BLASTX nr result

ID: Glycyrrhiza24_contig00022245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022245
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533174.1| PREDICTED: WW domain-containing oxidoreducta...   175   3e-42
ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32,...   165   4e-39
ref|XP_003634100.1| PREDICTED: short-chain dehydrogenase TIC 32,...   164   7e-39
ref|XP_002270039.1| PREDICTED: short-chain dehydrogenase TIC 32,...   164   7e-39
ref|XP_003634099.1| PREDICTED: short-chain dehydrogenase TIC 32,...   164   7e-39

>ref|XP_003533174.1| PREDICTED: WW domain-containing oxidoreductase-like [Glycine max]
          Length = 314

 Score =  175 bits (444), Expect = 3e-42
 Identities = 92/105 (87%), Positives = 95/105 (90%)
 Frame = -2

Query: 316 KGPSGFSASSTAEEVTHGIDATALTAIVTGATSGIGIETARVLALRGVHVVMGIRNMAAG 137
           KGPSGFSASSTAEEVT GID + LTAIVTGATSGIG+ETAR LALRGVHVVMGIRNM AG
Sbjct: 7   KGPSGFSASSTAEEVTQGIDGSDLTAIVTGATSGIGVETARALALRGVHVVMGIRNMTAG 66

Query: 136 GEIKETILRNNSTAKIDIMELDLSSMESVRKFASQFNSSGLPLNI 2
           GEIKETILR N  AKID+MELDLSSMESVR FASQFNS GLPLNI
Sbjct: 67  GEIKETILRYNPIAKIDMMELDLSSMESVRTFASQFNSRGLPLNI 111


>ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|302143828|emb|CBI22689.3| unnamed protein
           product [Vitis vinifera]
          Length = 313

 Score =  165 bits (417), Expect = 4e-39
 Identities = 84/105 (80%), Positives = 93/105 (88%)
 Frame = -2

Query: 316 KGPSGFSASSTAEEVTHGIDATALTAIVTGATSGIGIETARVLALRGVHVVMGIRNMAAG 137
           KGPSGFSASSTAEEVT GID T LTAIVTGA+SGIG ET RVLALRGVHVVMG+RNM+AG
Sbjct: 7   KGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGVRNMSAG 66

Query: 136 GEIKETILRNNSTAKIDIMELDLSSMESVRKFASQFNSSGLPLNI 2
            E+KE I++   TAK+D MELDLSSM SVRKFAS++NSSGLPLNI
Sbjct: 67  KEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNI 111


>ref|XP_003634100.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Vitis vinifera]
          Length = 281

 Score =  164 bits (415), Expect = 7e-39
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = -2

Query: 316 KGPSGFSASSTAEEVTHGIDATALTAIVTGATSGIGIETARVLALRGVHVVMGIRNMAAG 137
           KG SGFS SSTAEEVT GID T LTAIVTGA+SGIG ET RVLALRGVHVVMG+RNMAAG
Sbjct: 7   KGASGFSGSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGVRNMAAG 66

Query: 136 GEIKETILRNNSTAKIDIMELDLSSMESVRKFASQFNSSGLPLNI 2
            E+KE I++   TAK+D+MELDLSSM SVRKFAS+FNSSGLPLNI
Sbjct: 67  QEVKEAIVKEIPTAKVDVMELDLSSMASVRKFASEFNSSGLPLNI 111


>ref|XP_002270039.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           isoform 1 [Vitis vinifera]
          Length = 306

 Score =  164 bits (415), Expect = 7e-39
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = -2

Query: 316 KGPSGFSASSTAEEVTHGIDATALTAIVTGATSGIGIETARVLALRGVHVVMGIRNMAAG 137
           KG SGFS SSTAEEVT GID T LTAIVTGA+SGIG ET RVLALRGVHVVMG+RNMAAG
Sbjct: 7   KGASGFSGSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGVRNMAAG 66

Query: 136 GEIKETILRNNSTAKIDIMELDLSSMESVRKFASQFNSSGLPLNI 2
            E+KE I++   TAK+D+MELDLSSM SVRKFAS+FNSSGLPLNI
Sbjct: 67  QEVKEAIVKEIPTAKVDVMELDLSSMASVRKFASEFNSSGLPLNI 111


>ref|XP_003634099.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Vitis vinifera] gi|302143829|emb|CBI22690.3| unnamed
           protein product [Vitis vinifera]
          Length = 313

 Score =  164 bits (415), Expect = 7e-39
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = -2

Query: 316 KGPSGFSASSTAEEVTHGIDATALTAIVTGATSGIGIETARVLALRGVHVVMGIRNMAAG 137
           KG SGFS SSTAEEVT GID T LTAIVTGA+SGIG ET RVLALRGVHVVMG+RNMAAG
Sbjct: 7   KGASGFSGSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGVRNMAAG 66

Query: 136 GEIKETILRNNSTAKIDIMELDLSSMESVRKFASQFNSSGLPLNI 2
            E+KE I++   TAK+D+MELDLSSM SVRKFAS+FNSSGLPLNI
Sbjct: 67  QEVKEAIVKEIPTAKVDVMELDLSSMASVRKFASEFNSSGLPLNI 111


Top