BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022434
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628782.1| Pentatricopeptide repeat-containing protein ...   470   e-130
ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...   453   e-125
emb|CBI28135.3| unnamed protein product [Vitis vinifera]              390   e-106
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containi...   377   e-102

>ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355522804|gb|AET03258.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score =  470 bits (1210), Expect = e-130
 Identities = 248/356 (69%), Positives = 285/356 (80%), Gaps = 2/356 (0%)
 Frame = -1

Query: 1063 GVLEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTL 884
            GVLEDA+KVFDE+P +KRN V WNSMI  Y QNGMN EAV LF+KMR  G  VEP+ V+L
Sbjct: 258  GVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGG-VEPSEVSL 316

Query: 883  SGFLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRR- 707
            SGF SACANLEAV EG+QGHA  +L+GF+L  N +LGSSIMNFYSKVGLIEE ELVFR  
Sbjct: 317  SGFFSACANLEAVEEGKQGHALVILMGFEL--NYVLGSSIMNFYSKVGLIEEVELVFRSM 374

Query: 706  TVMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLGL 527
             V+KDEV WNL+ISSY +FG+ EKALEMC  MREE  LRFD VT+SSLLA+AAD RD+ L
Sbjct: 375  AVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKL 434

Query: 526  GKEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAA-KRDVVLWNTMLAACA 350
            GK+ HGFCI+N F +D+ V SGV+DMYAKCG M+ AR VF FA  K+D+VLWNTMLAACA
Sbjct: 435  GKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACA 494

Query: 349  ELGLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNL 170
            E GLSGEAL+LFFQMQ+E           +IFGFFRNGQVVEAQ MFSEM   SGV PNL
Sbjct: 495  EKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEM-QLSGVTPNL 553

Query: 169  VTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKYGRA 2
            +TWTT+ISGLAQNG  Y+A   F +MQG G+RPNS+SITS LSACT+MALL YGR+
Sbjct: 554  ITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRS 609



 Score =  123 bits (309), Expect = 7e-26
 Identities = 88/360 (24%), Positives = 168/360 (46%), Gaps = 35/360 (9%)
 Frame = -1

Query: 1018 KKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTLSGFLSACANLEAVIE 839
            K +N+ ++ +++ + A+NG+ +EA+  + +M   G    P+   +   L AC  L  +  
Sbjct: 168  KNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFC--PDNFVVPNGLKACGGLRWIGF 225

Query: 838  GRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRR--TVMKDEVMWNLIIS 665
            GR  H F V +G +      + +S+++ Y K G++E+AE VF       +++V+WN +I 
Sbjct: 226  GRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIV 285

Query: 664  SYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLGKEAHGFCIKNGFD 485
             Y + G+  +A+ +   MR E  +    V++S   +  A+   +  GK+ H   I  GF+
Sbjct: 286  GYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFE 345

Query: 484  ADVVVSSGVIDMYAKCGRMEIARRVF-GFAAKRDVVLWNTMLAACAELGLSGEALRLFFQ 308
             + V+ S +++ Y+K G +E    VF   A  +D V WN M+++  + G+  +AL +   
Sbjct: 346  LNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHW 405

Query: 307  MQLEXXXXXXXXXXXVIFGFFRNGQVVEAQK----------MFSEM-------------- 200
            M+ E            +     + + V+  K           +S+M              
Sbjct: 406  MREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCG 465

Query: 199  --------LHSSGVKPNLVTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTL 44
                     H +G K ++V W T+++  A+ G   +AL  F++MQ   + PN +S  S +
Sbjct: 466  IMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLI 525



 Score =  107 bits (268), Expect = 4e-21
 Identities = 85/343 (24%), Positives = 161/343 (46%)
 Frame = -1

Query: 1063 GVLEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTL 884
            G+++ A+ VF     KK+++V WN+M+A  A+ G++ EA+KLF +M++   SV PN V+ 
Sbjct: 465  GIMDCARGVF-HFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQME--SVPPNVVSW 521

Query: 883  SGFLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT 704
            +  +        V+E +   +   L G                                 
Sbjct: 522  NSLIFGFFRNGQVVEAQDMFSEMQLSG--------------------------------- 548

Query: 703  VMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLG 524
            V  + + W  +IS  A+ G+  +A  +   M + A +R +S++++S L+   +   L  G
Sbjct: 549  VTPNLITWTTMISGLAQNGLGYEASRVFQQM-QGAGMRPNSISITSALSACTNMALLNYG 607

Query: 523  KEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWNTMLAACAEL 344
            +  HG+ ++N     + +++ +IDMYAKCG ++ A+ VF   + +++ ++N M++A A  
Sbjct: 608  RSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASH 667

Query: 343  GLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNLVT 164
            G S EAL LF ++  +           V+        + E  ++F  M+    +KP+   
Sbjct: 668  GKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKH 727

Query: 163  WTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSAC 35
            +  L+  L  +G   +AL     M      P++  + S L+AC
Sbjct: 728  YGCLVKLLTNDGQLDEALRIILTMPS---PPDAHILGSLLAAC 767


>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
            chloroplastic-like [Glycine max]
          Length = 805

 Score =  453 bits (1165), Expect = e-125
 Identities = 236/354 (66%), Positives = 278/354 (78%)
 Frame = -1

Query: 1063 GVLEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTL 884
            G +EDA KVFDE+ E  RN V WNSM+  YAQNGMN+EA+++F++MRL G  VE   V L
Sbjct: 204  GAVEDAGKVFDEMSE--RNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQG--VEVTLVAL 259

Query: 883  SGFLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT 704
            SGF +ACAN EAV EGRQGH  AV+ G +L  +N+LGSSIMNFY KVGLIEEAE+VFR  
Sbjct: 260  SGFFTACANSEAVGEGRQGHGLAVVGGLEL--DNVLGSSIMNFYFKVGLIEEAEVVFRNM 317

Query: 703  VMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLG 524
             +KD V WNL+++ YA+FG+VEKALEMC +MREE  LRFD VT+S+LLAVAAD RDL LG
Sbjct: 318  AVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEG-LRFDCVTLSALLAVAADTRDLVLG 376

Query: 523  KEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWNTMLAACAEL 344
             +AH +C+KN F+ DVVVSSG+IDMYAKCGRM+ ARRVF    K+D+VLWNTMLAACAE 
Sbjct: 377  MKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQ 436

Query: 343  GLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNLVT 164
            GLSGEAL+LFFQMQLE           +IFGFF+NGQV EA+ MF+EM  SSGV PNL+T
Sbjct: 437  GLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMC-SSGVMPNLIT 495

Query: 163  WTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKYGRA 2
            WTT++SGL QNGF   A+M F  MQ  GIRPNSMSITS LS CT MALLK+GRA
Sbjct: 496  WTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRA 549



 Score =  118 bits (296), Expect = 2e-24
 Identities = 109/423 (25%), Positives = 188/423 (44%), Gaps = 72/423 (17%)
 Frame = -1

Query: 1063 GVLEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTL 884
            G++E+A+ VF  +  K  +VV WN ++A YAQ GM E+A+++   MR  G   +   VTL
Sbjct: 305  GLIEEAEVVFRNMAVK--DVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDC--VTL 360

Query: 883  SGFLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT 704
            S  L+  A+   ++ G + HA+ V   F+   + ++ S I++ Y+K G ++ A  VF   
Sbjct: 361  SALLAVAADTRDLVLGMKAHAYCVKNDFE--GDVVVSSGIIDMYAKCGRMDCARRVFSCV 418

Query: 703  VMKDEVM-----------------------------------WNLIISSYAKFGIVEKA- 632
              KD V+                                   WN +I  + K G V +A 
Sbjct: 419  RKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEAR 478

Query: 631  ---LEMC----------------------------LLMRE--EAKLRFDSVTVSSLLAVA 551
                EMC                            ++ RE  +  +R +S++++S L+  
Sbjct: 479  NMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGC 538

Query: 550  ADRRDLGLGKEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWN 371
                 L  G+  HG+ ++      + + + ++DMYAKCG ++ A+ VF   + +++ ++N
Sbjct: 539  TSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYN 598

Query: 370  TMLAACAELGLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHS 191
             M++A A  G + EAL LF QM+ E           V+      G + E  K+F  M+  
Sbjct: 599  AMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSE 658

Query: 190  SGVKPNLVTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSAC---TDMAL 20
              +KP+   +  L+  LA +G   +AL     M      P++  + S L+AC    D+ L
Sbjct: 659  LQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPS---HPDAHILGSLLTACGQNNDIEL 715

Query: 19   LKY 11
              Y
Sbjct: 716  ADY 718



 Score =  105 bits (262), Expect = 2e-20
 Identities = 91/357 (25%), Positives = 158/357 (44%), Gaps = 36/357 (10%)
 Frame = -1

Query: 970  QNGMNEEAVKLFKKMRLHGSSVEPNPVTLSGFLSACANLEAVIEGRQGHAFAVLLGFDLG 791
            ++G   EAV    +M  H  ++   P      L  C    A+    Q HA  +  G    
Sbjct: 28   KHGRIREAVNSLTQM--HSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFA 85

Query: 790  NNNILGSSIMNFYSKVGLIEEAELVFRRTVMKDEVMWNLIISSYAKFGIVEKALEMCLLM 611
             N+ + S ++  Y+K G  E A  +FR +   +   W  II  + + G  E+AL   + M
Sbjct: 86   LNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKM 145

Query: 610  REEAKLRFDSVTVSSLLAVAADRRDLGLGKEAHGFCIKN-GFDADVVVSSGVIDMYAKCG 434
            +++  L  D+  + ++L      + +  GK  H F +K  G    V V++ ++DMY KCG
Sbjct: 146  QQDG-LPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCG 204

Query: 433  RMEIARRVFGFAAKRDVVLWNTMLAACAELGLSGEALRLFFQMQL--------------- 299
             +E A +VF   ++R+ V WN+M+   A+ G++ EA+R+F +M+L               
Sbjct: 205  AVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFT 264

Query: 298  -----EXXXXXXXXXXXVIFG---------------FFRNGQVVEAQKMFSEMLHSSGVK 179
                 E            + G               +F+ G + EA+ +F  M     VK
Sbjct: 265  ACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNM----AVK 320

Query: 178  PNLVTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKYG 8
             ++VTW  +++G AQ G    AL     M+  G+R + +++++ L+   D   L  G
Sbjct: 321  -DVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLG 376


>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  390 bits (1003), Expect = e-106
 Identities = 210/354 (59%), Positives = 265/354 (74%)
 Frame = -1

Query: 1063 GVLEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTL 884
            GVLEDA+KVFD + EK  NVV WNSMI  Y QNG+N+EA+ +F  MR+ G  +EP  VT+
Sbjct: 1326 GVLEDARKVFDSMVEK--NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEG--IEPTRVTV 1381

Query: 883  SGFLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT 704
            + FLSA ANL+A+IEG+QGHA A+L   DL  +NILGSSI+NFYSKVGLIE+AELVF R 
Sbjct: 1382 ASFLSASANLDALIEGKQGHAIAILNSLDL--DNILGSSIINFYSKVGLIEDAELVFSRM 1439

Query: 703  VMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLG 524
            + KD V WNL+ISSY +   V KAL MC LMR E  LRFDSVT+SS+L+ +A   ++ LG
Sbjct: 1440 LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSE-NLRFDSVTLSSILSASAVTSNIKLG 1498

Query: 523  KEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWNTMLAACAEL 344
            KE H +CI+   ++DVVV++ +IDMYAKC R++ AR+VF    +RD+VLWNT+LAA A++
Sbjct: 1499 KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 1558

Query: 343  GLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNLVT 164
            GLSGEAL+LF+QMQ +           VI GF RNGQV EA+ MFS+M  S G +PNL+T
Sbjct: 1559 GLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLIT 1617

Query: 163  WTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKYGRA 2
            WTTLISGLAQ+GF Y+A++ F +MQ  GIRP+  SITS L ACTD+  L YGRA
Sbjct: 1618 WTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRA 1671



 Score =  124 bits (312), Expect = 3e-26
 Identities = 96/362 (26%), Positives = 163/362 (45%), Gaps = 35/362 (9%)
 Frame = -1

Query: 985  IAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTLSGFLSACANLEAVIEGRQGHAFAVLL 806
            I+   ++G  +E+V L  +M      + P        L  C    A+  G+Q HA  +  
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPE--IYGELLQGCVYERALHTGQQIHARILKN 1203

Query: 805  GFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRTVMKDEVMWNLIISSYAKFGIVEKALE 626
            G     N  + + ++ FY+K    E A  +F R  +++   W  I+    + G  E AL 
Sbjct: 1204 GDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALL 1263

Query: 625  MCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLGKEAHGFCIKNGFDADVVVSSGVIDMY 446
              + M+E      D+  + ++L      + +GLGK  HG+ +K GF A V VSS ++DMY
Sbjct: 1264 GFIEMQENGVFP-DNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMY 1322

Query: 445  AKCGRMEIARRVFGFAAKRDVVLWNTMLAACAELGLSGEALRLFFQMQLE---------- 296
             KCG +E AR+VF    +++VV WN+M+    + GL+ EA+ +F+ M++E          
Sbjct: 1323 GKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 1382

Query: 295  ------------------------XXXXXXXXXXXVIFGFF-RNGQVVEAQKMFSEMLHS 191
                                                I  F+ + G + +A+ +FS ML  
Sbjct: 1383 SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML-- 1440

Query: 190  SGVKPNLVTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKY 11
               + ++VTW  LIS   Q+     AL     M+   +R +S++++S LSA    + +K 
Sbjct: 1441 ---EKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKL 1497

Query: 10   GR 5
            G+
Sbjct: 1498 GK 1499



 Score =  123 bits (308), Expect = 9e-26
 Identities = 95/354 (26%), Positives = 173/354 (48%), Gaps = 4/354 (1%)
 Frame = -1

Query: 1057 LEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTLSG 878
            ++DA+KVFD   E  R++V WN+++A YAQ G++ EA+KLF +M+    SV PN ++ + 
Sbjct: 1530 IDDARKVFDSTTE--RDLVLWNTLLAAYAQVGLSGEALKLFYQMQF--DSVPPNVISWN- 1584

Query: 877  FLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT-- 704
                                +V+LGF                 + G + EA+ +F +   
Sbjct: 1585 --------------------SVILGF----------------LRNGQVNEAKDMFSQMQS 1608

Query: 703  --VMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLG 530
                 + + W  +IS  A+ G   +A+     M +EA +R    +++S+L    D   L 
Sbjct: 1609 LGFQPNLITWTTLISGLAQSGFGYEAILFFQKM-QEAGIRPSIASITSVLLACTDIPSLW 1667

Query: 529  LGKEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWNTMLAACA 350
             G+  HGF  ++ F   V V++ ++DMYAKCG ++ A++VF   + +++ ++N M++A A
Sbjct: 1668 YGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYA 1727

Query: 349  ELGLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNL 170
              G + EAL LF  +Q E           ++      G V E   +F++M+    + P +
Sbjct: 1728 LHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIM 1787

Query: 169  VTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKYG 8
              +  ++S L++ G   +AL     M     +P++  + S L+AC +   ++ G
Sbjct: 1788 EHYGCVVSLLSRCGNLDEALRLILTMP---FQPDAHILGSLLTACREHHEIELG 1838


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
            chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  390 bits (1003), Expect = e-106
 Identities = 210/354 (59%), Positives = 265/354 (74%)
 Frame = -1

Query: 1063 GVLEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTL 884
            GVLEDA+KVFD + EK  NVV WNSMI  Y QNG+N+EA+ +F  MR+ G  +EP  VT+
Sbjct: 231  GVLEDARKVFDSMVEK--NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEG--IEPTRVTV 286

Query: 883  SGFLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT 704
            + FLSA ANL+A+IEG+QGHA A+L   DL  +NILGSSI+NFYSKVGLIE+AELVF R 
Sbjct: 287  ASFLSASANLDALIEGKQGHAIAILNSLDL--DNILGSSIINFYSKVGLIEDAELVFSRM 344

Query: 703  VMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLG 524
            + KD V WNL+ISSY +   V KAL MC LMR E  LRFDSVT+SS+L+ +A   ++ LG
Sbjct: 345  LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSE-NLRFDSVTLSSILSASAVTSNIKLG 403

Query: 523  KEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWNTMLAACAEL 344
            KE H +CI+   ++DVVV++ +IDMYAKC R++ AR+VF    +RD+VLWNT+LAA A++
Sbjct: 404  KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 463

Query: 343  GLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNLVT 164
            GLSGEAL+LF+QMQ +           VI GF RNGQV EA+ MFS+M  S G +PNL+T
Sbjct: 464  GLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLIT 522

Query: 163  WTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKYGRA 2
            WTTLISGLAQ+GF Y+A++ F +MQ  GIRP+  SITS L ACTD+  L YGRA
Sbjct: 523  WTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRA 576



 Score =  124 bits (312), Expect = 3e-26
 Identities = 96/362 (26%), Positives = 163/362 (45%), Gaps = 35/362 (9%)
 Frame = -1

Query: 985  IAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTLSGFLSACANLEAVIEGRQGHAFAVLL 806
            I+   ++G  +E+V L  +M      + P        L  C    A+  G+Q HA  +  
Sbjct: 51   ISSLCKDGHLQESVHLLSEMEFEDFQIGPE--IYGELLQGCVYERALHTGQQIHARILKN 108

Query: 805  GFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRTVMKDEVMWNLIISSYAKFGIVEKALE 626
            G     N  + + ++ FY+K    E A  +F R  +++   W  I+    + G  E AL 
Sbjct: 109  GDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALL 168

Query: 625  MCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLGKEAHGFCIKNGFDADVVVSSGVIDMY 446
              + M+E      D+  + ++L      + +GLGK  HG+ +K GF A V VSS ++DMY
Sbjct: 169  GFIEMQENGVFP-DNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMY 227

Query: 445  AKCGRMEIARRVFGFAAKRDVVLWNTMLAACAELGLSGEALRLFFQMQLE---------- 296
             KCG +E AR+VF    +++VV WN+M+    + GL+ EA+ +F+ M++E          
Sbjct: 228  GKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 287

Query: 295  ------------------------XXXXXXXXXXXVIFGFF-RNGQVVEAQKMFSEMLHS 191
                                                I  F+ + G + +A+ +FS ML  
Sbjct: 288  SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML-- 345

Query: 190  SGVKPNLVTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKY 11
               + ++VTW  LIS   Q+     AL     M+   +R +S++++S LSA    + +K 
Sbjct: 346  ---EKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKL 402

Query: 10   GR 5
            G+
Sbjct: 403  GK 404



 Score =  123 bits (308), Expect = 9e-26
 Identities = 95/354 (26%), Positives = 173/354 (48%), Gaps = 4/354 (1%)
 Frame = -1

Query: 1057 LEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTLSG 878
            ++DA+KVFD   E  R++V WN+++A YAQ G++ EA+KLF +M+    SV PN ++ + 
Sbjct: 435  IDDARKVFDSTTE--RDLVLWNTLLAAYAQVGLSGEALKLFYQMQF--DSVPPNVISWN- 489

Query: 877  FLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT-- 704
                                +V+LGF                 + G + EA+ +F +   
Sbjct: 490  --------------------SVILGF----------------LRNGQVNEAKDMFSQMQS 513

Query: 703  --VMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLG 530
                 + + W  +IS  A+ G   +A+     M +EA +R    +++S+L    D   L 
Sbjct: 514  LGFQPNLITWTTLISGLAQSGFGYEAILFFQKM-QEAGIRPSIASITSVLLACTDIPSLW 572

Query: 529  LGKEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWNTMLAACA 350
             G+  HGF  ++ F   V V++ ++DMYAKCG ++ A++VF   + +++ ++N M++A A
Sbjct: 573  YGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYA 632

Query: 349  ELGLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNL 170
              G + EAL LF  +Q E           ++      G V E   +F++M+    + P +
Sbjct: 633  LHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIM 692

Query: 169  VTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKYG 8
              +  ++S L++ G   +AL     M     +P++  + S L+AC +   ++ G
Sbjct: 693  EHYGCVVSLLSRCGNLDEALRLILTMP---FQPDAHILGSLLTACREHHEIELG 743


>ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
            chloroplastic-like [Cucumis sativus]
            gi|449520209|ref|XP_004167126.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g55740,
            chloroplastic-like [Cucumis sativus]
          Length = 840

 Score =  377 bits (968), Expect = e-102
 Identities = 199/354 (56%), Positives = 257/354 (72%)
 Frame = -1

Query: 1063 GVLEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTL 884
            G+ E+AKKVFD+I EK  N+VAWNSMI  + QNG+N EAV+ F +MR+ G  V P  VTL
Sbjct: 230  GLCEEAKKVFDKILEK--NIVAWNSMIVNFTQNGLNAEAVETFYEMRVEG--VAPTQVTL 285

Query: 883  SGFLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT 704
            S FLSA ANL  + EG+QGHA AVL G +L   NILGSS++NFYSKVGL+E+AELVF   
Sbjct: 286  SSFLSASANLSVIDEGKQGHALAVLSGLEL--TNILGSSLINFYSKVGLVEDAELVFSEM 343

Query: 703  VMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLG 524
            + KD V WNL++S Y   G+V++AL++C +M+ E  LRFDSVT++S++A AAD R+L LG
Sbjct: 344  LEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSE-NLRFDSVTLASIMAAAADSRNLKLG 402

Query: 523  KEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWNTMLAACAEL 344
            KE H FC++N  ++DV V+S +IDMYAKC ++E ARRVF   AKRD+++WNT+LAA AE 
Sbjct: 403  KEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQ 462

Query: 343  GLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNLVT 164
            G SGE L+LF+QMQLE           VI G    G+V +A+  F EM  S G+ PNL+T
Sbjct: 463  GHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEM-QSLGICPNLIT 521

Query: 163  WTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKYGRA 2
            WTTLI GLAQNG   +A + F  M+  GI+PNS+SI+S LSAC+ MA L +GRA
Sbjct: 522  WTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRA 575



 Score =  119 bits (297), Expect = 2e-24
 Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 35/362 (9%)
 Frame = -1

Query: 985  IAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTLSGFLSACANLEAVIEGRQGHAFAVLL 806
            I+   + G   EA+ L   + L   ++ P+       L  C    A+  G+Q H   +  
Sbjct: 50   ISSLCKQGHLLEALDLVTDLELEDITIGPD--VYGELLQGCVYERALSLGQQIHGRILKN 107

Query: 805  GFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRTVMKDEVMWNLIISSYAKFGIVEKALE 626
            G  +  N  + + ++ FYSK    E A  +F +  +++E  W  I+   ++ G  ++AL 
Sbjct: 108  GESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEAL- 166

Query: 625  MCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLGKEAHGFCIKNGFDADVVVSSGVIDMY 446
            M      E  L  D+  +      +   R +G GK  H + +K G    + V++ ++DMY
Sbjct: 167  MGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMY 226

Query: 445  AKCGRMEIARRVFGFAAKRDVVLWNTMLAACAELGLSGEALRLFFQMQLEXXXXXXXXXX 266
             KCG  E A++VF    ++++V WN+M+    + GL+ EA+  F++M++E          
Sbjct: 227  GKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLS 286

Query: 265  XVIFG-----------------------------------FFRNGQVVEAQKMFSEMLHS 191
              +                                     + + G V +A+ +FSEML  
Sbjct: 287  SFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEML-- 344

Query: 190  SGVKPNLVTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKY 11
               + + VTW  L+SG   NG    AL     MQ   +R +S+++ S ++A  D   LK 
Sbjct: 345  ---EKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKL 401

Query: 10   GR 5
            G+
Sbjct: 402  GK 403



 Score =  104 bits (260), Expect = 3e-20
 Identities = 90/361 (24%), Positives = 180/361 (49%), Gaps = 9/361 (2%)
 Frame = -1

Query: 1063 GVLEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTL 884
            G++EDA+ VF E+ EK  + V WN +++ Y  NG+ + A+ L   M+    ++  + VTL
Sbjct: 331  GLVEDAELVFSEMLEK--DTVTWNLLVSGYVHNGLVDRALDLCHVMQ--SENLRFDSVTL 386

Query: 883  SGFLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRT 704
            +  ++A A+   +  G++GH+F V    +L ++  + SSI++ Y+K   +E A  VF  T
Sbjct: 387  ASIMAAAADSRNLKLGKEGHSFCVRN--NLESDVAVASSIIDMYAKCEKLECARRVFDAT 444

Query: 703  VMKDEVMWNLIISSYAKFGIVEKALEMCLLMREEAK----LRFDSVTVSSLLAVAADR-R 539
              +D +MWN ++++YA+ G   + L++   M+ E      + ++SV +  L     D+ +
Sbjct: 445  AKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAK 504

Query: 538  DLGLGKEAHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGF----AAKRDVVLWN 371
            D  +  ++ G C       +++  + +I   A+ G  + A   F        K + +  +
Sbjct: 505  DTFMEMQSLGIC------PNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSIS 558

Query: 370  TMLAACAELGLSGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHS 191
            ++L+AC+ +        +   +              ++  + + G + +A+++F  +L  
Sbjct: 559  SLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMIL-- 616

Query: 190  SGVKPNLVTWTTLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTDMALLKY 11
               K  L  +  +ISG A +G   +AL  F R++   I+P+ ++ TS LSAC    L++ 
Sbjct: 617  ---KKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVRE 673

Query: 10   G 8
            G
Sbjct: 674  G 674



 Score =  102 bits (254), Expect = 2e-19
 Identities = 81/343 (23%), Positives = 157/343 (45%)
 Frame = -1

Query: 1057 LEDAKKVFDEIPEKKRNVVAWNSMIAVYAQNGMNEEAVKLFKKMRLHGSSVEPNPVTLSG 878
            LE A++VFD     KR+++ WN+++A YA+ G + E +KLF +M+L G  + PN ++ + 
Sbjct: 434  LECARRVFDATA--KRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEG--LPPNVISWNS 489

Query: 877  FLSACANLEAVIEGRQGHAFAVLLGFDLGNNNILGSSIMNFYSKVGLIEEAELVFRRTVM 698
             +    N   V + +        LG                                 + 
Sbjct: 490  VILGLLNKGKVDQAKDTFMEMQSLG---------------------------------IC 516

Query: 697  KDEVMWNLIISSYAKFGIVEKALEMCLLMREEAKLRFDSVTVSSLLAVAADRRDLGLGKE 518
             + + W  +I   A+ G+ ++A  +     EEA ++ +S+++SSLL+  +    L  G+ 
Sbjct: 517  PNLITWTTLICGLAQNGLGDEAF-LTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRA 575

Query: 517  AHGFCIKNGFDADVVVSSGVIDMYAKCGRMEIARRVFGFAAKRDVVLWNTMLAACAELGL 338
             H +  ++       V   +++MYAKCG +  A+RVF    K+++ ++N M++  A  G 
Sbjct: 576  IHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQ 635

Query: 337  SGEALRLFFQMQLEXXXXXXXXXXXVIFGFFRNGQVVEAQKMFSEMLHSSGVKPNLVTWT 158
            + EAL LF +++ E           ++      G V E  ++F +M+ +  +      + 
Sbjct: 636  AVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYG 695

Query: 157  TLISGLAQNGFCYDALMAFWRMQGFGIRPNSMSITSTLSACTD 29
             L+S L+++    +AL     + G    P++    S L+AC +
Sbjct: 696  CLVSILSRSHNLDEALRI---ILGMPFEPDAFIFGSLLAACRE 735