BLASTX nr result

ID: Glycyrrhiza24_contig00022454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022454
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containi...   337   1e-90
ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containi...   332   7e-89
ref|XP_003597701.1| Pentatricopeptide repeat-containing protein ...   327   1e-87
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   285   7e-75
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   281   8e-74

>ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  337 bits (865), Expect = 1e-90
 Identities = 172/246 (69%), Positives = 190/246 (77%)
 Frame = -3

Query: 740 DDATVLSRLGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXAKEDPEMAFELLKQMKSAG 561
           + A  +  LGL+RGFEIFQQMLND+V+PNE           AKEDP+MAFELLKQMK+  
Sbjct: 121 ESAAGVPHLGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVA 180

Query: 560 IAPKLRSYAPALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKNEDKVY 381
           IAPKLRSY PAL+GFCKRGDAEKAY VDADM+ESG++AEEPELSALLEVSV A  EDKVY
Sbjct: 181 IAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEVSVNANKEDKVY 240

Query: 380 EMLRRLRAAVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXXXXXXX 201
           E+L RLRA +RQVSESTL I+E+WF SEYAA IGK  WD  KVREGI             
Sbjct: 241 EVLHRLRATLRQVSESTLGIVENWFNSEYAAKIGKEKWDVKKVREGIARGGGGWHGQGWL 300

Query: 200 XXXXWKVDKTHVNEDGMCLSCGEKLVSVDIDPKETENFAASLSKLACQREVKANFNHFQK 21
               WKV  T VNEDG+CLSCGEKL S+DIDPKETENFAASLSKLACQ+E KANF HFQ 
Sbjct: 301 GSGRWKVVNTQVNEDGVCLSCGEKLASIDIDPKETENFAASLSKLACQKEAKANFVHFQT 360

Query: 20  WLERHG 3
           WLERHG
Sbjct: 361 WLERHG 366


>ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 559

 Score =  332 bits (850), Expect = 7e-89
 Identities = 168/246 (68%), Positives = 188/246 (76%)
 Frame = -3

Query: 740 DDATVLSRLGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXAKEDPEMAFELLKQMKSAG 561
           + A     LGL+RGFE+FQQMLND+V+PNE           A EDP+MAFELLKQMK+  
Sbjct: 120 ESAAGFPNLGLKRGFEVFQQMLNDRVQPNEATFTNAARLAAANEDPDMAFELLKQMKNVA 179

Query: 560 IAPKLRSYAPALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKNEDKVY 381
           IAPKLRSY PAL+GFCKRGDAEKAY VDADM+ESG++AEEPELSALLEVSV AK EDKVY
Sbjct: 180 IAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEVSVNAKKEDKVY 239

Query: 380 EMLRRLRAAVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXXXXXXX 201
           ++L RLR+ +RQVSESTL I+EDWF SEYAA IGK  WD  KVREGI             
Sbjct: 240 DILHRLRSTLRQVSESTLGIVEDWFNSEYAAKIGKEKWDVKKVREGIAQGGGGWHGQGWL 299

Query: 200 XXXXWKVDKTHVNEDGMCLSCGEKLVSVDIDPKETENFAASLSKLACQREVKANFNHFQK 21
               WKV  T VNEDG+C  CGEKLVS+DIDPKETENFAASLSKLACQ+E KANF HFQ 
Sbjct: 300 GSGRWKVANTQVNEDGVCPLCGEKLVSIDIDPKETENFAASLSKLACQKEAKANFVHFQT 359

Query: 20  WLERHG 3
           WLE+HG
Sbjct: 360 WLEQHG 365


>ref|XP_003597701.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355486749|gb|AES67952.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 558

 Score =  327 bits (839), Expect = 1e-87
 Identities = 171/249 (68%), Positives = 190/249 (76%)
 Frame = -3

Query: 749 VQTDDATVLSRLGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXAKEDPEMAFELLKQMK 570
           VQ  D +    LGL+RGFEIF+QML D V+PNE           AKEDPEMAFELLKQMK
Sbjct: 129 VQNGDGSFF-HLGLQRGFEIFEQMLRDNVEPNEATFTNAARLAAAKEDPEMAFELLKQMK 187

Query: 569 SAGIAPKLRSYAPALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKNED 390
             GIAPKLRSY PALYGFC RGDA KAY+VD DMIESGVMAEE EL ALLEVSV  KNED
Sbjct: 188 RVGIAPKLRSYGPALYGFCARGDAMKAYEVDDDMIESGVMAEEDELCALLEVSVEVKNED 247

Query: 389 KVYEMLRRLRAAVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXXXX 210
           KVYE+L RLRA VRQVSESTL++IEDWF SEYA  IGK  WD +++REG V         
Sbjct: 248 KVYEILHRLRAVVRQVSESTLKVIEDWFESEYAMKIGKREWDDEEIREGFVRGGGGWHGQ 307

Query: 209 XXXXXXXWKVDKTHVNEDGMCLSCGEKLVSVDIDPKETENFAASLSKLACQREVKANFNH 30
                  WKV KT+V+EDGMCLSC EKLVS+DIDPKETENFAASLSKLA +++ KANFNH
Sbjct: 308 GWLGSGEWKVVKTNVDEDGMCLSCSEKLVSIDIDPKETENFAASLSKLAHEKQPKANFNH 367

Query: 29  FQKWLERHG 3
           FQKWLE++G
Sbjct: 368 FQKWLEKNG 376


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  285 bits (729), Expect = 7e-75
 Identities = 143/238 (60%), Positives = 178/238 (74%)
 Frame = -3

Query: 716 LGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXAKEDPEMAFELLKQMKSAGIAPKLRSY 537
           L L+RGFEIF+QM  D ++PNE           A EDPEMAF L+KQMKS GI PKLRSY
Sbjct: 102 LALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEMAFNLVKQMKSCGIPPKLRSY 161

Query: 536 APALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKNEDKVYEMLRRLRA 357
            P L+GFCK+GDA++AY+VDA M+ESGV+AEEPEL ALL +SV ++  D+VYEM+ RLRA
Sbjct: 162 GPPLFGFCKKGDADRAYEVDAHMMESGVVAEEPELCALLGLSVESRRVDRVYEMVHRLRA 221

Query: 356 AVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXXXXXXXXXXXWKVD 177
           +VRQVSEST  ++E WF SE AA +G+ +WD  KVREG+V                WKV 
Sbjct: 222 SVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVREGVVKGGGGWHGQGWLGKGKWKVV 281

Query: 176 KTHVNEDGMCLSCGEKLVSVDIDPKETENFAASLSKLACQREVKANFNHFQKWLERHG 3
           +T ++E G+C SCGEKLV +DIDP+ETENFA+SL+KLACQREVKA+F  FQ+WL+RHG
Sbjct: 282 RTEMDEAGVCQSCGEKLVCIDIDPRETENFASSLTKLACQREVKADFVQFQEWLQRHG 339


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  281 bits (720), Expect = 8e-74
 Identities = 142/238 (59%), Positives = 176/238 (73%)
 Frame = -3

Query: 716  LGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXAKEDPEMAFELLKQMKSAGIAPKLRSY 537
            L L+RGFEIF+QM  D ++PNE           A EDPEMAF L+KQMKS GI PKLRSY
Sbjct: 471  LALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEMAFNLVKQMKSCGIPPKLRSY 530

Query: 536  APALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKNEDKVYEMLRRLRA 357
             P L+GFCK+GDA +AY+VDA M+ESGV+AEEPEL ALL +SV ++  D+VYEM+ RLRA
Sbjct: 531  GPPLFGFCKKGDANRAYEVDAHMVESGVVAEEPELCALLGLSVESRWVDQVYEMMHRLRA 590

Query: 356  AVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXXXXXXXXXXXWKVD 177
            +VRQVSEST  ++E WF SE AA +G+ +WD  KVREG+V                WKV 
Sbjct: 591  SVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVREGVVKGGGGWHGQGWLGKGKWKVG 650

Query: 176  KTHVNEDGMCLSCGEKLVSVDIDPKETENFAASLSKLACQREVKANFNHFQKWLERHG 3
            +T ++E G+C SCGEKLV +DIDP+ETENFA+SL+KLACQREVKA+F  FQ+WL+ HG
Sbjct: 651  RTEMDEAGVCQSCGEKLVGIDIDPRETENFASSLTKLACQREVKADFVQFQEWLQWHG 708


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