BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022205
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containi...   306   1e-81
ref|XP_003617141.1| Pentatricopeptide repeat-containing protein ...   289   1e-76
ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...   239   2e-61
emb|CBI26264.3| unnamed protein product [Vitis vinifera]              234   7e-60
ref|XP_002517126.1| pentatricopeptide repeat-containing protein,...   226   2e-57

>ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  306 bits (783), Expect = 1e-81
 Identities = 147/167 (88%), Positives = 155/167 (92%)
 Frame = +1

Query: 1   FLCNHLVNMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRE 180
           FLCNHLVNMYSKLDLPNSAQ VLSLT+ RTVVTWTSLISGCVHN RF +ALLHFSNMRRE
Sbjct: 44  FLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRE 103

Query: 181 CVHPNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEA 360
           CV PNDFT+PCVFKASASL MP+TGKQ+HALA KGG I DVFVGCSAFDMYSKTGLR EA
Sbjct: 104 CVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEA 163

Query: 361 RNMFDEMPHRNLATWNAYISNAVQDGRSLDAICAFKEFLCVDGEPNS 501
           RNMFDEMPHRNLATWNAY+SNAVQDGR LDAI AFK+FLCVDGEPN+
Sbjct: 164 RNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNA 210



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 58/156 (37%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
 Frame = +1

Query: 10  NHLVNMYSKLDLPNSAQHVLSL--THLRTVVTWTSLISGCVHNGRFVTALLHFSNMRREC 183
           N L++ Y K     S++ V S   +  R VV+W SL++  V N     A + F   R+E 
Sbjct: 249 NGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE- 307

Query: 184 VHPNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEAR 363
           V P DF    V  A A L     G+ VHALA K     ++FVG +  D+Y K G    A 
Sbjct: 308 VEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAE 367

Query: 364 NMFDEMPHRNLATWNAYISNAVQDGRSLDAICAFKE 471
            +F EMP RNL TWNA I      G    A+  F+E
Sbjct: 368 QVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQE 403



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 2/150 (1%)
 Frame = +1

Query: 22  NMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRECVHPNDF 201
           +MYSK  L   A+++      R + TW + +S  V +GR + A+  F         PN  
Sbjct: 152 DMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAI 211

Query: 202 TYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEARNMFDEM 381
           T+     A A +     G+Q+H    +     DV V     D Y K G  V +  +F  +
Sbjct: 212 TFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRI 271

Query: 382 --PHRNLATWNAYISNAVQDGRSLDAICAF 465
               RN+ +W + ++  VQ+     A   F
Sbjct: 272 GSGRRNVVSWCSLLAALVQNHEEERACMVF 301


>ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518476|gb|AET00100.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  289 bits (740), Expect = 1e-76
 Identities = 140/167 (83%), Positives = 148/167 (88%)
 Frame = +1

Query: 1   FLCNHLVNMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRE 180
           FL NHLVNMYSKLDL NSAQHVLSLTHLRTVVTWTSLISGCVHN RF+ ALLHF+NMRR+
Sbjct: 43  FLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRD 102

Query: 181 CVHPNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEA 360
            V PNDFT+PCVFKASA +Q+PMTGKQ+H LA KGG IYDVFVGCS FDMY KTG R +A
Sbjct: 103 NVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDA 162

Query: 361 RNMFDEMPHRNLATWNAYISNAVQDGRSLDAICAFKEFLCVDGEPNS 501
            NMFDEMP RNLATWNAYISNAVQD RSLDAI AFKEFLCV GEPNS
Sbjct: 163 CNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNS 209



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 56/157 (35%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
 Frame = +1

Query: 4   LCNHLVNMYSKLDLPNSAQHVLS-LTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRE 180
           + N L++ Y K     SA+ V + + + + VV+W S+++  V N     A + F   R+E
Sbjct: 246 VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE 305

Query: 181 CVHPNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEA 360
            V P DF    V  A A L     G+ VHALA K     ++FVG +  DMY K G    A
Sbjct: 306 -VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENA 364

Query: 361 RNMFDEMPHRNLATWNAYISNAVQDGRSLDAICAFKE 471
             +F E+P RNL TWNA I      G    A+  F+E
Sbjct: 365 EQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEE 401



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
 Frame = +1

Query: 22  NMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRECVH--PN 195
           +MY K      A ++      R + TW + IS  V + R + A++ F      CVH  PN
Sbjct: 151 DMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFL--CVHGEPN 208

Query: 196 DFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEARNMFD 375
             T+     A   +     G+Q+HA   + G   DV V     D Y K G  V A  +F+
Sbjct: 209 SITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFN 268

Query: 376 EMPHR-NLATWNAYISNAVQDGRSLDAICAF 465
            + +R N+ +W + ++  VQ+     A   F
Sbjct: 269 RIGNRKNVVSWCSMLAALVQNHEEERACMVF 299


>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  239 bits (610), Expect = 2e-61
 Identities = 117/166 (70%), Positives = 133/166 (80%)
 Frame = +1

Query: 1   FLCNHLVNMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRE 180
           F+ NHLVNMYSKLD PNSAQ +LSLT  R+VVTWT+LI+G V NGRF +AL HFSNMRR+
Sbjct: 43  FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRD 102

Query: 181 CVHPNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEA 360
            + PNDFT+PC FKAS SL+ P+ GKQVHALA K GQI DVFVGCSAFDMYSK GL  EA
Sbjct: 103 SIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEA 162

Query: 361 RNMFDEMPHRNLATWNAYISNAVQDGRSLDAICAFKEFLCVDGEPN 498
           R MFDEMP RN+ATWNAY+SN+V +GR  DA+ AF EF     EPN
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPN 208



 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/159 (35%), Positives = 76/159 (47%)
 Frame = +1

Query: 4   LCNHLVNMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRREC 183
           + N L++ Y K      ++ + S       V+W S+I   V N     A L F   R+E 
Sbjct: 246 VANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEG 305

Query: 184 VHPNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEAR 363
           + P DF    V  A A L +   GK VH LA K   + ++FVG +  DMY K G   +A 
Sbjct: 306 IEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAE 365

Query: 364 NMFDEMPHRNLATWNAYISNAVQDGRSLDAICAFKEFLC 480
             FDEMP RNL TWNA I      G++  A+  F E  C
Sbjct: 366 RAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTC 404



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/148 (27%), Positives = 59/148 (39%)
 Frame = +1

Query: 22  NMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRECVHPNDF 201
           +MYSK  L   A+ +      R + TW + +S  V  GR+  AL  F   R E   PN  
Sbjct: 151 DMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLI 210

Query: 202 TYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEARNMFDEM 381
           T+     A A       G+Q+H    + G   DV V     D Y K      +  +F  +
Sbjct: 211 TFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGI 270

Query: 382 PHRNLATWNAYISNAVQDGRSLDAICAF 465
              N  +W + I + VQ+     A   F
Sbjct: 271 SKPNDVSWCSMIVSYVQNDEEEKACLVF 298


>emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  234 bits (596), Expect = 7e-60
 Identities = 113/157 (71%), Positives = 129/157 (82%)
 Frame = +1

Query: 1   FLCNHLVNMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRE 180
           F+ NHLVNMYSKLD PNSAQ +LSLT  R+VVTWT+LI+G V NGRF +AL HFSNMRR+
Sbjct: 43  FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRD 102

Query: 181 CVHPNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEA 360
            + PNDFT+PC FKAS SL+ P+ GKQVHALA K GQI DVFVGCSAFDMYSK GL  EA
Sbjct: 103 SIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEA 162

Query: 361 RNMFDEMPHRNLATWNAYISNAVQDGRSLDAICAFKE 471
           R MFDEMP RN+ATWNAY+SN+V +GR  DA+ AF E
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIE 199



 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/153 (38%), Positives = 77/153 (50%)
 Frame = +1

Query: 22  NMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRECVHPNDF 201
           +MYSK  L   A+ +      R + TW + +S  V  GR+  AL  F   R+E + P DF
Sbjct: 151 DMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDF 210

Query: 202 TYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEARNMFDEM 381
               V  A A L +   GK VH LA K   + ++FVG +  DMY K G   +A   FDEM
Sbjct: 211 MVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEM 270

Query: 382 PHRNLATWNAYISNAVQDGRSLDAICAFKEFLC 480
           P RNL TWNA I      G++  A+  F E  C
Sbjct: 271 PERNLVTWNAMIGGYAHQGQADMAVTLFDEMTC 303


>ref|XP_002517126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543761|gb|EEF45289.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 463

 Score =  226 bits (575), Expect = 2e-57
 Identities = 112/167 (67%), Positives = 129/167 (77%)
 Frame = +1

Query: 1   FLCNHLVNMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRE 180
           FL NHL++MYSKLDLPNSAQ VL LT  R+VVTWTSLISG V NG F  AL HF NMRR+
Sbjct: 43  FLSNHLISMYSKLDLPNSAQLVLHLTPTRSVVTWTSLISGSVQNGHFSFALYHFFNMRRD 102

Query: 181 CVHPNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEA 360
            + PNDFT+PC FKASASL +P  GKQ+HA+A K GQI DVFVGCSAFDMYSKTGL+ +A
Sbjct: 103 NIQPNDFTFPCAFKASASLLLPFVGKQIHAIAVKFGQINDVFVGCSAFDMYSKTGLKQDA 162

Query: 361 RNMFDEMPHRNLATWNAYISNAVQDGRSLDAICAFKEFLCVDGEPNS 501
           + +FDE+P RN+ TWNAYISNAV  GR  +A  AF E      EP+S
Sbjct: 163 QKLFDELPERNVVTWNAYISNAVLYGRYQNAAVAFVELRRAGCEPDS 209



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 55/154 (35%), Positives = 72/154 (46%)
 Frame = +1

Query: 10  NHLVNMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRECVH 189
           N L++ Y K      A+ V      R  V+W S+++ C  NG    A L F   R+E + 
Sbjct: 248 NGLIDFYGKCKEVRLAEMVFGKMENRNAVSWCSMVAACEQNGEEEKACLFFVEGRKEGIE 307

Query: 190 PNDFTYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEARNM 369
           P D+    V  A A L     G+  HALA K     D+FVG +  DMY K G   ++   
Sbjct: 308 PTDYMVSSVISACAGLAGLELGRSFHALAVKACLEGDIFVGSALVDMYGKCGGIEDSEQA 367

Query: 370 FDEMPHRNLATWNAYISNAVQDGRSLDAICAFKE 471
           F EM  RNL TWNA I      G +  A+  FKE
Sbjct: 368 FHEMSERNLVTWNALIGGYAHQGHAEMAVRLFKE 401



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/150 (30%), Positives = 65/150 (43%)
 Frame = +1

Query: 22  NMYSKLDLPNSAQHVLSLTHLRTVVTWTSLISGCVHNGRFVTALLHFSNMRRECVHPNDF 201
           +MYSK  L   AQ +      R VVTW + IS  V  GR+  A + F  +RR    P+  
Sbjct: 151 DMYSKTGLKQDAQKLFDELPERNVVTWNAYISNAVLYGRYQNAAVAFVELRRAGCEPDST 210

Query: 202 TYPCVFKASASLQMPMTGKQVHALAFKGGQIYDVFVGCSAFDMYSKTGLRVEARNMFDEM 381
           T+   F A A       G+Q+H    + G    V V     D Y K      A  +F +M
Sbjct: 211 TFCVFFNACADQLYVDLGRQLHGFVIRSGFEKSVSVLNGLIDFYGKCKEVRLAEMVFGKM 270

Query: 382 PHRNLATWNAYISNAVQDGRSLDAICAFKE 471
            +RN  +W + ++   Q+G    A   F E
Sbjct: 271 ENRNAVSWCSMVAACEQNGEEEKACLFFVE 300