BLASTX nr result
ID: Glycyrrhiza24_contig00022256
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00022256
(330 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003553352.1| PREDICTED: uncharacterized protein LOC100789... 179 2e-43
ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817... 179 2e-43
ref|XP_003624721.1| Transcription factor IIIB 90 kDa subunit [Me... 140 1e-31
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ... 132 3e-29
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 132 3e-29
>ref|XP_003553352.1| PREDICTED: uncharacterized protein LOC100789154 [Glycine max]
Length = 639
Score = 179 bits (455), Expect = 2e-43
Identities = 89/110 (80%), Positives = 99/110 (90%)
Frame = -1
Query: 330 KYLSFSLGVNDENMANQALAFYKIAIERNFTRGRKSEQVQAACLYIAFRYVLGAVFLQLC 151
KYLSF LGVNDE+MA QAL FYKIA+ERNFTRGRKSEQV AACLYIAFRYVLGAVFLQLC
Sbjct: 119 KYLSFGLGVNDEHMAEQALTFYKIALERNFTRGRKSEQVHAACLYIAFRYVLGAVFLQLC 178
Query: 150 KALRLEEHPIVQKPVDPSLFIYKFANNLLKQRNVVVSETALSIVASMKRD 1
+ LRL EHPIVQKPVDPSLFI+++ NLLK+ + VS+TAL+IVASMKRD
Sbjct: 179 QVLRLGEHPIVQKPVDPSLFIHRYTKNLLKRGSKAVSDTALAIVASMKRD 228
>ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817609 [Glycine max]
Length = 604
Score = 179 bits (455), Expect = 2e-43
Identities = 89/110 (80%), Positives = 99/110 (90%)
Frame = -1
Query: 330 KYLSFSLGVNDENMANQALAFYKIAIERNFTRGRKSEQVQAACLYIAFRYVLGAVFLQLC 151
KYLSF LGVNDE+MA QAL FYKIA+ERNFTRGRKSEQV AACLYIAFRYVLGAVFLQLC
Sbjct: 79 KYLSFGLGVNDEHMAEQALTFYKIALERNFTRGRKSEQVHAACLYIAFRYVLGAVFLQLC 138
Query: 150 KALRLEEHPIVQKPVDPSLFIYKFANNLLKQRNVVVSETALSIVASMKRD 1
+ LRL EHPIVQKPVDPSLFI+++ NLLK+ + VS+TAL+IVASMKRD
Sbjct: 139 QVLRLGEHPIVQKPVDPSLFIHRYTKNLLKRGSKAVSDTALAIVASMKRD 188
>ref|XP_003624721.1| Transcription factor IIIB 90 kDa subunit [Medicago truncatula]
gi|355499736|gb|AES80939.1| Transcription factor IIIB 90
kDa subunit [Medicago truncatula]
Length = 608
Score = 140 bits (353), Expect = 1e-31
Identities = 71/129 (55%), Positives = 93/129 (72%), Gaps = 19/129 (14%)
Frame = -1
Query: 330 KYLSFSLGVNDENMANQALAFYKIAIERNFTRGRKSEQVQAACLYIAFR----------- 184
+YLS SLGV++ ++ QA AFY+IA+ +NFTRGRKSEQV+AACLY+AFR
Sbjct: 78 EYLSLSLGVSEGDVVRQARAFYEIALAKNFTRGRKSEQVRAACLYLAFRQNKKPYFLIEF 137
Query: 183 --------YVLGAVFLQLCKALRLEEHPIVQKPVDPSLFIYKFANNLLKQRNVVVSETAL 28
Y LG V+LQLC+ LRL+ HPIV+KP+DPSL+++K+ +NLL RN VVS TAL
Sbjct: 138 SNNLRINVYELGGVYLQLCEVLRLDNHPIVKKPIDPSLYLHKYTSNLLGHRNGVVSATAL 197
Query: 27 SIVASMKRD 1
+I+A M RD
Sbjct: 198 NIIAQMNRD 206
>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
vinifera]
Length = 529
Score = 132 bits (332), Expect = 3e-29
Identities = 74/129 (57%), Positives = 91/129 (70%), Gaps = 20/129 (15%)
Frame = -1
Query: 327 YLSFSLGVND-ENMANQALAFYKIAIERNFTRGRKSEQVQAACLYIAFR----------- 184
+++ ++GV+ +++ ALAFY IA+ERNFTRGR+ EQV AACLYIA R
Sbjct: 80 HIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAAACLYIACRENKKPFLLIDF 139
Query: 183 --------YVLGAVFLQLCKALRLEEHPIVQKPVDPSLFIYKFANNLLKQRNVVVSETAL 28
YVLGAVFLQLCK L LEEHPIVQKPVDPSLFI++FA L + N+ VS+TAL
Sbjct: 140 SEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFIHRFAAGLPGETNMGVSKTAL 199
Query: 27 SIVASMKRD 1
I+ASMKRD
Sbjct: 200 RIIASMKRD 208
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 132 bits (332), Expect = 3e-29
Identities = 74/129 (57%), Positives = 91/129 (70%), Gaps = 20/129 (15%)
Frame = -1
Query: 327 YLSFSLGVND-ENMANQALAFYKIAIERNFTRGRKSEQVQAACLYIAFR----------- 184
+++ ++GV+ +++ ALAFY IA+ERNFTRGR+ EQV AACLYIA R
Sbjct: 80 HIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAAACLYIACRENKKPFLLIDF 139
Query: 183 --------YVLGAVFLQLCKALRLEEHPIVQKPVDPSLFIYKFANNLLKQRNVVVSETAL 28
YVLGAVFLQLCK L LEEHPIVQKPVDPSLFI++FA L + N+ VS+TAL
Sbjct: 140 SEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFIHRFAAGLPGETNMGVSKTAL 199
Query: 27 SIVASMKRD 1
I+ASMKRD
Sbjct: 200 RIIASMKRD 208