BLASTX nr result

ID: Glycyrrhiza24_contig00022464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022464
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526807.1| PREDICTED: exosome complex exonuclease RRP44...   295   4e-78
ref|XP_003523275.1| PREDICTED: exosome complex exonuclease RRP44...   289   3e-76
ref|XP_003539576.1| PREDICTED: exosome complex exonuclease RRP44...   283   2e-74
ref|XP_003629102.1| Exosome complex exonuclease [Medicago trunca...   274   9e-72
ref|XP_004169783.1| PREDICTED: exosome complex exonuclease RRP44...   260   1e-67

>ref|XP_003526807.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
          Length = 934

 Score =  295 bits (756), Expect = 4e-78
 Identities = 142/150 (94%), Positives = 148/150 (98%)
 Frame = +3

Query: 210 MLHNKSFVKKTKGGRVMKQLREHYLRDDIYCGAPFCTACDSSGARLSASASTILVVDTNV 389
           MLHNKSFVKKTKGG+VMKQ+REHYLRDDIYCGAPFCT CDSSGARLSAS STILVVDTNV
Sbjct: 1   MLHNKSFVKKTKGGKVMKQVREHYLRDDIYCGAPFCTVCDSSGARLSASPSTILVVDTNV 60

Query: 390 VLNQIDLLENPAIDDVVMLSIVLEEVKNKNMSIYNRIRAICNNSMRKFFVFSNEYHRDTY 569
           VLNQIDLLENPAIDDVV+LSIVLEEVKNKNMS+YNRIRAIC+NSMRKFFVFSNEYHRDTY
Sbjct: 61  VLNQIDLLENPAIDDVVVLSIVLEEVKNKNMSVYNRIRAICSNSMRKFFVFSNEYHRDTY 120

Query: 570 VKEMSGETKNDRNDRAIRVATQWYQNHLGG 659
           +KEMSGETKNDRNDRAIRVATQWYQNHLGG
Sbjct: 121 IKEMSGETKNDRNDRAIRVATQWYQNHLGG 150


>ref|XP_003523275.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
          Length = 934

 Score =  289 bits (740), Expect = 3e-76
 Identities = 139/150 (92%), Positives = 146/150 (97%)
 Frame = +3

Query: 210 MLHNKSFVKKTKGGRVMKQLREHYLRDDIYCGAPFCTACDSSGARLSASASTILVVDTNV 389
           MLHNKSFVKKTKGG+V+KQ+REHYLRDDIYCGAPFCT CDSS ARLSAS S ILVVDTNV
Sbjct: 1   MLHNKSFVKKTKGGKVIKQVREHYLRDDIYCGAPFCTVCDSSSARLSASPSIILVVDTNV 60

Query: 390 VLNQIDLLENPAIDDVVMLSIVLEEVKNKNMSIYNRIRAICNNSMRKFFVFSNEYHRDTY 569
           VLNQIDLLENPAIDDVV+LSIVLEEVKNKNMS+YNRIRAIC+NSMRKFFVFSNEYHRDTY
Sbjct: 61  VLNQIDLLENPAIDDVVVLSIVLEEVKNKNMSVYNRIRAICSNSMRKFFVFSNEYHRDTY 120

Query: 570 VKEMSGETKNDRNDRAIRVATQWYQNHLGG 659
           +KEMSGETKNDRNDRAIRVATQWYQNHLGG
Sbjct: 121 IKEMSGETKNDRNDRAIRVATQWYQNHLGG 150


>ref|XP_003539576.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
          Length = 439

 Score =  283 bits (724), Expect = 2e-74
 Identities = 138/151 (91%), Positives = 146/151 (96%), Gaps = 1/151 (0%)
 Frame = +3

Query: 210 MLHNKSFVKKTKGGRVMK-QLREHYLRDDIYCGAPFCTACDSSGARLSASASTILVVDTN 386
           MLHNKSFVKKTKGG+V+K Q+REHYLRDDIYCGAPFCT CDSS ARLSAS STIL VDTN
Sbjct: 1   MLHNKSFVKKTKGGKVIKYQVREHYLRDDIYCGAPFCTVCDSSSARLSASPSTILFVDTN 60

Query: 387 VVLNQIDLLENPAIDDVVMLSIVLEEVKNKNMSIYNRIRAICNNSMRKFFVFSNEYHRDT 566
           VVLNQIDLLENPAIDDVV+LSIVLEEVKNKNMS+YNRIRAIC++SMRKFFVFSNEYHRDT
Sbjct: 61  VVLNQIDLLENPAIDDVVVLSIVLEEVKNKNMSVYNRIRAICSHSMRKFFVFSNEYHRDT 120

Query: 567 YVKEMSGETKNDRNDRAIRVATQWYQNHLGG 659
           Y+KEMSGETKNDRNDRAIRVATQWYQNHLGG
Sbjct: 121 YIKEMSGETKNDRNDRAIRVATQWYQNHLGG 151


>ref|XP_003629102.1| Exosome complex exonuclease [Medicago truncatula]
           gi|355523124|gb|AET03578.1| Exosome complex exonuclease
           [Medicago truncatula]
          Length = 1045

 Score =  274 bits (701), Expect = 9e-72
 Identities = 130/149 (87%), Positives = 144/149 (96%)
 Frame = +3

Query: 210 MLHNKSFVKKTKGGRVMKQLREHYLRDDIYCGAPFCTACDSSGARLSASASTILVVDTNV 389
           MLHNKSFVKKTKGG+V++Q+REHYLRDDIYCGAP CT C++SGARLSAS STILV+DTNV
Sbjct: 1   MLHNKSFVKKTKGGKVIRQVREHYLRDDIYCGAPSCTICNTSGARLSASPSTILVLDTNV 60

Query: 390 VLNQIDLLENPAIDDVVMLSIVLEEVKNKNMSIYNRIRAICNNSMRKFFVFSNEYHRDTY 569
           VLNQIDLLENPAIDDVV+LSIVL+EVKNKN+S+YNR+RAIC+N MRKFFVFSNEYHRDTY
Sbjct: 61  VLNQIDLLENPAIDDVVVLSIVLDEVKNKNLSVYNRLRAICSNPMRKFFVFSNEYHRDTY 120

Query: 570 VKEMSGETKNDRNDRAIRVATQWYQNHLG 656
           VKEMSGETKNDRNDRAIRVA+QWYQ HLG
Sbjct: 121 VKEMSGETKNDRNDRAIRVASQWYQKHLG 149


>ref|XP_004169783.1| PREDICTED: exosome complex exonuclease RRP44-like, partial [Cucumis
           sativus]
          Length = 732

 Score =  260 bits (665), Expect = 1e-67
 Identities = 121/150 (80%), Positives = 138/150 (92%)
 Frame = +3

Query: 210 MLHNKSFVKKTKGGRVMKQLREHYLRDDIYCGAPFCTACDSSGARLSASASTILVVDTNV 389
           MLHNKSFVKKTK G+VMKQ+REHYLRDDIYCGA  C  CDSS ARL AS S ILV+DTNV
Sbjct: 1   MLHNKSFVKKTKSGKVMKQVREHYLRDDIYCGASICKKCDSSVARLGASTSPILVLDTNV 60

Query: 390 VLNQIDLLENPAIDDVVMLSIVLEEVKNKNMSIYNRIRAICNNSMRKFFVFSNEYHRDTY 569
           VL QIDLLENPAIDDVVMLS+VL+EVKNKN+S+YNR+RA+C+N +R+FFVFSNE+H+DTY
Sbjct: 61  VLTQIDLLENPAIDDVVMLSVVLDEVKNKNLSVYNRVRALCSNPLRRFFVFSNEHHKDTY 120

Query: 570 VKEMSGETKNDRNDRAIRVATQWYQNHLGG 659
           +K+MSGE+KNDRNDRAIRVA QWYQNHLGG
Sbjct: 121 IKDMSGESKNDRNDRAIRVAAQWYQNHLGG 150


Top