BLASTX nr result

ID: Glycyrrhiza24_contig00022353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022353
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549468.1| PREDICTED: ABC transporter B family member 1...   225   3e-57
ref|XP_003544389.1| PREDICTED: ABC transporter B family member 1...   221   6e-56
ref|XP_003589516.1| ABC transporter B family member [Medicago tr...   199   2e-49
ref|XP_002301961.1| multidrug/pheromone exporter, MDR family, AB...   188   3e-46
ref|XP_004164800.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   178   4e-43

>ref|XP_003549468.1| PREDICTED: ABC transporter B family member 13-like [Glycine max]
          Length = 1250

 Score =  225 bits (573), Expect = 3e-57
 Identities = 115/140 (82%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
 Frame = +2

Query: 2    RNSSFREPSDNLNHEEELN---TRELQSSDRGLPSNTASIPSILDLLKLNAPEWPYAVLG 172
            RNSSFREPSDNL  EE+L      ELQS D+ LPS T S PSILDLLKLNAPEWPYA+LG
Sbjct: 624  RNSSFREPSDNLTLEEQLKLDAAAELQSRDQHLPSKTTSTPSILDLLKLNAPEWPYAILG 683

Query: 173  SVGAVMAGMEAPLFALGITHILTAFYSPHGSQIKQEVDRVALIFVGVAVVTIPIYLLQHY 352
            SVGA++AGMEAPLFALGITHILTAFYSP GS+IKQEVDRVA IF+GVAV+TIPIYLL HY
Sbjct: 684  SVGAILAGMEAPLFALGITHILTAFYSPQGSKIKQEVDRVAFIFLGVAVITIPIYLLLHY 743

Query: 353  FYSLMGERLTARVRLLMFSA 412
            FY+LMGERLTARVRLLMFSA
Sbjct: 744  FYTLMGERLTARVRLLMFSA 763


>ref|XP_003544389.1| PREDICTED: ABC transporter B family member 13-like [Glycine max]
          Length = 1250

 Score =  221 bits (562), Expect = 6e-56
 Identities = 114/140 (81%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
 Frame = +2

Query: 2    RNSSFREPSDNLNHEEELN---TRELQSSDRGLPSNTASIPSILDLLKLNAPEWPYAVLG 172
            RNSSFREPSDNL  EE L      ELQS D+ LPS T S PSILDLLKLNAPEWPYA+LG
Sbjct: 624  RNSSFREPSDNLTLEEPLKLDTAAELQSRDQHLPSKTTSTPSILDLLKLNAPEWPYAILG 683

Query: 173  SVGAVMAGMEAPLFALGITHILTAFYSPHGSQIKQEVDRVALIFVGVAVVTIPIYLLQHY 352
            SVGA++AGMEAPLFALGITHILTAFYSP GS+IKQEVD VA IF+GVAV+TIPIYLL HY
Sbjct: 684  SVGAILAGMEAPLFALGITHILTAFYSPQGSKIKQEVDWVAFIFLGVAVITIPIYLLLHY 743

Query: 353  FYSLMGERLTARVRLLMFSA 412
            FY+LMGERLTARVRLLMFSA
Sbjct: 744  FYTLMGERLTARVRLLMFSA 763


>ref|XP_003589516.1| ABC transporter B family member [Medicago truncatula]
            gi|355478564|gb|AES59767.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 1286

 Score =  199 bits (506), Expect = 2e-49
 Identities = 103/136 (75%), Positives = 116/136 (85%)
 Frame = +2

Query: 2    RNSSFREPSDNLNHEEELNTRELQSSDRGLPSNTASIPSILDLLKLNAPEWPYAVLGSVG 181
            RN SFRE  +NLN+EE      +QSSD+GL SNTAS+PSIL LLKLNAPEWPYA+LGSVG
Sbjct: 624  RNYSFREIPNNLNNEE------VQSSDQGLTSNTASVPSILGLLKLNAPEWPYAILGSVG 677

Query: 182  AVMAGMEAPLFALGITHILTAFYSPHGSQIKQEVDRVALIFVGVAVVTIPIYLLQHYFYS 361
            AV+AGMEAPLFA+GITHIL  FYS    +IK EVD VA+IFV +AVVTIPIYLL+HYFYS
Sbjct: 678  AVLAGMEAPLFAIGITHILATFYSAQSPKIKHEVDHVAVIFVVLAVVTIPIYLLKHYFYS 737

Query: 362  LMGERLTARVRLLMFS 409
            LMG+RLTARVRLLMFS
Sbjct: 738  LMGDRLTARVRLLMFS 753


>ref|XP_002301961.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222843687|gb|EEE81234.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1219

 Score =  188 bits (478), Expect = 3e-46
 Identities = 98/136 (72%), Positives = 115/136 (84%), Gaps = 1/136 (0%)
 Frame = +2

Query: 8    SSFREPSDNLNHEEELNTRELQSSDRGL-PSNTASIPSILDLLKLNAPEWPYAVLGSVGA 184
            SSFRE + + N  +E+ TREL+S+D  L P+N +  PSI +L+KLNAPEWPYAVLGSVGA
Sbjct: 609  SSFRELTSSQN--QEVTTRELKSNDENLSPANFSPTPSIWELVKLNAPEWPYAVLGSVGA 666

Query: 185  VMAGMEAPLFALGITHILTAFYSPHGSQIKQEVDRVALIFVGVAVVTIPIYLLQHYFYSL 364
            +MAGMEAPLFALGITH+LTAFYSP  SQ+K+EV  VALIFVG AVVT+PIY+LQHYFY+L
Sbjct: 667  MMAGMEAPLFALGITHMLTAFYSPDNSQMKKEVHLVALIFVGAAVVTVPIYILQHYFYTL 726

Query: 365  MGERLTARVRLLMFSA 412
            MGERL  RVRL MFSA
Sbjct: 727  MGERLITRVRLSMFSA 742


>ref|XP_004164800.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
            13-like [Cucumis sativus]
          Length = 1248

 Score =  178 bits (452), Expect = 4e-43
 Identities = 90/140 (64%), Positives = 113/140 (80%), Gaps = 3/140 (2%)
 Frame = +2

Query: 2    RNSSFREPSDNLNH---EEELNTRELQSSDRGLPSNTASIPSILDLLKLNAPEWPYAVLG 172
            R+SSF+E   + N     +     +LQS+++ L +   S PSI +LLKLNA EWPYA+LG
Sbjct: 622  RHSSFQEAFSSHNSILDSKSFRETKLQSANKDLKTLNYSPPSIWELLKLNAREWPYAILG 681

Query: 173  SVGAVMAGMEAPLFALGITHILTAFYSPHGSQIKQEVDRVALIFVGVAVVTIPIYLLQHY 352
            S+GA++AG++APLFALGITH+L+AFYSPH SQIK+EV  VA +FVGVA+ TIPIYLLQHY
Sbjct: 682  SIGAILAGIQAPLFALGITHVLSAFYSPHHSQIKEEVHHVAFMFVGVAIFTIPIYLLQHY 741

Query: 353  FYSLMGERLTARVRLLMFSA 412
            FY+LMGERLTARVRLL+FSA
Sbjct: 742  FYTLMGERLTARVRLLLFSA 761


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