BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022372
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...   470   e-130
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...   462   e-128
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   428   e-118
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              428   e-118
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...   405   e-111

>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 631

 Score =  470 bits (1210), Expect = e-130
 Identities = 232/296 (78%), Positives = 249/296 (84%)
 Frame = -1

Query: 888  WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
            WN++I GY MHGL   AL  F+ M+K   +PD+ITFV  L+ACS   L+  G  L++ MV
Sbjct: 329  WNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMV 387

Query: 708  TEFWIEPDVEHYACMVDLLGHCGKLDEAYDLIRHMSVMPDSGVWGALLNSCKIHGNVXXX 529
             +  I P VEHY CMVDLLGHCG+LDEAYDLIR M VMPDSGVWGALLNSCK HGNV   
Sbjct: 388  RDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELA 447

Query: 528  XXXXXXXXXXEPDDSGNYVVLANMYAQSGNWEGVERLRQLMIDKGIKKNIACSWIEVKNK 349
                      EPDDSGNYV+LANMYAQSG WEGV RLRQLMIDKGIKKNIACSWIEVKNK
Sbjct: 448  EVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNK 507

Query: 348  VYAFLSGDVSHPDSGAIHAELKRLEGLMHEAGYVPDTGSVFHDVEEDEKTNMVCSHSERL 169
            VYAFLSGDVSHP+SGAI+AELKRLEGLM EAGYVPDTGSVFHDVEEDEKT+MVCSHSERL
Sbjct: 508  VYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERL 567

Query: 168  AIAFGLISTAPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKHG 1
            AIAFGLIST PGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHF+HG
Sbjct: 568  AIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHG 623



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 38/116 (32%), Positives = 62/116 (53%)
 Frame = -1

Query: 888 WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
           WN LI  Y  +G  E A+  + +M++ GLKPDN T   VL ACS    +  G  + +R++
Sbjct: 127 WNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVI 186

Query: 708 TEFWIEPDVEHYACMVDLLGHCGKLDEAYDLIRHMSVMPDSGVWGALLNSCKIHGN 541
              W E DV   A +VD+   CG + +A  +   + V  D+ +W ++L +   +G+
Sbjct: 187 RSGW-ERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAAYAQNGH 240


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical
            [Medicago truncatula] gi|355486783|gb|AES67986.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 620

 Score =  462 bits (1188), Expect = e-128
 Identities = 227/296 (76%), Positives = 250/296 (84%)
 Frame = -1

Query: 888  WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
            WN++I GY MHGL   AL  FD+M K   +PD+ITFV VL+ACS   L+  G  L++ MV
Sbjct: 318  WNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMV 376

Query: 708  TEFWIEPDVEHYACMVDLLGHCGKLDEAYDLIRHMSVMPDSGVWGALLNSCKIHGNVXXX 529
             ++ I P V+HY CM+DLLGHCG+LDEAYDLIR+MSV PDSGVWGALLNSCKIHGNV   
Sbjct: 377  RDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELA 436

Query: 528  XXXXXXXXXXEPDDSGNYVVLANMYAQSGNWEGVERLRQLMIDKGIKKNIACSWIEVKNK 349
                      EPDDSGNYV+LANMYAQSG WEGVE+LRQ+MIDK IKKNIACSWIEVKNK
Sbjct: 437  ELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNK 496

Query: 348  VYAFLSGDVSHPDSGAIHAELKRLEGLMHEAGYVPDTGSVFHDVEEDEKTNMVCSHSERL 169
            VYAFL+GDVSH +S AI+AELKRLEGLMHEAGY PDTGSVFHDVEEDEKT+MVCSHSERL
Sbjct: 497  VYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERL 556

Query: 168  AIAFGLISTAPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKHG 1
            AIAFGLIST+PGTRLLITKNLRICEDCHVAIKFISKI EREITVRDVNRYH FKHG
Sbjct: 557  AIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHG 612



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
 Frame = -1

Query: 888 WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
           WN LI GY  +G  +NA+  + +M+  GL+PDN T   VL ACS    +  G  + + ++
Sbjct: 116 WNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVI 175

Query: 708 TEFWIEPDVEHYACMVDLLGHCGKLDEA---YDLIRHMSVMPDSGVWGALLNSCKIHGN 541
              W E D+   A ++D+   CG + +A   +D I    V+ D+ +W ++L +   +G+
Sbjct: 176 KSGW-ERDLFVGAALIDMYAKCGCVMDAGRVFDKI----VVRDAVLWNSMLAAYAQNGH 229


>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Vitis vinifera]
          Length = 648

 Score =  428 bits (1100), Expect = e-118
 Identities = 208/296 (70%), Positives = 239/296 (80%)
 Frame = -1

Query: 888  WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
            WN++I GY MHG    AL  F+EM +   KPD+ITFV VLSACSH GL+  G   F+ M+
Sbjct: 346  WNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMI 404

Query: 708  TEFWIEPDVEHYACMVDLLGHCGKLDEAYDLIRHMSVMPDSGVWGALLNSCKIHGNVXXX 529
             ++ I+P V+HY CMVDLLGH G+LDEAY+LI  M V+PDSGVWGALLNSCKIH NV   
Sbjct: 405  RDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELG 464

Query: 528  XXXXXXXXXXEPDDSGNYVVLANMYAQSGNWEGVERLRQLMIDKGIKKNIACSWIEVKNK 349
                      EPDD+GNYV+L+N+YAQ+G WEGV +LR+LM D+ +KK+IACSWIEVKNK
Sbjct: 465  EIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNK 524

Query: 348  VYAFLSGDVSHPDSGAIHAELKRLEGLMHEAGYVPDTGSVFHDVEEDEKTNMVCSHSERL 169
            V+AFLSGD SHP S  I++EL+R+ GLM EAGY P TGSVFHDVE+DEK NMVCSHSERL
Sbjct: 525  VHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERL 584

Query: 168  AIAFGLISTAPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKHG 1
            AIAFGLIST PGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFK G
Sbjct: 585  AIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDG 640



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 37/116 (31%), Positives = 62/116 (53%)
 Frame = -1

Query: 888 WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
           WN LI GY  +G  E A++ + +M   GL PDN TF  VL AC+    +  G ++ + +V
Sbjct: 144 WNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVV 203

Query: 708 TEFWIEPDVEHYACMVDLLGHCGKLDEAYDLIRHMSVMPDSGVWGALLNSCKIHGN 541
              W E DV   A ++D+   CG +  A ++   + V  D+ +W ++L +   +G+
Sbjct: 204 QTGW-EKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLWNSMLAAYSQNGH 257


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  428 bits (1100), Expect = e-118
 Identities = 208/296 (70%), Positives = 239/296 (80%)
 Frame = -1

Query: 888  WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
            WN++I GY MHG    AL  F+EM +   KPD+ITFV VLSACSH GL+  G   F+ M+
Sbjct: 248  WNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMI 306

Query: 708  TEFWIEPDVEHYACMVDLLGHCGKLDEAYDLIRHMSVMPDSGVWGALLNSCKIHGNVXXX 529
             ++ I+P V+HY CMVDLLGH G+LDEAY+LI  M V+PDSGVWGALLNSCKIH NV   
Sbjct: 307  RDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELG 366

Query: 528  XXXXXXXXXXEPDDSGNYVVLANMYAQSGNWEGVERLRQLMIDKGIKKNIACSWIEVKNK 349
                      EPDD+GNYV+L+N+YAQ+G WEGV +LR+LM D+ +KK+IACSWIEVKNK
Sbjct: 367  EIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNK 426

Query: 348  VYAFLSGDVSHPDSGAIHAELKRLEGLMHEAGYVPDTGSVFHDVEEDEKTNMVCSHSERL 169
            V+AFLSGD SHP S  I++EL+R+ GLM EAGY P TGSVFHDVE+DEK NMVCSHSERL
Sbjct: 427  VHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERL 486

Query: 168  AIAFGLISTAPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKHG 1
            AIAFGLIST PGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFK G
Sbjct: 487  AIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDG 542



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
 Frame = -1

Query: 888 WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
           WN LI GY  +G  E A++ + +M   GL PDN TF  VL AC+    +  G ++ + +V
Sbjct: 144 WNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVV 203

Query: 708 TEFWIEPDVEHYACMVDLLGHCGKLDEAYDLIRHMSVMPDSGV--WGALLNSCKIHGN 541
              W E DV   A ++D+   CG +  A ++   + V     V  W A++    +HG+
Sbjct: 204 QTGW-EKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGH 260


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
            gi|449522468|ref|XP_004168248.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  405 bits (1041), Expect = e-111
 Identities = 200/296 (67%), Positives = 230/296 (77%)
 Frame = -1

Query: 888  WNSLIGGYGMHGLGENALRTFDEMIKAGLKPDNITFVAVLSACSHAGLVAAGHDLFDRMV 709
            WN++I GY MHG    AL  F EM K  + PD+ITFV VL+ACSH GL+  G   F  M+
Sbjct: 272  WNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMI 330

Query: 708  TEFWIEPDVEHYACMVDLLGHCGKLDEAYDLIRHMSVMPDSGVWGALLNSCKIHGNVXXX 529
            ++F I P V+HY CM+DLLGHCG+L+EAY LI  M V PD+GVWGALL+SCKIHGNV   
Sbjct: 331  SDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMG 390

Query: 528  XXXXXXXXXXEPDDSGNYVVLANMYAQSGNWEGVERLRQLMIDKGIKKNIACSWIEVKNK 349
                      EPDD GNYV+L+NMYAQ+G W+GV RLR LM++KG+KK+IACSWIEV NK
Sbjct: 391  ELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNK 450

Query: 348  VYAFLSGDVSHPDSGAIHAELKRLEGLMHEAGYVPDTGSVFHDVEEDEKTNMVCSHSERL 169
            V+AFLS D SHP S AI+AELKR   LM EAGY P  GSVFHDVE+DEK +MV  HSERL
Sbjct: 451  VHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERL 510

Query: 168  AIAFGLISTAPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKHG 1
            AIAFGLIST+ GT+LLI KNLRICEDCHVAIKFISKITEREIT+RDVNRYHHFK G
Sbjct: 511  AIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDG 566