BLASTX nr result

ID: Glycyrrhiza24_contig00022356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022356
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599987.1| DNA polymerase [Medicago truncatula] gi|3554...   227   2e-57
ref|XP_003599989.1| DNA polymerase [Medicago truncatula] gi|3554...   222   5e-56
ref|XP_003518521.1| PREDICTED: uncharacterized protein LOC100797...   136   5e-30
ref|XP_003617486.1| DNA polymerase [Medicago truncatula] gi|3555...   124   2e-26

>ref|XP_003599987.1| DNA polymerase [Medicago truncatula] gi|355489035|gb|AES70238.1|
           DNA polymerase [Medicago truncatula]
          Length = 1112

 Score =  227 bits (579), Expect = 2e-57
 Identities = 134/219 (61%), Positives = 160/219 (73%), Gaps = 4/219 (1%)
 Frame = -1

Query: 673 KIQSIQIANNVLQQHRTLSSNFLHFREGSYCLKRISFGLNKRNGMECNNNSPVHISVMKF 494
           K +SIQIA+N L+ HR LS + L FREGSYC KRISFGL K N ME + NSPVHISVMKF
Sbjct: 52  KSKSIQIASNFLR-HRNLSGSSLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHISVMKF 110

Query: 493 STASCSMLEVRNQXXXXXXXXXLCSYDKQVRMMS-LGPRNCRLSRTPSIGKLYGGDGIGW 317
           STAS S L+V NQ         L SYD+QVRMM+  G  + RLS+TP   +   GD  GW
Sbjct: 111 STASFSTLKVTNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTPR--RKLSGDRTGW 168

Query: 316 AEASYKLSERKKEMHDLNKCSSYPS--NTIASN-SQKQAISKSGRHNPMLHDLREPASSP 146
           AEA +KL++ K EMHDL+K S YPS  NTIAS+ +QK AI+++  HN MLHDL EPASS 
Sbjct: 169 AEAGHKLTQIKMEMHDLDKRSLYPSNTNTIASSIAQKPAITQNEGHNLMLHDLCEPASSS 228

Query: 145 VEHSILNNSKVLIDTEKVGTQLNVPSLKINEEKIDRVNG 29
           V+HS+LNNS +LIDTE+VGT+ NV SLK  EEKID V+G
Sbjct: 229 VQHSMLNNSMLLIDTERVGTESNVSSLKTGEEKIDGVDG 267


>ref|XP_003599989.1| DNA polymerase [Medicago truncatula] gi|355489037|gb|AES70240.1|
           DNA polymerase [Medicago truncatula]
          Length = 1098

 Score =  222 bits (566), Expect = 5e-56
 Identities = 133/235 (56%), Positives = 158/235 (67%), Gaps = 24/235 (10%)
 Frame = -1

Query: 634 QHRTLSSNFLHFREGSYCLKRISFGLNKRNGMECNNNSPVHISVMKFSTASCSMLEVRNQ 455
           +HR LS +FL FREGSYC KRISFGL K N ME + NSPVHISVMKFSTAS S L+V NQ
Sbjct: 50  RHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHISVMKFSTASFSTLKVTNQ 109

Query: 454 XXXXXXXXXLCSYDKQVRMMS-LGPRNCRLSRTPSIGKLYGGDGIGWAEASYKLSERKKE 278
                    L SYD+QVRMM+  G  + RLS+TP   +   GD  GWAEA +KL++ K E
Sbjct: 110 TRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTPR--RKLSGDRTGWAEAGHKLTQIKME 167

Query: 277 MHDLNKCSSYPS--NTIASN-SQKQAISKSGRHNPMLHDLREPASSPVEHSILNNSKVLI 107
           MHDL+K S YPS  NTIAS+ +QK AI+++   N MLHDL EPASS V+HS+LNNS +LI
Sbjct: 168 MHDLDKRSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSMLLI 227

Query: 106 DTEKV--------------------GTQLNVPSLKINEEKIDRVNGNHGLDTTAK 2
           DTE+V                    GT+ NV SLK +EEKID V+GNH LD TAK
Sbjct: 228 DTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAK 282


>ref|XP_003518521.1| PREDICTED: uncharacterized protein LOC100797016 [Glycine max]
          Length = 1077

 Score =  136 bits (342), Expect = 5e-30
 Identities = 102/234 (43%), Positives = 126/234 (53%), Gaps = 10/234 (4%)
 Frame = -1

Query: 673 KIQSIQIANNVLQQHRTLSSNFLHFR-EGSYCLKRISFGLNKRNGMECNNN----SPVHI 509
           K+QS QI+ N L+ + T+  NF+  R + S CLK  S GLNK NG     N    SPV I
Sbjct: 36  KMQSFQISYNGLR-NSTVLRNFVQSRADFSCCLKGTSVGLNKYNGARYKRNFLCKSPVCI 94

Query: 508 SVMKFSTASCSMLEVRNQXXXXXXXXXLCSYDKQVRMMSLGPRNCRLSRTPSIGKLYGGD 329
           S MK S AS   LE   +             + QVR + +   N   S T    KL GGD
Sbjct: 95  SSMKISNASTGTLEEMTEEEELNSLRPC---EMQVRTVGMAACNNEFSTTTLGKKLSGGD 151

Query: 328 GIGWAEASYKLSERKKEMHDLNKC-----SSYPSNTIASNSQKQAISKSGRHNPMLHDLR 164
             GW  A  KL+E KKEM+  NK      S   SN IAS +Q QA+ ++G    +L D  
Sbjct: 152 YRGWTMAKDKLTENKKEMNGSNKFERENGSFSASNGIASIAQNQAVPRNGDSIIVLQDPG 211

Query: 163 EPASSPVEHSILNNSKVLIDTEKVGTQLNVPSLKINEEKIDRVNGNHGLDTTAK 2
             A S V +S+LNNSKVL D+EKV  Q N  SL I +EK+  VNG+HGLD TAK
Sbjct: 212 THAPSSVNYSVLNNSKVLTDSEKVIHQYNGSSLGIGKEKVIVVNGDHGLDETAK 265


>ref|XP_003617486.1| DNA polymerase [Medicago truncatula] gi|355518821|gb|AET00445.1|
           DNA polymerase [Medicago truncatula]
          Length = 1084

 Score =  124 bits (312), Expect = 2e-26
 Identities = 90/232 (38%), Positives = 127/232 (54%), Gaps = 9/232 (3%)
 Frame = -1

Query: 673 KIQSIQIANNVLQQHRTLSSNFLHFREGSYCLKRISFGLNKRNGMECNNN----SPVHIS 506
           KI++IQIA+N L+ + T+ SN +  R    C K  S GLN+ +     +N    +PV ++
Sbjct: 43  KIKAIQIASNGLR-NSTMHSNCV--RADLLCTKLTSLGLNEHSNTGYKHNFPYKNPVRVT 99

Query: 505 VMKFSTASCSMLEVRNQXXXXXXXXXLCSYDKQVRMMSLGPRNCRLSRTPSIGKLYGGDG 326
           +MKFS AS SMLE   +           S + QVR + + P N  LS T +  KL GGD 
Sbjct: 100 LMKFSNASASMLE---EMMVEEEVNSSHSSEMQVRKVDVAPCNPELSTTATERKLAGGDN 156

Query: 325 IGWAEASYKLSERKKEMHDLNKCS-----SYPSNTIASNSQKQAISKSGRHNPMLHDLRE 161
            GW  A  KL+E KKEM+  N+       S+ SN  AS  ++Q  S     N +     E
Sbjct: 157 RGWTLAKNKLAEGKKEMNGTNRYERKSNGSHVSNRFASIGRRQGSSTDVVSNLVRQGHGE 216

Query: 160 PASSPVEHSILNNSKVLIDTEKVGTQLNVPSLKINEEKIDRVNGNHGLDTTA 5
             SS V++S+LNNSK+  D+E V  Q N  +L+I+EEKI +VNG+   + TA
Sbjct: 217 HVSSSVQYSVLNNSKMFTDSETVVHQFNESALEISEEKITKVNGDDVSEETA 268


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