BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022292
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623067.1| Pentatricopeptide repeat-containing protein ...   478   e-133
ref|XP_003613759.1| Pentatricopeptide repeat-containing protein ...   437   e-120
ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-115
ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   386   e-105

>ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498082|gb|AES79285.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  478 bits (1230), Expect = e-133
 Identities = 230/275 (83%), Positives = 255/275 (92%), Gaps = 1/275 (0%)
 Frame = +1

Query: 4    PDVTTYTILVDGFCRQGRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVNL 183
            PDVT+YT+LVDGFCR G+LVDAI+VMD ME+NGVEPNEVTYGVMI+AYCK KKSGEAVNL
Sbjct: 259  PDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNL 318

Query: 184  LEDMLGKGCLPGSALCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVV-STLIHWLC 360
            +EDM+ K  + GS LCCKV+DLLCEEGNVE+ACE+WRMVSR+NCG + AVV STLIHWLC
Sbjct: 319  IEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLC 378

Query: 361  KKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 540
            KKGKVLEAR+VFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKG+APNAFT
Sbjct: 379  KKGKVLEARNVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFT 438

Query: 541  YNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQEINKVVALA 720
            YNMLIKGFCKVGNAKEGIR++EEMLE  CLPNKSTY++LIDG+LL GGMKQEINKVV+LA
Sbjct: 439  YNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQEINKVVSLA 498

Query: 721  MSNGVDGDLWNLFVKPVVGNVDCSAAELDRILIEN 825
            MS GVD DLWN+FVKPVVGN +   AELDRIL+EN
Sbjct: 499  MSTGVDADLWNIFVKPVVGNDNGGEAELDRILLEN 533



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 1/231 (0%)
 Frame = +1

Query: 4   PDVTTYTILVDGFCRQGRLVDAIKVMDDMEEN-GVEPNEVTYGVMIEAYCKAKKSGEAVN 180
           P V +   L++   +  R   A  V  +  E   V PN V+  ++++A CK  +   AV 
Sbjct: 153 PSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVK 212

Query: 181 LLEDMLGKGCLPGSALCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVVSTLIHWLC 360
           +L++M G G +P       V+      G+++ A +V+R V  R   PD            
Sbjct: 213 VLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPD------------ 260

Query: 361 KKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 540
                                 + +Y  L+ G C  G+L +A R+ D M + G+ PN  T
Sbjct: 261 ----------------------VTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVT 298

Query: 541 YNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQ 693
           Y ++I+ +CK   + E + ++E+M+ K  +        ++D L   G +++
Sbjct: 299 YGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEK 349



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 36/101 (35%), Positives = 58/101 (57%)
 Frame = +1

Query: 1   VPDVTTYTILVDGFCRQGRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVN 180
           V  + TY  L+ G C  G L +A ++ DDM E GV PN  TY ++I+ +CK   + E + 
Sbjct: 398 VASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIR 457

Query: 181 LLEDMLGKGCLPGSALCCKVIDLLCEEGNVERACEVWRMVS 303
           +LE+ML   CLP  +    +ID +   G +++  E+ ++VS
Sbjct: 458 VLEEMLENRCLPNKSTYTILIDGILLLGGMKQ--EINKVVS 496



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/161 (26%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
 Frame = +1

Query: 262 GNVERACEVWRMVSRRNCGPDSAVVSTLIHWLCKKGKVLEARSVFDEFGKGS--VASLLT 435
           G   RA + +  +      P    ++ L++ L +  +   A  VF   G+    + ++++
Sbjct: 134 GKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVS 193

Query: 436 YNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEGIRIMEEML 615
            N L+  LC+G E+  A ++ D+M   GL PN  +Y  ++ GF   G+    +++  E+L
Sbjct: 194 CNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVL 253

Query: 616 EKGCLPNKSTYSVLIDGLLLSGGMKQEINKVVALAMSNGVD 738
           ++G  P+ ++Y+VL+DG    G +   I +V+ +   NGV+
Sbjct: 254 DRGWSPDVTSYTVLVDGFCRLGKLVDAI-RVMDIMEDNGVE 293


>ref|XP_003613759.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515094|gb|AES96717.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 733

 Score =  437 bits (1124), Expect = e-120
 Identities = 215/275 (78%), Positives = 240/275 (87%), Gaps = 1/275 (0%)
 Frame = +1

Query: 4   PDVTTYTILVDGFCRQGRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVNL 183
           PDVT+YT+LVDGFCR G+LVDAI+VMD MEENGVEPNE              KSGEAVNL
Sbjct: 137 PDVTSYTVLVDGFCRLGKLVDAIRVMDVMEENGVEPNE--------------KSGEAVNL 182

Query: 184 LEDMLGKGCLPGSALCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVV-STLIHWLC 360
           +EDM+ K  + GS LCCKV+D+LCEEGNVE+ACEVWRMVSR+NCG + AVV STL HWLC
Sbjct: 183 IEDMIAKDLVVGSELCCKVVDVLCEEGNVEKACEVWRMVSRKNCGLNGAVVVSTLTHWLC 242

Query: 361 KKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 540
           KKGKVLEAR++FDEFGKG VASLLTYNTLIAGLCEGG+LCEAARLWD+MVEKG+APNAFT
Sbjct: 243 KKGKVLEARNMFDEFGKGLVASLLTYNTLIAGLCEGGKLCEAARLWDEMVEKGVAPNAFT 302

Query: 541 YNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQEINKVVALA 720
           YNMLIKGFCKV NAKEGIR++EEMLE  C PNKSTY++LIDG+LLSGGMKQEINKVV+LA
Sbjct: 303 YNMLIKGFCKVRNAKEGIRVLEEMLENRCFPNKSTYTILIDGILLSGGMKQEINKVVSLA 362

Query: 721 MSNGVDGDLWNLFVKPVVGNVDCSAAELDRILIEN 825
           MS GVD DLWN+FVKPVVGN D  AAELDRIL+EN
Sbjct: 363 MSTGVDADLWNIFVKPVVGNDDGGAAELDRILLEN 397



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 34/101 (33%), Positives = 59/101 (58%)
 Frame = +1

Query: 1   VPDVTTYTILVDGFCRQGRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVN 180
           V  + TY  L+ G C  G+L +A ++ D+M E GV PN  TY ++I+ +CK + + E + 
Sbjct: 262 VASLLTYNTLIAGLCEGGKLCEAARLWDEMVEKGVAPNAFTYNMLIKGFCKVRNAKEGIR 321

Query: 181 LLEDMLGKGCLPGSALCCKVIDLLCEEGNVERACEVWRMVS 303
           +LE+ML   C P  +    +ID +   G +++  E+ ++VS
Sbjct: 322 VLEEMLENRCFPNKSTYTILIDGILLSGGMKQ--EINKVVS 360



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 33/102 (32%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
 Frame = +1

Query: 343 LIHWLCKKGKVLEARSVFDEF-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKG 519
           L+  LCK  +V  A  V DE  G G V ++++Y T++ G    G++  A +++ +++++G
Sbjct: 75  LLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRG 134

Query: 520 LAPNAFTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKST 645
            +P+  +Y +L+ GFC++G   + IR+M+ M E G  PN+ +
Sbjct: 135 WSPDVTSYTVLVDGFCRLGKLVDAIRVMDVMEENGVEPNEKS 176



 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 32/100 (32%), Positives = 58/100 (58%)
 Frame = +1

Query: 439 NTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEGIRIMEEMLE 618
           N L+  LC+G E+  A ++ D+M   GL PN  +Y  ++ GF   G+    +++  E+L+
Sbjct: 73  NILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLD 132

Query: 619 KGCLPNKSTYSVLIDGLLLSGGMKQEINKVVALAMSNGVD 738
           +G  P+ ++Y+VL+DG    G +   I +V+ +   NGV+
Sbjct: 133 RGWSPDVTSYTVLVDGFCRLGKLVDAI-RVMDVMEENGVE 171


>ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Glycine max]
          Length = 529

 Score =  419 bits (1078), Expect = e-115
 Identities = 197/277 (71%), Positives = 239/277 (86%)
 Frame = +1

Query: 1    VPDVTTYTILVDGFCRQGRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVN 180
            +PDVT+YT+L+ GFCR G+LVDAI++MD MEEN V+P+EVTYGVMIEAYCK +K GEAVN
Sbjct: 253  MPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVN 312

Query: 181  LLEDMLGKGCLPGSALCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVVSTLIHWLC 360
            LLEDM+ KG +P S LCCKV+DLLCEEG+VERACEVWR V R+      AVVST++HWLC
Sbjct: 313  LLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVHWLC 372

Query: 361  KKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 540
            K+GKV+EAR V DE  KG VASL+TYNTLIAG+CE G+LCEA RLWD+MVEKG  PNAFT
Sbjct: 373  KEGKVVEARGVLDELEKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFT 432

Query: 541  YNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQEINKVVALA 720
            YN+L+KGFCKVG+ KE IR++EEM+E GCLPNKST+S+L+DG+ LSGG K+EI+KVV LA
Sbjct: 433  YNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSGGKKEEIDKVVLLA 492

Query: 721  MSNGVDGDLWNLFVKPVVGNVDCSAAELDRILIENAV 831
            M+ GVDG+ W+LF+K VVGN+D +A+ELDRIL ENAV
Sbjct: 493  MTTGVDGEWWDLFLKLVVGNLDGNASELDRILTENAV 529



 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 57/232 (24%), Positives = 110/232 (47%), Gaps = 2/232 (0%)
 Frame = +1

Query: 4   PDVTTYTILVDGFCRQGRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVNL 183
           P     T L+  +   G+ + A+++    +  GV     +   ++ A  + K+   A ++
Sbjct: 117 PPEPPLTTLIRAYGLAGKPLSALRIFLKFQPLGVR----SLNALLNALVQNKRHRLAHSV 172

Query: 184 LEDMLGKGCLPGSALCCKVI-DLLCEEGNVERACEVWRMVSRRNCGPDSAVVSTLIHWLC 360
            +    K  L  + + C ++   LC+   V+ A  V   +S     P+    ST++    
Sbjct: 173 FKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFV 232

Query: 361 KKGKVLEARSVFDEF-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAF 537
            KG +  A  VF E   KG +  + +Y  L++G C  G+L +A R+ D M E  + P+  
Sbjct: 233 FKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEV 292

Query: 538 TYNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQ 693
           TY ++I+ +CK     E + ++E+M+EKG +P+      ++D L   G +++
Sbjct: 293 TYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVER 344



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 30/94 (31%), Positives = 56/94 (59%)
 Frame = +1

Query: 418 VASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEGIR 597
           V ++++ N L+  LC+  E+  A R+ D+M   GL PN  +Y+ ++ GF   G+ +  +R
Sbjct: 183 VPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMR 242

Query: 598 IMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQEI 699
           +  E+L+KG +P+ ++Y+VL+ G    G +   I
Sbjct: 243 VFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAI 276


>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial [Vitis vinifera]
            gi|296089757|emb|CBI39576.3| unnamed protein product
            [Vitis vinifera]
          Length = 586

 Score =  394 bits (1013), Expect = e-107
 Identities = 185/279 (66%), Positives = 233/279 (83%), Gaps = 3/279 (1%)
 Frame = +1

Query: 1    VPDVTTYTILVDGFCRQGRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVN 180
            VPD TTYTIL+DG+C++GR +DA+KVMD+MEEN VEPN+VTYGV+IEAYCK KKSGE +N
Sbjct: 308  VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367

Query: 181  LLEDMLGKGCLPGSALCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVVSTLIHWLC 360
            LL+DML K  +P SALCC+VID+LCEEG VE ACE+W+ + ++NC PD+A+ STLIHWLC
Sbjct: 368  LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427

Query: 361  KKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 540
            K+GKV EAR +FDEF KGS+ S LTYN LIAG+CEGGEL EAARLWD+MVEKG  PNAFT
Sbjct: 428  KEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487

Query: 541  YNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQEINKVVALA 720
            YNMLIKGFCKVGNA+EGIR+MEEML+ GCLPNK+TY++L++G L   G++ E+  V+++A
Sbjct: 488  YNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEG-LYELGLEGEVTNVLSMA 546

Query: 721  MS-NGVDGDLWNLFVKPVV--GNVDCSAAELDRILIENA 828
             S  GVD + W +F+   V  GN+D   A++DRIL+E+A
Sbjct: 547  SSRGGVDAECWGVFLAKFVNGGNIDVEGAKIDRILVESA 585



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 55/213 (25%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
 Frame = +1

Query: 52  GRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVNLLEDMLGK--GCLPGSA 225
           GR   AI+    +   G++P+  ++  ++    + K+  + V+L+     K  G +P   
Sbjct: 184 GRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVF 242

Query: 226 LCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVVSTLIHWLCKKGKVLEARSVFDEF 405
            C  ++  LC++ +++ A  V   +      P+    +T++     KG ++ AR VF E 
Sbjct: 243 TCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEI 302

Query: 406 -GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNA 582
             +G V    TY  L+ G C+ G   +A ++ D+M E  + PN  TY ++I+ +CK   +
Sbjct: 303 LDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKS 362

Query: 583 KEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSG 681
            E + ++++MLEK  +P+ +    +ID L   G
Sbjct: 363 GEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEG 395



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 4/222 (1%)
 Frame = +1

Query: 28  LVDGFCRQGRLVDAIKVMDDMEE--NGVEPNEVTYGVMIEAYCKAKKSGEAVNLLEDMLG 201
           +V    RQ  L  A+++ D   +       N  TY  MIE   KA+       L+  +  
Sbjct: 104 VVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHK 163

Query: 202 KGCLPGSALCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVVSTLIHWLCKKGKVLE 381
                G  L   VI      G  + A   +  +      P     +TL++ L +  +   
Sbjct: 164 SQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDL 223

Query: 382 ARSVFDEFGK--GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLI 555
              +F    K  G V ++ T N L+  LC+  ++  A R+ ++M   G  PN  TY  ++
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTIL 283

Query: 556 KGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSG 681
            G+   G+     R+  E+L++G +P+ +TY++L+DG    G
Sbjct: 284 GGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKG 325



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +1

Query: 412 GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEK-GLAPNAFTYNMLIKGFCKVGNAKE 588
           G   S+ ++NTL+  L +         ++ +  +K G+ PN FT N+L+K  CK  +   
Sbjct: 200 GLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDA 259

Query: 589 GIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGM 687
            IR++EEM   G +PN  TY+ ++ G +  G M
Sbjct: 260 AIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDM 292


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  386 bits (992), Expect = e-105
 Identities = 183/277 (66%), Positives = 227/277 (81%), Gaps = 1/277 (0%)
 Frame = +1

Query: 1    VPDVTTYTILVDGFCRQGRLVDAIKVMDDMEENGVEPNEVTYGVMIEAYCKAKKSGEAVN 180
            +PD TTYTIL++G+C QGRL DAIK+MDDM ENGVEPNEVTYGVM+EAYCK KK+GEA N
Sbjct: 268  LPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARN 327

Query: 181  LLEDMLGKGCLPGSALCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVVSTLIHWLC 360
            LL+DML +  +P SALCCKVID+LCE G +E ACE+W+ + ++NC PD+A++STLIHWLC
Sbjct: 328  LLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLC 387

Query: 361  KKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 540
            K+GKV EAR +F EF +G++ SLLTYNTLIAG+CE GEL EA +LWDDM+EKG  PNAFT
Sbjct: 388  KEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFT 447

Query: 541  YNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQEINKVVALA 720
            YNMLIKGF K+GNAKEGIRI+EEML+  C+PNKSTY++LI+  L   GM+ E++KVV++A
Sbjct: 448  YNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEE-LCKMGMEGEVDKVVSMA 506

Query: 721  M-SNGVDGDLWNLFVKPVVGNVDCSAAELDRILIENA 828
            M S GVD D W+LF+   VGN+D  +  LD    ENA
Sbjct: 507  MASGGVDSDSWDLFLNKAVGNLDRGSKALDSFFKENA 543



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
 Frame = +1

Query: 319 PDSAVVSTLIHWLCKKGKVLEARSVFDEF-GKGSVASLLTYNTLIAGLCEGGELCEAARL 495
           P+    + LI  LCKK  V  A  V DE    G + +++TY T++ G    G++  A ++
Sbjct: 199 PNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKV 258

Query: 496 WDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLID 663
           + ++ ++G  P+A TY +L+ G+C+ G   + I++M++M E G  PN+ TY V+++
Sbjct: 259 FGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVE 314



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 4/241 (1%)
 Frame = +1

Query: 28  LVDGFCRQGRLVDAIKVMD--DMEENGVEPNEVTYGVMIEAYCKAKKSGEAVNLLEDMLG 201
           LV    RQ  L  A+++ +     +     N  TY  +I    +A+  G    LL D+  
Sbjct: 64  LVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHK 123

Query: 202 KGCLPGSALCCKVIDLLCEEGNVERACEVWRMVSRRNCGPDSAVVSTLIHWLCKKGKVLE 381
                G  +   VI      G  + A   +  +   N       ++TL++   +  +   
Sbjct: 124 SQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDL 183

Query: 382 ARSVFDEFGK--GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLI 555
             ++F       G + ++ T N LI  LC+  ++  A ++ D+M   G+ PN  TY  ++
Sbjct: 184 VHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTIL 243

Query: 556 KGFCKVGNAKEGIRIMEEMLEKGCLPNKSTYSVLIDGLLLSGGMKQEINKVVALAMSNGV 735
            G+   G+     ++  E+ ++G LP+ +TY++L++G    G +   I K++     NGV
Sbjct: 244 GGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAI-KLMDDMGENGV 302

Query: 736 D 738
           +
Sbjct: 303 E 303