BLASTX nr result
ID: Glycyrrhiza24_contig00022458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00022458
(355 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi... 227 7e-58
ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containi... 225 3e-57
ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|2... 198 4e-49
ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi... 195 3e-48
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera] 195 3e-48
>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 227 bits (579), Expect = 7e-58
Identities = 104/118 (88%), Positives = 114/118 (96%)
Frame = +2
Query: 2 WCRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTIS 181
WCRVRNPTRGMKLLEEMI+LGH+PDNFTYNT +DTYCK GMI EAVDLFEFMRTKGSTIS
Sbjct: 176 WCRVRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTIS 235
Query: 182 SPTAKSYAIMIVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
SPTAK+YAI+IVAL Q+DRME+CFKL+GHMISSGCLPDVTTYK+IIEGMC+CGKIDEA
Sbjct: 236 SPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEA 293
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/95 (33%), Positives = 46/95 (48%)
Frame = +2
Query: 35 KLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMI 214
KL+ MI G PD TY ++ C G I+EA ++F+ G+ P +Y +
Sbjct: 260 KLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEA---YKFLEEMGNKSYRPDIVTYNCFL 316
Query: 215 VALVQNDRMEECFKLMGHMISSGCLPDVTTYKDII 319
L N + E+ KL G MI C+P V TY +I
Sbjct: 317 KVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLI 351
>ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 225 bits (574), Expect = 3e-57
Identities = 102/118 (86%), Positives = 114/118 (96%)
Frame = +2
Query: 2 WCRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTIS 181
WCRVRNPTRGMKLLEEM++LGH+PDNF YNT +DTYCKAGM+ EAVDLFEFMRTKGS+IS
Sbjct: 176 WCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSIS 235
Query: 182 SPTAKSYAIMIVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
SPTAK+YAI+IVAL Q+DRMEECFKL+GHMISSGCLPDVTTYK+IIEGMC+CGKIDEA
Sbjct: 236 SPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEA 293
Score = 58.5 bits (140), Expect = 5e-07
Identities = 32/95 (33%), Positives = 46/95 (48%)
Frame = +2
Query: 35 KLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMI 214
KL+ MI G PD TY ++ C G I+EA ++F+ G+ P +Y +
Sbjct: 260 KLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEA---YKFLEEMGNKSYRPDIVTYNCFL 316
Query: 215 VALVQNDRMEECFKLMGHMISSGCLPDVTTYKDII 319
L N + E+ KL G MI C+P V TY +I
Sbjct: 317 KVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLI 351
Score = 57.0 bits (136), Expect = 2e-06
Identities = 32/107 (29%), Positives = 53/107 (49%)
Frame = +2
Query: 35 KLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMI 214
K LEEM ++PD TYN L C +A+ L+ M P+ ++Y ++I
Sbjct: 295 KFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCI---PSVQTYNMLI 351
Query: 215 VALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
+ D + F+ M + GC PD+ TY +I+G+ C K+++A
Sbjct: 352 SMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNCNKVEDA 398
>ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|222864867|gb|EEF01998.1|
predicted protein [Populus trichocarpa]
Length = 472
Score = 198 bits (503), Expect = 4e-49
Identities = 90/118 (76%), Positives = 108/118 (91%)
Frame = +2
Query: 2 WCRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTIS 181
WCRVRNPTRGMK+LEEMIQLGH PD+FTY T +D +C+AGM+NEA +LFEFMRTKGST+S
Sbjct: 182 WCRVRNPTRGMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMS 241
Query: 182 SPTAKSYAIMIVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
SPTAK+YAIMI ALV+N+RM+ECFKL+ MI+SGCLPDV+T+K++IEGMC GKIDEA
Sbjct: 242 SPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEA 299
Score = 60.8 bits (146), Expect = 1e-07
Identities = 36/107 (33%), Positives = 52/107 (48%)
Frame = +2
Query: 35 KLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISSPTAKSYAIMI 214
KLLE+MI G PD T+ ++ C AG I+EA + F++ G+ P +Y +
Sbjct: 266 KLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEA---YRFLQEMGNKGYPPDIVTYNCFL 322
Query: 215 VALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
L +N EE +L MI +GC P V T+ +I G D A
Sbjct: 323 KVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGA 369
>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 195 bits (496), Expect = 3e-48
Identities = 87/118 (73%), Positives = 108/118 (91%)
Frame = +2
Query: 2 WCRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTIS 181
WCRVRNP+RGM++LEEMI++GH PD+FTYNT +D++CKAGM+ EA +LFEFMRTKGST+S
Sbjct: 419 WCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMS 478
Query: 182 SPTAKSYAIMIVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
SPTAK+YAIMI+ALVQ+DR EECFKL+ MI+SG LPDV+TYK +IEGMCL GK++EA
Sbjct: 479 SPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEA 536
Score = 57.8 bits (138), Expect = 9e-07
Identities = 35/117 (29%), Positives = 53/117 (45%)
Frame = +2
Query: 5 CRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISS 184
C K LEEM G++PD TYN LD C+ EA+ L+ M G
Sbjct: 528 CLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCV--- 584
Query: 185 PTAKSYAIMIVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
P+ ++ ++I + + F+ M GC D TY +IEG+ C K+++A
Sbjct: 585 PSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDA 641
>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 195 bits (496), Expect = 3e-48
Identities = 87/118 (73%), Positives = 108/118 (91%)
Frame = +2
Query: 2 WCRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTIS 181
WCRVRNP+RGM++LEEMI++GH PD+FTYNT +D++CKAGM+ EA +LFEFMRTKGST+S
Sbjct: 392 WCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMS 451
Query: 182 SPTAKSYAIMIVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
SPTAK+YAIMI+ALVQ+DR EECFKL+ MI+SG LPDV+TYK +IEGMCL GK++EA
Sbjct: 452 SPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEA 509
Score = 57.8 bits (138), Expect = 9e-07
Identities = 35/117 (29%), Positives = 53/117 (45%)
Frame = +2
Query: 5 CRVRNPTRGMKLLEEMIQLGHKPDNFTYNTTLDTYCKAGMINEAVDLFEFMRTKGSTISS 184
C K LEEM G++PD TYN LD C+ EA+ L+ M G
Sbjct: 501 CLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCV--- 557
Query: 185 PTAKSYAIMIVALVQNDRMEECFKLMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEA 355
P+ ++ ++I + + F+ M GC D TY +IEG+ C K+++A
Sbjct: 558 PSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDA 614