BLASTX nr result

ID: Glycyrrhiza24_contig00022366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022366
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71259.1| hypothetical protein [Trifolium pratense]              71   8e-11
gb|ABE80133.2| Polynucleotidyl transferase, Ribonuclease H fold ...    62   5e-08
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    62   5e-08
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>dbj|BAE71259.1| hypothetical protein [Trifolium pratense]
          Length = 553

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = +2

Query: 11  GCGGILRDRDG*WIGGYARGLGCCSAFIAELWGVYEGLKLAHSMGLTLWRYNL 169
           GCGGI+R   G W+GG+ARGLG CSA IAELWGV EGL  A  +G T    N+
Sbjct: 409 GCGGIIRGSQGEWLGGFARGLGNCSAIIAELWGVAEGLSYARRLGFTAVELNV 461


>gb|ABE80133.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 282

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = +2

Query: 8   SGCGGILRDRDG*WIGGYARGLGCCSAFIAELWGVYEGLKLAHSMGLTLWRYN 166
           +GCGG+LRD DG WI GY + +G C AF AE+WG+Y GL +A       WR N
Sbjct: 204 AGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGLDMA-------WREN 249


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = +2

Query: 8   SGCGGILRDRDG*WIGGYARGLGCCSAFIAELWGVYEGLKLAHSMGLTLWRYN 166
           +GCGG+LRD DG WI GY + +G C AF AE+WG+Y GL +A       WR N
Sbjct: 651 AGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGLDMA-------WREN 696


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +2

Query: 2   GPSGCGGILRDRDG*WIGGYARGLGCCSAFIAELWGVYEGLKLAHSMG 145
           G +G GG++RD  G WIGG+AR +G CS+  AELW VY GL+LA   G
Sbjct: 97  GVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +2

Query: 2   GPSGCGGILRDRDG*WIGGYARGLGCCSAFIAELWGVYEGLKLAHSMG 145
           G +G GG++RD  G WIGG+AR +G CS+  AELW VY GL+LA   G
Sbjct: 97  GVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144


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