BLASTX nr result

ID: Glycyrrhiza24_contig00022215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022215
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helica...   162   3e-38
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   145   3e-33
emb|CBI26949.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica...   141   5e-32
ref|XP_003535131.1| PREDICTED: probable ATP-dependent RNA helica...   137   9e-31

>ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1209

 Score =  162 bits (409), Expect = 3e-38
 Identities = 83/99 (83%), Positives = 89/99 (89%)
 Frame = +2

Query: 2   SFPDLSFARSSSNGSLGTDEGLFEQSEPLASSTAVAEKILSRISLQMRNQQQAWQESPEG 181
           SF DLS ARSSSNGS+GTDEGLFE  EPLASS A  EKIL + SLQMR+QQQAWQESPEG
Sbjct: 246 SFSDLSSARSSSNGSIGTDEGLFELPEPLASSNAYMEKILRQRSLQMRDQQQAWQESPEG 305

Query: 182 RRMLEFRSSLPAYKEKEAILSVVSRNQVVIISGQTGCGK 298
           RRMLEFR SLPAYK+KEAILSV+SRNQVVIISG+TGCGK
Sbjct: 306 RRMLEFRRSLPAYKKKEAILSVISRNQVVIISGETGCGK 344


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1172

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/98 (73%), Positives = 84/98 (85%)
 Frame = +2

Query: 5   FPDLSFARSSSNGSLGTDEGLFEQSEPLASSTAVAEKILSRISLQMRNQQQAWQESPEGR 184
           FPD S +RSSSN SL TDEGLFE +E LASS AV EKIL R SLQ+R+QQ AWQESPEGR
Sbjct: 211 FPDFSSSRSSSNSSLATDEGLFEPTESLASSKAVMEKILQRRSLQLRDQQHAWQESPEGR 270

Query: 185 RMLEFRSSLPAYKEKEAILSVVSRNQVVIISGQTGCGK 298
           ++LEFR +LPAYKEK+AI + +S+NQVVIISG+TGCGK
Sbjct: 271 KILEFRKNLPAYKEKDAISTAISQNQVVIISGETGCGK 308


>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/99 (69%), Positives = 84/99 (84%)
 Frame = +2

Query: 2   SFPDLSFARSSSNGSLGTDEGLFEQSEPLASSTAVAEKILSRISLQMRNQQQAWQESPEG 181
           +F D++F+RSSS  S+ TDEGLFEQ EPLA S +V EKI+ R SLQ+RNQQQAWQES EG
Sbjct: 215 NFQDIAFSRSSSTSSIATDEGLFEQPEPLAVSRSVIEKIVWRRSLQLRNQQQAWQESTEG 274

Query: 182 RRMLEFRSSLPAYKEKEAILSVVSRNQVVIISGQTGCGK 298
           R+MLEFR SLPA KEK+A+L+ +S NQVVI+SG+TGCGK
Sbjct: 275 RKMLEFRGSLPASKEKDALLTAISGNQVVIVSGETGCGK 313


>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1195

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/99 (69%), Positives = 84/99 (84%)
 Frame = +2

Query: 2   SFPDLSFARSSSNGSLGTDEGLFEQSEPLASSTAVAEKILSRISLQMRNQQQAWQESPEG 181
           +F D++F+RSSS  S+ TDEGLFEQ EPLA S +V EKI+ R SLQ+RNQQQAWQES EG
Sbjct: 229 NFQDIAFSRSSSTSSIATDEGLFEQPEPLAVSRSVIEKIVWRRSLQLRNQQQAWQESTEG 288

Query: 182 RRMLEFRSSLPAYKEKEAILSVVSRNQVVIISGQTGCGK 298
           R+MLEFR SLPA KEK+A+L+ +S NQVVI+SG+TGCGK
Sbjct: 289 RKMLEFRGSLPASKEKDALLTAISGNQVVIVSGETGCGK 327


>ref|XP_003535131.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1093

 Score =  137 bits (345), Expect = 9e-31
 Identities = 69/99 (69%), Positives = 83/99 (83%)
 Frame = +2

Query: 2   SFPDLSFARSSSNGSLGTDEGLFEQSEPLASSTAVAEKILSRISLQMRNQQQAWQESPEG 181
           SFPD+  ARS++NG++GTDE +F+    LASS AV  KIL + SLQM +QQ+AWQESPEG
Sbjct: 134 SFPDMWSARSANNGNIGTDERVFDPPRSLASSRAVVGKILCQRSLQMCDQQRAWQESPEG 193

Query: 182 RRMLEFRSSLPAYKEKEAILSVVSRNQVVIISGQTGCGK 298
           R +LEFRSSLPAYKEKEAILS + RNQV+IISG+TGCGK
Sbjct: 194 RTILEFRSSLPAYKEKEAILSAILRNQVLIISGETGCGK 232


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