSFRRDRNEEHTQLQAQFSDSKSIRNSSLEIENMPSNQVPQTVELPN 165
           S S G  CASDD+S F+RD NEEHTQ QAQFSDS+SI NSS E ENM SNQ+P TVE   
Sbjct: 471 SHSAGTYCASDDHSLFQRDSNEEHTQPQAQFSDSQSIGNSSSETENMSSNQLPHTVESQK 530

Query: 164 IHGEFVTH-DDTHDQGEVISDSKPVTYG 84
              EF +H DD HD G  ISDS  V+ G
Sbjct: 531 TCDEFFSHYDDAHDNGRAISDSGSVSSG 558



 Score = 20.8 bits (42), Expect(2) = 3e-20
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 37  ATSLVSLPTGTQ 2
           ATSL +LPT TQ
Sbjct: 577 ATSLAALPTKTQ 588


>ref|XP_003551590.1| PREDICTED: protein SCAR2-like [Glycine max]
          Length = 1323

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/88 (60%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -1

Query: 344 SQSTGIPCASDDNSSFRRDRNEEHTQLQAQFSDSKSIRNSSLEIENMPSNQVPQTVELPN 165
           S STG   ASDDNS FRRD +EEH+QLQ QFSD + IRNS+  IE+M S+Q+P T E   
Sbjct: 470 SLSTGTSWASDDNSPFRRDISEEHSQLQ-QFSDFQYIRNSTSRIEDMSSDQLPPTFEFQR 528

Query: 164 IH-GEFVTHDDTHDQGEVISDSKPVTYG 84
            +  EFV  DD H QGEVISDS+PV+ G
Sbjct: 529 TYCREFVVDDDEHAQGEVISDSRPVSSG 556


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