BLASTX nr result

ID: Glycyrrhiza24_contig00022212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022212
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236320.1| uncharacterized protein LOC100306272 [Glycin...    55   6e-06
ref|XP_003544809.1| PREDICTED: cytochrome c oxidase subunit 6b-1...    55   8e-06

>ref|NP_001236320.1| uncharacterized protein LOC100306272 [Glycine max]
           gi|255628065|gb|ACU14377.1| unknown [Glycine max]
          Length = 174

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
 Frame = +2

Query: 62  KTAEQT----PAVAEGSSEVTTTPPTDQSNDPTPDASEEVSNDAATEQSSGNTEEENASD 229
           KT E+T    PAVA+ SSEVT  PPT++S +               EQSSGN EE N+ +
Sbjct: 49  KTVEETTPVAPAVAQESSEVTP-PPTEESTE---------------EQSSGNVEE-NSGN 91

Query: 230 QDAAAEEAPQIKLETAPA 283
           +D A EE P+IKLETAPA
Sbjct: 92  EDVA-EETPEIKLETAPA 108


>ref|XP_003544809.1| PREDICTED: cytochrome c oxidase subunit 6b-1-like [Glycine max]
          Length = 175

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
 Frame = +2

Query: 62  KTAEQT----PAVAEGSSEVTTTPPTDQSNDPTPDASEEVSNDAATEQSSGNTEEENASD 229
           KT E+T    PAVA+ SSEVT  PP ++S +               EQSSGN EE N+ +
Sbjct: 50  KTVEETTPVAPAVAQESSEVTP-PPAEESTE---------------EQSSGNVEE-NSGN 92

Query: 230 QDAAAEEAPQIKLETAPA 283
           +DAA EE P+IKLETAPA
Sbjct: 93  EDAA-EETPEIKLETAPA 109


Top