BLASTX nr result

ID: Glycyrrhiza24_contig00022294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022294
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptas...   183   1e-44
gb|ABE79576.2| RNA-directed DNA polymerase (Reverse transcriptas...   181   6e-44
gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptas...   177   8e-43
ref|XP_003548655.1| PREDICTED: uncharacterized protein LOC100792...   175   3e-42
ref|XP_003537341.1| PREDICTED: uncharacterized protein LOC100813...   169   2e-40

>gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 469

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/138 (63%), Positives = 110/138 (79%)
 Frame = -2

Query: 420 KILSKLLACRLQKVMQFIISDQQSAFIKGRQIMDGVLIANELVDEARKLKKKCVMFKVDF 241
           KIL+K+LA RL  V+  +I + QSAFIKGRQI+D +L+ANE+VDEARK KK  ++FKVDF
Sbjct: 3   KILTKILANRLCMVIGSVIFETQSAFIKGRQILDDILVANEVVDEARKCKKGLILFKVDF 62

Query: 240 AKAYDSISWGFLEFALIKMGFSPVWRKWMMECVSTATISILVNGSPTDEFGLGRGLRQGD 61
            KAY+SI W +L+  ++KMGF  +WRKW+ EC+ TAT S+LVNGSP DEF L RGLRQGD
Sbjct: 63  EKAYNSIDWSYLDDVMLKMGFPTLWRKWIKECIGTATTSVLVNGSPIDEFSLRRGLRQGD 122

Query: 60  PLSPFLFIIVAEGLSVMM 7
            LSPFLF++ AEG  V+M
Sbjct: 123 RLSPFLFLLAAEGFHVLM 140


>gb|ABE79576.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 556

 Score =  181 bits (459), Expect = 6e-44
 Identities = 82/139 (58%), Positives = 114/139 (82%)
 Frame = -2

Query: 420 KILSKLLACRLQKVMQFIISDQQSAFIKGRQIMDGVLIANELVDEARKLKKKCVMFKVDF 241
           K+L+K+LA RL+ V++ +ISD QSAF+KG+QI+DG+LIANE+VDEAR++ K+ +MFKVDF
Sbjct: 134 KVLAKVLANRLRGVLESVISDSQSAFVKGQQILDGILIANEVVDEARRMNKELLMFKVDF 193

Query: 240 AKAYDSISWGFLEFALIKMGFSPVWRKWMMECVSTATISILVNGSPTDEFGLGRGLRQGD 61
            KAYDS+   +L+  +  M F  +W+KW+ ECV TAT S+LVNG PTDEF + RGLRQGD
Sbjct: 194 QKAYDSVDLNYLDSVMRNMNFPTLWQKWIHECVGTATASVLVNGCPTDEFTVERGLRQGD 253

Query: 60  PLSPFLFIIVAEGLSVMMS 4
           PLSPFLF++ A+G +++M+
Sbjct: 254 PLSPFLFLLAAKGFNILMN 272


>gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 320

 Score =  177 bits (449), Expect = 8e-43
 Identities = 83/138 (60%), Positives = 111/138 (80%)
 Frame = -2

Query: 420 KILSKLLACRLQKVMQFIISDQQSAFIKGRQIMDGVLIANELVDEARKLKKKCVMFKVDF 241
           KIL+K+L+ RL+ V+  +ISD QSAF++ RQI+DG+L+AN +VDEA K +K  ++FKVDF
Sbjct: 48  KILAKVLSNRLRLVIGSVISDSQSAFVRDRQILDGILVANGIVDEACKCRKDLMLFKVDF 107

Query: 240 AKAYDSISWGFLEFALIKMGFSPVWRKWMMECVSTATISILVNGSPTDEFGLGRGLRQGD 61
            KAY+S+ WG+L+    +MGF  +WRKW+ ECV T T S+LVNG+PT EF L RGLRQGD
Sbjct: 108 EKAYESVDWGYLDAITGRMGFPTLWRKWIKECVCTTTTSMLVNGNPTLEFPLERGLRQGD 167

Query: 60  PLSPFLFIIVAEGLSVMM 7
           PLSPFLF++ AEGL++MM
Sbjct: 168 PLSPFLFLLAAEGLNIMM 185


>ref|XP_003548655.1| PREDICTED: uncharacterized protein LOC100792785 [Glycine max]
          Length = 685

 Score =  175 bits (444), Expect = 3e-42
 Identities = 86/140 (61%), Positives = 109/140 (77%)
 Frame = -2

Query: 420 KILSKLLACRLQKVMQFIISDQQSAFIKGRQIMDGVLIANELVDEARKLKKKCVMFKVDF 241
           K+++KLLA RL+ V+  II ++QSAFIK R I+ GVLI NE+V+EA K KK  ++FKVDF
Sbjct: 220 KVIAKLLANRLRSVISGIIDERQSAFIKDRHILHGVLILNEVVEEALKRKKPVMVFKVDF 279

Query: 240 AKAYDSISWGFLEFALIKMGFSPVWRKWMMECVSTATISILVNGSPTDEFGLGRGLRQGD 61
            KAYDS+SW FL++ LI++GF P WRKW+  C+ +ATISILVNGSPT E    RGLRQGD
Sbjct: 280 KKAYDSVSWSFLDYMLIRLGFYPKWRKWIAACLQSATISILVNGSPTKELAPTRGLRQGD 339

Query: 60  PLSPFLFIIVAEGLSVMMSQ 1
           PL+P LF IV EGL+ MM +
Sbjct: 340 PLAPLLFNIVGEGLTGMMRE 359


>ref|XP_003537341.1| PREDICTED: uncharacterized protein LOC100813042 [Glycine max]
          Length = 645

 Score =  169 bits (429), Expect = 2e-40
 Identities = 80/138 (57%), Positives = 106/138 (76%)
 Frame = -2

Query: 420 KILSKLLACRLQKVMQFIISDQQSAFIKGRQIMDGVLIANELVDEARKLKKKCVMFKVDF 241
           KI++K+LA RL  V+  +I ++Q+ F+KGR I+ GVLIANE + EA+   K C++FKVDF
Sbjct: 250 KIVAKVLAKRLALVLPHLIDERQTTFMKGRHILHGVLIANEAIAEAKSKNKLCMVFKVDF 309

Query: 240 AKAYDSISWGFLEFALIKMGFSPVWRKWMMECVSTATISILVNGSPTDEFGLGRGLRQGD 61
            K YDS+SWGFL++ L++MGF   W KW+  C+STATISIL+NGSP+ EF   RGLRQGD
Sbjct: 310 GKVYDSVSWGFLDYMLMRMGFCERWLKWINGCLSTATISILINGSPSKEFAPKRGLRQGD 369

Query: 60  PLSPFLFIIVAEGLSVMM 7
           PL+P LF IV EGL+ +M
Sbjct: 370 PLAPLLFNIVVEGLTALM 387


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