BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022391
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphat...   159   6e-37
ref|XP_003551805.1| PREDICTED: RNA polymerase II C-terminal doma...   158   1e-36
ref|XP_003530482.1| PREDICTED: RNA polymerase II C-terminal doma...   155   8e-36
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   115   9e-24
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...   115   9e-24

>ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula] gi|355496659|gb|AES77862.1| RNA
           polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula]
          Length = 1213

 Score =  159 bits (402), Expect = 6e-37
 Identities = 86/142 (60%), Positives = 95/142 (66%), Gaps = 14/142 (9%)
 Frame = +1

Query: 286 MVFGSFLDCAKLNNPDEMGKGVEDVEEGEISDAASVEEISEEDFXXXXXXXXXXXXXXPK 465
           MVFGS LD     N  EMGK VEDVEEGEISD+AS+EEI+EEDF                
Sbjct: 1   MVFGSLLDFEISKNLIEMGKEVEDVEEGEISDSASLEEITEEDFKKGDDVKVNNSDVKTD 60

Query: 466 S--------------GDARVWAVHDLYSKYPSICRGYASGLYNLAWAQAVQNKPLNDIFV 603
                          GD+RVWAV DLYSKYP+ICRGYASGLYNLAWAQAVQNKPLNDIFV
Sbjct: 61  KSDNKVKTGGGGGGGGDSRVWAVQDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFV 120

Query: 604 MELDSDANANGNNNRSSCGSVN 669
           MELD +ANAN NN+ +  G +N
Sbjct: 121 MELDKNANANSNNSGNKDGELN 142


>ref|XP_003551805.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Glycine max]
          Length = 1221

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/106 (75%), Positives = 84/106 (79%)
 Frame = +1

Query: 337 MGKGVEDVEEGEISDAASVEEISEEDFXXXXXXXXXXXXXXPKSGDARVWAVHDLYSKYP 516
           MGK VEDVEEGEISD ASVEEIS EDF              P   DARVWAVHDLYSKYP
Sbjct: 1   MGKEVEDVEEGEISDTASVEEISAEDFNKQDVKVLNNNNK-PNGSDARVWAVHDLYSKYP 59

Query: 517 SICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDANANGNNNRSS 654
           +ICRGYASGLYNLAWAQAVQNKPLNDIFVME+DSDANAN N+N S+
Sbjct: 60  TICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNSNNSN 105


>ref|XP_003530482.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Glycine max]
          Length = 1244

 Score =  155 bits (392), Expect = 8e-36
 Identities = 79/105 (75%), Positives = 81/105 (77%)
 Frame = +1

Query: 337 MGKGVEDVEEGEISDAASVEEISEEDFXXXXXXXXXXXXXXPKSGDARVWAVHDLYSKYP 516
           MGK  EDVEEGEISD ASVEEIS EDF              P   DARVWAVHDLYSKYP
Sbjct: 1   MGKEAEDVEEGEISDTASVEEISAEDFNKQDVKLLNNNNK-PNGSDARVWAVHDLYSKYP 59

Query: 517 SICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDANANGNNNRS 651
           +ICRGYASGLYNLAWAQAVQNKPLNDIFVME+DSDANAN N N S
Sbjct: 60  TICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNRNSS 104


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score =  115 bits (288), Expect = 9e-24
 Identities = 62/107 (57%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
 Frame = +1

Query: 331 DEMGKGVEDVEEGEISDAASVEEISEEDFXXXXXXXXXXXXXXPKSG--DARVWAVHDLY 504
           DE+ K +EDVEEGEISD ASVEEISEEDF               K    + RVW + DLY
Sbjct: 4   DEILK-IEDVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSKDSNRETRVWTMSDLY 62

Query: 505 SKYPSICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDANANGNNN 645
             YP++  GYASGLYNLAWAQAVQNKPLNDIFVME D D  +  +++
Sbjct: 63  KNYPAMRHGYASGLYNLAWAQAVQNKPLNDIFVMEADLDEKSKHSSS 109


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Cucumis sativus]
          Length = 1249

 Score =  115 bits (288), Expect = 9e-24
 Identities = 62/107 (57%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
 Frame = +1

Query: 331 DEMGKGVEDVEEGEISDAASVEEISEEDFXXXXXXXXXXXXXXPKSG--DARVWAVHDLY 504
           DE+ K +EDVEEGEISD ASVEEISEEDF               K    + RVW + DLY
Sbjct: 4   DEILK-IEDVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSKDSNRETRVWTMSDLY 62

Query: 505 SKYPSICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDANANGNNN 645
             YP++  GYASGLYNLAWAQAVQNKPLNDIFVME D D  +  +++
Sbjct: 63  KNYPAMRHGYASGLYNLAWAQAVQNKPLNDIFVMEADLDEKSKHSSS 109