BLASTX nr result

ID: Glycyrrhiza24_contig00022450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022450
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520725.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   151   6e-35
ref|XP_003554495.1| PREDICTED: F-box protein At5g06550-like [Gly...   144   1e-32
ref|XP_002524104.1| transferase, transferring glycosyl groups, p...   134   8e-30
ref|XP_004164485.1| PREDICTED: F-box protein At5g06550-like isof...   123   1e-26
ref|XP_004164484.1| PREDICTED: F-box protein At5g06550-like isof...   123   1e-26

>ref|XP_003520725.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g06550-like
           [Glycine max]
          Length = 639

 Score =  151 bits (381), Expect = 6e-35
 Identities = 89/148 (60%), Positives = 101/148 (68%), Gaps = 2/148 (1%)
 Frame = -1

Query: 440 TATLESTDSTMPSFRMKSLLSSVXXXXXXXXXXXXXXXXXKQNSISITTKDFPCL--RXX 267
           T  L   D+TM SFRM++LLSSV                  +N ISIT K+   L     
Sbjct: 121 TKNLAVDDNTMRSFRMRNLLSSVKKKTIENRNKTS------RNCISIT-KELARLVEEEE 173

Query: 266 XXXXXXXEGFSIKSSAPSHTHGVQPLGNLYLNPGTSTNSRDTGLGNLHALTDELVLDILG 87
                  EGF+IKSSAPSHTHGVQPLGNLYLN G STNSRDTGLGNLH L+D+LVLDILG
Sbjct: 174 EEEEVNEEGFNIKSSAPSHTHGVQPLGNLYLNTG-STNSRDTGLGNLHTLSDDLVLDILG 232

Query: 86  FLDGTCLGVLSSVSKSFYVFANHEPLWR 3
           FLD + LG+L++VSKSFYVF NHEPLWR
Sbjct: 233 FLDASSLGILATVSKSFYVFTNHEPLWR 260


>ref|XP_003554495.1| PREDICTED: F-box protein At5g06550-like [Glycine max]
          Length = 507

 Score =  144 bits (362), Expect = 1e-32
 Identities = 86/138 (62%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
 Frame = -1

Query: 410 MPSFRMKSLLSSVXXXXXXXXXXXXXXXXXKQNSISITTKDFPCL--RXXXXXXXXXEGF 237
           M SFRM++LLS V                  ++ ISIT K+   L  +         EGF
Sbjct: 1   MRSFRMRNLLSRVKKKTIKNRN---------RSCISIT-KELAHLVEQEEEEEEVNEEGF 50

Query: 236 SIKSSAPSHTHGVQPLGNLYLNPGTSTNSRDTGLGNLHALTDELVLDILGFLDGTCLGVL 57
           +IKSSAPSHTHGVQPLGNLYLN  +STNSRDTGLGNLH L+DELVLDILGFLD T LGVL
Sbjct: 51  NIKSSAPSHTHGVQPLGNLYLNT-SSTNSRDTGLGNLHTLSDELVLDILGFLDSTSLGVL 109

Query: 56  SSVSKSFYVFANHEPLWR 3
           +SVSKSFYVF NHEPLWR
Sbjct: 110 ASVSKSFYVFTNHEPLWR 127


>ref|XP_002524104.1| transferase, transferring glycosyl groups, putative [Ricinus
           communis] gi|223536672|gb|EEF38314.1| transferase,
           transferring glycosyl groups, putative [Ricinus
           communis]
          Length = 810

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/81 (82%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
 Frame = -1

Query: 242 GFSIKSSAPSHT-HGVQPLGNLYLNPGTSTNSRDTGLGNLHALTDELVLDILGFLDGTCL 66
           GFS+K+SAPSH  +GVQPLGNLYLNPG S NSR+TGLGNLH LTDELVLDILG LDGT L
Sbjct: 56  GFSLKNSAPSHIFYGVQPLGNLYLNPG-SINSRNTGLGNLHTLTDELVLDILGLLDGTHL 114

Query: 65  GVLSSVSKSFYVFANHEPLWR 3
           G+L++VSKSFYVFANHEPLWR
Sbjct: 115 GILATVSKSFYVFANHEPLWR 135


>ref|XP_004164485.1| PREDICTED: F-box protein At5g06550-like isoform 2 [Cucumis sativus]
          Length = 425

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/80 (76%), Positives = 67/80 (83%)
 Frame = -1

Query: 242 GFSIKSSAPSHTHGVQPLGNLYLNPGTSTNSRDTGLGNLHALTDELVLDILGFLDGTCLG 63
           GF +KSSAPS  HGVQPLGNLYL  GT  N+R+ GLGN+  LTDELVLD+LGFLD T LG
Sbjct: 54  GFGLKSSAPSSNHGVQPLGNLYLASGT-INTRNIGLGNIQILTDELVLDVLGFLDATHLG 112

Query: 62  VLSSVSKSFYVFANHEPLWR 3
           VL+ VSKSFYVFANHEPLWR
Sbjct: 113 VLACVSKSFYVFANHEPLWR 132


>ref|XP_004164484.1| PREDICTED: F-box protein At5g06550-like isoform 1 [Cucumis sativus]
          Length = 512

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/80 (76%), Positives = 67/80 (83%)
 Frame = -1

Query: 242 GFSIKSSAPSHTHGVQPLGNLYLNPGTSTNSRDTGLGNLHALTDELVLDILGFLDGTCLG 63
           GF +KSSAPS  HGVQPLGNLYL  GT  N+R+ GLGN+  LTDELVLD+LGFLD T LG
Sbjct: 54  GFGLKSSAPSSNHGVQPLGNLYLASGT-INTRNIGLGNIQILTDELVLDVLGFLDATHLG 112

Query: 62  VLSSVSKSFYVFANHEPLWR 3
           VL+ VSKSFYVFANHEPLWR
Sbjct: 113 VLACVSKSFYVFANHEPLWR 132


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