BLASTX nr result

ID: Glycyrrhiza24_contig00022340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022340
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like ...   130   8e-29
ref|XP_003615341.1| LG27/30-like gene [Medicago truncatula] gi|3...   123   1e-26
ref|XP_002301114.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002527357.1| lyase, putative [Ricinus communis] gi|223533...   108   4e-22
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   107   1e-21

>ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 651

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/74 (82%), Positives = 68/74 (91%)
 Frame = -1

Query: 222 MCSQAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRGYWDVV 43
           M SQAVQL ++D+ VVMDNGILQVY+SNPGGFVT IQYNGI NLLE L+E++NRGYWDVV
Sbjct: 1   MASQAVQLRVEDSQVVMDNGILQVYLSNPGGFVTGIQYNGIDNLLETLNEKDNRGYWDVV 60

Query: 42  WSEAGSTGTTGTFE 1
           WSEAGSTGTTGTFE
Sbjct: 61  WSEAGSTGTTGTFE 74


>ref|XP_003615341.1| LG27/30-like gene [Medicago truncatula] gi|355516676|gb|AES98299.1|
           LG27/30-like gene [Medicago truncatula]
          Length = 661

 Score =  123 bits (309), Expect = 1e-26
 Identities = 63/91 (69%), Positives = 68/91 (74%), Gaps = 17/91 (18%)
 Frame = -1

Query: 222 MCSQAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRG----- 58
           M SQAVQL IK N+VVMDNGI+QVY+SNPGGFVTRIQYNGI NLLE L+E+NNRG     
Sbjct: 1   MSSQAVQLRIKSNHVVMDNGIVQVYLSNPGGFVTRIQYNGIDNLLEALNEKNNRGYITTN 60

Query: 57  ------------YWDVVWSEAGSTGTTGTFE 1
                       YWDVVWSE GSTGTTGTFE
Sbjct: 61  KLRLISLFPLIMYWDVVWSEYGSTGTTGTFE 91


>ref|XP_002301114.1| predicted protein [Populus trichocarpa] gi|222842840|gb|EEE80387.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/74 (71%), Positives = 60/74 (81%)
 Frame = -1

Query: 222 MCSQAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRGYWDVV 43
           M +  VQL I+D +VVMDNGILQV +SNPGG VT IQYNGI NLLE L    NRGYWD+V
Sbjct: 1   MSTPRVQLLIEDQHVVMDNGILQVTLSNPGGIVTGIQYNGIDNLLEALDLETNRGYWDLV 60

Query: 42  WSEAGSTGTTGTFE 1
           WS+AGSTGTTGTF+
Sbjct: 61  WSQAGSTGTTGTFD 74


>ref|XP_002527357.1| lyase, putative [Ricinus communis] gi|223533276|gb|EEF35029.1|
           lyase, putative [Ricinus communis]
          Length = 639

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/74 (64%), Positives = 60/74 (81%)
 Frame = -1

Query: 222 MCSQAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRGYWDVV 43
           M +  V LHI+D++VV+DNGILQV +SNPGG VT ++YN + NLLE L +  NRGYWD+V
Sbjct: 1   MSTPGVHLHIEDHHVVLDNGILQVTLSNPGGIVTGVRYNNVDNLLEVLDDEVNRGYWDLV 60

Query: 42  WSEAGSTGTTGTFE 1
           WS AGSTGTTGTF+
Sbjct: 61  WSAAGSTGTTGTFD 74


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/71 (69%), Positives = 60/71 (84%)
 Frame = -1

Query: 213 QAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRGYWDVVWSE 34
           Q VQL+I+DN+V++DNGILQV +SNP G VT IQYNGI NLLE L++ +NRGYWD+VWS 
Sbjct: 4   QGVQLNIQDNHVMLDNGILQVTLSNPEGIVTGIQYNGIGNLLEVLNDESNRGYWDLVWST 63

Query: 33  AGSTGTTGTFE 1
            GSTGTTG F+
Sbjct: 64  PGSTGTTGIFD 74


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