BLASTX nr result

ID: Glycyrrhiza24_contig00022461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022461
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica...   293   8e-78
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   291   4e-77
ref|XP_003609690.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   290   1e-76
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica...   284   5e-75
emb|CBI36896.3| unnamed protein product [Vitis vinifera]              230   8e-59

>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
            max]
          Length = 1403

 Score =  293 bits (751), Expect = 8e-78
 Identities = 147/174 (84%), Positives = 154/174 (88%)
 Frame = +3

Query: 3    LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVQWISKXXXXXXXXXXXX 182
            LVVVATNVAETSLTIPGIKYVVDTGREKVKNYD SNGMETYEVQWISK            
Sbjct: 794  LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDPSNGMETYEVQWISKASAAQRAGRSGR 853

Query: 183  XXXXHCYRLYSSAAFNNEFPEYSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAAS 362
                HCYRLYSSAAF+NEFPE+SPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLK +S
Sbjct: 854  TGPGHCYRLYSSAAFSNEFPEHSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKDSS 913

Query: 363  LLEAENCLKTLEALDSKDELTILGKAMALYPLSPRHSRMILTVIKNTRHEHQCN 524
            LLEAENCLK LEALD+KDELT+LGKAMA YPLSPRHSRM+LTVIKNTRHEH+CN
Sbjct: 914  LLEAENCLKALEALDNKDELTLLGKAMAHYPLSPRHSRMLLTVIKNTRHEHKCN 967


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula]
          Length = 1331

 Score =  291 bits (745), Expect = 4e-77
 Identities = 148/175 (84%), Positives = 155/175 (88%)
 Frame = +3

Query: 3    LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVQWISKXXXXXXXXXXXX 182
            LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEV+WISK            
Sbjct: 719  LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGR 778

Query: 183  XXXXHCYRLYSSAAFNNEFPEYSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAAS 362
                HCYRLYSSAAF+NEFPE+SPAEVEKVPVHGVVLLLKSM IKKVANFPFPTSLKAAS
Sbjct: 779  TAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAAS 838

Query: 363  LLEAENCLKTLEALDSKDELTILGKAMALYPLSPRHSRMILTVIKNTRHEHQCNS 527
            LLEAENCL+ LEALDSKDELT+LGKAMALYPLSPRHSRMILTVIKNTR++  CNS
Sbjct: 839  LLEAENCLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKRICNS 893


>ref|XP_003609690.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 [Medicago
            truncatula] gi|355510745|gb|AES91887.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase prp16 [Medicago
            truncatula]
          Length = 1256

 Score =  290 bits (741), Expect = 1e-76
 Identities = 148/175 (84%), Positives = 155/175 (88%)
 Frame = +3

Query: 3    LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVQWISKXXXXXXXXXXXX 182
            LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEV+WISK            
Sbjct: 645  LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGR 704

Query: 183  XXXXHCYRLYSSAAFNNEFPEYSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAAS 362
                HCYRLYSSAAF+NEFPE+SPAEVEKVPVHGVVLLLKSM IKKVANFPFPTSLKAAS
Sbjct: 705  TAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAAS 764

Query: 363  LLEAENCLKTLEALDSKDELTILGKAMALYPLSPRHSRMILTVIKNTRHEHQCNS 527
            LLEAENCL+ LEALDSKDELT+LGKAMALYPLSPRHSRMILTVIKNTR++H  NS
Sbjct: 765  LLEAENCLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNS 819


>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
            max]
          Length = 1380

 Score =  284 bits (727), Expect = 5e-75
 Identities = 144/174 (82%), Positives = 151/174 (86%)
 Frame = +3

Query: 3    LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVQWISKXXXXXXXXXXXX 182
            LVVVATNVAETSLTIPGIKYVVDTGREKVKNYD SNGMETYEVQWISK            
Sbjct: 770  LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDPSNGMETYEVQWISKASAAQRAGRSGR 829

Query: 183  XXXXHCYRLYSSAAFNNEFPEYSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAAS 362
                HCYRLYSSAAF+NEFPE+SPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLK +S
Sbjct: 830  TGPGHCYRLYSSAAFSNEFPEHSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKDSS 889

Query: 363  LLEAENCLKTLEALDSKDELTILGKAMALYPLSPRHSRMILTVIKNTRHEHQCN 524
            LLEAE CLK LEALD+KDELT+LGKAMA YPLSPRHSRM+LTVIKNTRH H+ N
Sbjct: 890  LLEAETCLKALEALDNKDELTLLGKAMAHYPLSPRHSRMLLTVIKNTRHVHKFN 943


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  230 bits (587), Expect = 8e-59
 Identities = 120/168 (71%), Positives = 130/168 (77%)
 Frame = +3

Query: 3    LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVQWISKXXXXXXXXXXXX 182
            LVVVATNVAETSLTIPGIKYVVDTGREKVKNYD SNGMETYEVQWISK            
Sbjct: 575  LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDHSNGMETYEVQWISKASAAQRAGRAGR 634

Query: 183  XXXXHCYRLYSSAAFNNEFPEYSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAAS 362
                HCYRLYSSA FNN  P++S AE+ KVPV GV+LL+KSM I KVANFPFPT   A +
Sbjct: 635  TGPGHCYRLYSSAVFNNILPDFSMAEILKVPVEGVILLMKSMDIDKVANFPFPTPPDAIA 694

Query: 363  LLEAENCLKTLEALDSKDELTILGKAMALYPLSPRHSRMILTVIKNTR 506
            L EAE CLK LEAL+SK  LT LGKAMA YP+SPRHSRM+LTVI+  R
Sbjct: 695  LAEAERCLKALEALNSKGRLTPLGKAMAHYPMSPRHSRMLLTVIQIMR 742


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