BLASTX nr result

ID: Glycyrrhiza24_contig00022280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022280
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   166   2e-39
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   160   8e-38
ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...   142   2e-32
ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [...   136   2e-30
ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [...   134   8e-30

>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  166 bits (420), Expect = 2e-39
 Identities = 91/143 (63%), Positives = 98/143 (68%)
 Frame = -2

Query: 429 AQLIPLIQSRLVSQPKVXXXXXXXXXXSLPVSKQQVNSPXXXXXXXXXXXXXXXXXXXXX 250
           AQLIPL+QSR+VSQ KV           +PVSKQQV SP                     
Sbjct: 290 AQLIPLMQSRMVSQSKVNESNIGAQSSPVPVSKQQVTSPAVASESSAHANSSSDMSGQSG 349

Query: 249 XSKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVIVGNGMPSMHSQ 70
            SKARQT P SHLGS +NAGI G+SSDMA QQF+VHGRESQAP R  V+VGNGMPSMHSQ
Sbjct: 350 SSKARQTAPSSHLGSITNAGIAGNSSDMATQQFNVHGRESQAPPRQPVVVGNGMPSMHSQ 409

Query: 69  QSSANTNLGADHALNAKTSPSGP 1
           QSSANTNLGADH LNAKTS SGP
Sbjct: 410 QSSANTNLGADHPLNAKTSSSGP 432


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  160 bits (406), Expect = 8e-38
 Identities = 88/143 (61%), Positives = 96/143 (67%)
 Frame = -2

Query: 429 AQLIPLIQSRLVSQPKVXXXXXXXXXXSLPVSKQQVNSPXXXXXXXXXXXXXXXXXXXXX 250
           AQLIPL+QSR+VSQ KV           +PVSKQQV SP                     
Sbjct: 288 AQLIPLMQSRMVSQSKVNESSIGAQSSPVPVSKQQVTSPAVASESSAHANSSSDMSGQSG 347

Query: 249 XSKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVIVGNGMPSMHSQ 70
            SKARQT PPSHLGS +NAGI G+SS+MA QQF+V GRESQAP R  V+VGNGMPSMHSQ
Sbjct: 348 SSKARQTAPPSHLGSITNAGIAGNSSEMATQQFNVRGRESQAPPRQPVVVGNGMPSMHSQ 407

Query: 69  QSSANTNLGADHALNAKTSPSGP 1
           QSSANTN  ADH LNAKTS SGP
Sbjct: 408 QSSANTNFSADHPLNAKTSSSGP 430


>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
           gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
           [Medicago truncatula]
          Length = 2175

 Score =  142 bits (359), Expect = 2e-32
 Identities = 81/138 (58%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
 Frame = -2

Query: 429 AQLIPLIQSRLVSQPKVXXXXXXXXXXSLPVSKQQVNSPXXXXXXXXXXXXXXXXXXXXX 250
           A+LIP++QSR+V  PK            +PVSKQQVNSP                     
Sbjct: 274 AKLIPMMQSRMVLPPKAGESNVGAQSSPVPVSKQQVNSPAVASESSAHANSSSDVSGQSG 333

Query: 249 XSKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVIVGNGMPSMHSQ 70
            SKAR TVPPSHLG T+NAG   HSSDMAMQQF++HGRESQAPLR QV  GNGMPSMHSQ
Sbjct: 334 SSKARHTVPPSHLGPTTNAG---HSSDMAMQQFNIHGRESQAPLRQQVKAGNGMPSMHSQ 390

Query: 69  QSSANTNLG-ADHALNAK 19
           QSSA  NLG ADH+LN K
Sbjct: 391 QSSAAMNLGAADHSLNVK 408


>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  136 bits (342), Expect = 2e-30
 Identities = 74/142 (52%), Positives = 85/142 (59%)
 Frame = -2

Query: 429 AQLIPLIQSRLVSQPKVXXXXXXXXXXSLPVSKQQVNSPXXXXXXXXXXXXXXXXXXXXX 250
           AQLIPL+QSR+V QPK            +PVS QQV SP                     
Sbjct: 288 AQLIPLMQSRIVQQPKANDTNLGAMSSPVPVSNQQVTSPAVASESSAHANSSSDVSAQSG 347

Query: 249 XSKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVIVGNGMPSMHSQ 70
            +KARQT PPSHL    +AGI   SSDMA QQFS+HGR++Q  L+  V+  NGMPS+H Q
Sbjct: 348 SAKARQTAPPSHLSPPISAGIASSSSDMAAQQFSLHGRDAQGSLKQSVLTINGMPSVHPQ 407

Query: 69  QSSANTNLGADHALNAKTSPSG 4
           QSSAN NLGADH LN KTS SG
Sbjct: 408 QSSANMNLGADHPLNVKTSSSG 429


>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  134 bits (337), Expect = 8e-30
 Identities = 73/142 (51%), Positives = 85/142 (59%)
 Frame = -2

Query: 429 AQLIPLIQSRLVSQPKVXXXXXXXXXXSLPVSKQQVNSPXXXXXXXXXXXXXXXXXXXXX 250
           AQLIPL+QSR+V QPK            +PVS QQV SP                     
Sbjct: 287 AQLIPLMQSRMVQQPKANDTNLGSLSSPIPVSNQQVTSPAVASESSAHAHSSSDVSAQSG 346

Query: 249 XSKARQTVPPSHLGSTSNAGIPGHSSDMAMQQFSVHGRESQAPLRHQVIVGNGMPSMHSQ 70
            +KARQT PPSHL    +AGI   SSDMA  QFS+HGR++Q  L+  V+  NGMPS+H Q
Sbjct: 347 SAKARQTAPPSHLSPPISAGIASSSSDMAALQFSLHGRDAQGSLKQSVLTVNGMPSVHPQ 406

Query: 69  QSSANTNLGADHALNAKTSPSG 4
           QSSAN NLGADH LNAK+S SG
Sbjct: 407 QSSANMNLGADHPLNAKSSSSG 428


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