BLASTX nr result

ID: Glycyrrhiza24_contig00022393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022393
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602090.1| Ribonuclease J [Medicago truncatula] gi|3554...   173   3e-41
ref|XP_003522430.1| PREDICTED: ribonuclease J-like [Glycine max]      166   6e-39
ref|XP_003550865.1| PREDICTED: ribonuclease J-like [Glycine max]      159   6e-37
ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]      157   2e-36
ref|XP_002318122.1| predicted protein [Populus trichocarpa] gi|2...   155   8e-36

>ref|XP_003602090.1| Ribonuclease J [Medicago truncatula] gi|355491138|gb|AES72341.1|
            Ribonuclease J [Medicago truncatula]
          Length = 959

 Score =  173 bits (439), Expect = 3e-41
 Identities = 82/101 (81%), Positives = 92/101 (91%)
 Frame = -3

Query: 725  SSKSVKRNKWKTEEVKKLIDLRSELHDRFKVVKGRMALWEEISQSLLADGVSRSPGQCKS 546
            SSKS K+NKWKTEEVKKLIDLRS+L DRFKVVKGRMALWEEISQSLLADG+SRSPGQCKS
Sbjct: 778  SSKSEKKNKWKTEEVKKLIDLRSDLRDRFKVVKGRMALWEEISQSLLADGISRSPGQCKS 837

Query: 545  LWTSLVQKYEEIENGKDKKKSWQYLEDMRRIMSNDEAAATK 423
            LWTSL  KYEEI+NGKD +K+WQYLEDM RI+S+DE  + +
Sbjct: 838  LWTSLALKYEEIKNGKDSRKNWQYLEDMERILSSDETPSDR 878


>ref|XP_003522430.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 888

 Score =  166 bits (419), Expect = 6e-39
 Identities = 81/100 (81%), Positives = 87/100 (87%)
 Frame = -3

Query: 722  SKSVKRNKWKTEEVKKLIDLRSELHDRFKVVKGRMALWEEISQSLLADGVSRSPGQCKSL 543
            SKSVKRNKWKTEEVKKLI +R EL DRF+VVKGRMALWEEISQ LLADG+SRSPGQCKSL
Sbjct: 789  SKSVKRNKWKTEEVKKLIGMRGELSDRFQVVKGRMALWEEISQKLLADGISRSPGQCKSL 848

Query: 542  WTSLVQKYEEIENGKDKKKSWQYLEDMRRIMSNDEAAATK 423
            WTSLV KYE I+N  D KKSW Y+EDM RIMS+ EA ATK
Sbjct: 849  WTSLVVKYEGIKNKNDSKKSWPYIEDMERIMSDKEAPATK 888


>ref|XP_003550865.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 886

 Score =  159 bits (402), Expect = 6e-37
 Identities = 74/101 (73%), Positives = 88/101 (87%)
 Frame = -3

Query: 725  SSKSVKRNKWKTEEVKKLIDLRSELHDRFKVVKGRMALWEEISQSLLADGVSRSPGQCKS 546
            SSKS KRNKWK EEVKKLID+R EL+DRF+VVKGRMALWEEISQ+LLA+G+SRSPGQCKS
Sbjct: 786  SSKSAKRNKWKHEEVKKLIDMRGELNDRFQVVKGRMALWEEISQNLLANGISRSPGQCKS 845

Query: 545  LWTSLVQKYEEIENGKDKKKSWQYLEDMRRIMSNDEAAATK 423
            LWTSL+QKYEE++N K  KK W Y EDM RI+++++   TK
Sbjct: 846  LWTSLLQKYEEVKNEKKNKKKWPYFEDMERILADNKTLETK 886


>ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 874

 Score =  157 bits (397), Expect = 2e-36
 Identities = 78/99 (78%), Positives = 87/99 (87%)
 Frame = -3

Query: 725  SSKSVKRNKWKTEEVKKLIDLRSELHDRFKVVKGRMALWEEISQSLLADGVSRSPGQCKS 546
            SSKSVKRNKWKTEEVKKLI +R EL +RF+VVKGRMALWEEISQ LLADG+ RSPGQCKS
Sbjct: 776  SSKSVKRNKWKTEEVKKLIGMREELSERFQVVKGRMALWEEISQKLLADGICRSPGQCKS 835

Query: 545  LWTSLVQKYEEIENGKDKKKSWQYLEDMRRIMSNDEAAA 429
            LWTSLV KYE I+N +D+KKSW Y+EDM RIMS+ EA A
Sbjct: 836  LWTSLVVKYEGIKN-EDRKKSWPYIEDMERIMSDKEAPA 873


>ref|XP_002318122.1| predicted protein [Populus trichocarpa] gi|222858795|gb|EEE96342.1|
            predicted protein [Populus trichocarpa]
          Length = 890

 Score =  155 bits (392), Expect = 8e-36
 Identities = 73/100 (73%), Positives = 84/100 (84%)
 Frame = -3

Query: 722  SKSVKRNKWKTEEVKKLIDLRSELHDRFKVVKGRMALWEEISQSLLADGVSRSPGQCKSL 543
            SKSVKRNKWK EEVK LI +R ELH RF+VV+GRMALWEEIS +L+ADG++RSPGQCKSL
Sbjct: 791  SKSVKRNKWKPEEVKSLIKMRGELHSRFQVVRGRMALWEEISTNLMADGINRSPGQCKSL 850

Query: 542  WTSLVQKYEEIENGKDKKKSWQYLEDMRRIMSNDEAAATK 423
            WTSLVQKYEE +NGK  KK+W Y EDM  I+S+ E  ATK
Sbjct: 851  WTSLVQKYEESKNGKKGKKAWPYFEDMDNILSDSETMATK 890


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