BLASTX nr result

ID: Glycyrrhiza24_contig00022213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022213
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544248.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   242   3e-62
ref|XP_003518265.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   241   5e-62
ref|XP_003615310.1| Protein VERNALIZATION INSENSITIVE [Medicago ...   233   2e-59
ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   157   8e-37
ref|XP_004163957.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   140   1e-31

>ref|XP_003544248.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 633

 Score =  242 bits (617), Expect = 3e-62
 Identities = 130/184 (70%), Positives = 141/184 (76%), Gaps = 21/184 (11%)
 Frame = +2

Query: 5   GGGNHSR-------GTSVDIYAQHQINIAAENHQGDSA--------------KHILLNIR 121
           GGGN  R       GT VD+  Q +I   AE H  +SA              KHI+LNIR
Sbjct: 452 GGGNRFRWSPQRPSGTGVDMCTQDRIT--AEIHPTESANSDMKLSTGEHPGKKHIILNIR 509

Query: 122 DRFEEFLTKPPPVEPFLYKNFAAVPPSTPSKSNEMRQIPGLSSRKFLKENDYEYSVRVVK 301
            RFEEFL+KP PVEPF YKN AAV PSTPSKS EMRQIPGL+SRK  KENDYEYSVRVVK
Sbjct: 510 SRFEEFLSKPQPVEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKRSKENDYEYSVRVVK 569

Query: 302 WLEHQGHIDELFRVKFLTWFSLKANQQERRVVSAFVDALIDDPASLADQLMHTFTDEIGC 481
           WLEHQGHIDE+FRV+FLTWFSLKA QQERRVVSAFVDALIDDPASLADQL+HTF+DEI C
Sbjct: 570 WLEHQGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICC 629

Query: 482 EQRS 493
           EQ+S
Sbjct: 630 EQKS 633


>ref|XP_003518265.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 630

 Score =  241 bits (615), Expect = 5e-62
 Identities = 129/183 (70%), Positives = 142/183 (77%), Gaps = 21/183 (11%)
 Frame = +2

Query: 8   GGNHSR-------GTSVDIYAQHQINIAAENHQGDSA--------------KHILLNIRD 124
           GGN  R       GT V++ AQ++I   AE H  +SA              KHI+LNIR 
Sbjct: 450 GGNRFRWSPQRPSGTGVNMCAQNRIT--AEIHPTESANSEMKLSSGEHPGKKHIILNIRS 507

Query: 125 RFEEFLTKPPPVEPFLYKNFAAVPPSTPSKSNEMRQIPGLSSRKFLKENDYEYSVRVVKW 304
           RFEEFL+KP PVEPF YKN AAV PSTPSKS EMRQIPGL+SRKF KENDYEYSVRVVKW
Sbjct: 508 RFEEFLSKPQPVEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKFSKENDYEYSVRVVKW 567

Query: 305 LEHQGHIDELFRVKFLTWFSLKANQQERRVVSAFVDALIDDPASLADQLMHTFTDEIGCE 484
           LEHQGHIDE+FRV+FLTWFSLKA QQERRVVSAFVDALIDDPASLADQL+HTF+DEI CE
Sbjct: 568 LEHQGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCE 627

Query: 485 QRS 493
            +S
Sbjct: 628 PKS 630


>ref|XP_003615310.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula]
           gi|355516645|gb|AES98268.1| Protein VERNALIZATION
           INSENSITIVE [Medicago truncatula]
          Length = 588

 Score =  233 bits (593), Expect = 2e-59
 Identities = 119/160 (74%), Positives = 135/160 (84%)
 Frame = +2

Query: 14  NHSRGTSVDIYAQHQINIAAENHQGDSAKHILLNIRDRFEEFLTKPPPVEPFLYKNFAAV 193
           NHS   +V+  A  QI I AE       KH+LLNI +  EEFL+KPP  EPF +K+FAA+
Sbjct: 439 NHS---TVNTCAPDQIKIPAE-------KHMLLNIPNWIEEFLSKPPTAEPFSHKSFAAI 488

Query: 194 PPSTPSKSNEMRQIPGLSSRKFLKENDYEYSVRVVKWLEHQGHIDELFRVKFLTWFSLKA 373
           PP+TPSKSNEMRQ+ GL+SRK +KENDYEYSVRVVKWLEHQGHIDE+FRVKFLTWFSLKA
Sbjct: 489 PPATPSKSNEMRQMTGLNSRKRVKENDYEYSVRVVKWLEHQGHIDEIFRVKFLTWFSLKA 548

Query: 374 NQQERRVVSAFVDALIDDPASLADQLMHTFTDEIGCEQRS 493
           NQQERRVVSAFVDALIDDPASLADQL+HTFTDEI C+Q+S
Sbjct: 549 NQQERRVVSAFVDALIDDPASLADQLIHTFTDEICCDQKS 588


>ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 617

 Score =  157 bits (398), Expect = 8e-37
 Identities = 76/115 (66%), Positives = 94/115 (81%)
 Frame = +2

Query: 149 PPPVEPFLYKNFAAVPPSTPSKSNEMRQIPGLSSRKFLKENDYEYSVRVVKWLEHQGHID 328
           PPP+E       ++VPPSTPSK+++M ++PGL S+K ++E+DYEYSVRV+KWLE QGHI 
Sbjct: 491 PPPMEAVPLLIPSSVPPSTPSKTDKMHEVPGLGSKKQIRESDYEYSVRVIKWLECQGHIA 550

Query: 329 ELFRVKFLTWFSLKANQQERRVVSAFVDALIDDPASLADQLMHTFTDEIGCEQRS 493
           E FRVKFLTWFSLKA  QERRVVS FVD LIDDP SLA+QL+H+F DEI  +Q+S
Sbjct: 551 EDFRVKFLTWFSLKATMQERRVVSVFVDTLIDDPPSLAEQLIHSFMDEICYDQKS 605


>ref|XP_004163957.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus]
          Length = 619

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/124 (55%), Positives = 88/124 (70%)
 Frame = +2

Query: 119 RDRFEEFLTKPPPVEPFLYKNFAAVPPSTPSKSNEMRQIPGLSSRKFLKENDYEYSVRVV 298
           + ++E     P P          +V PSTP K++E R + G + ++  +E+DY+YSVR+V
Sbjct: 485 KSKWESHYKNPSPKNSITPMKPISVCPSTPCKTSETRILLGSNCKRRTEESDYDYSVRIV 544

Query: 299 KWLEHQGHIDELFRVKFLTWFSLKANQQERRVVSAFVDALIDDPASLADQLMHTFTDEIG 478
           KWLEH  HIDE FRVKFLTWFSLKA+ ++RRVVSAF+DALIDDP SLA QL HTF DEI 
Sbjct: 545 KWLEHDEHIDEDFRVKFLTWFSLKASVRDRRVVSAFIDALIDDPPSLAGQLSHTFMDEIF 604

Query: 479 CEQR 490
           C Q+
Sbjct: 605 CNQK 608


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