BLASTX nr result

ID: Glycyrrhiza24_contig00022197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022197
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608851.1| F-box family-6 [Medicago truncatula] gi|3555...   300   3e-79
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...   111   2e-22
ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box pro...    90   5e-16
ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus ...    86   7e-15
ref|XP_003540740.1| PREDICTED: putative F-box protein At3g58860-...    84   4e-14

>ref|XP_003608851.1| F-box family-6 [Medicago truncatula] gi|355509906|gb|AES91048.1|
           F-box family-6 [Medicago truncatula]
          Length = 447

 Score =  300 bits (767), Expect = 3e-79
 Identities = 155/228 (67%), Positives = 176/228 (77%), Gaps = 1/228 (0%)
 Frame = +3

Query: 3   SLKLKCLEFVRCSELRNLEIFAEKLVSFRYCGWPLDIEFKSVPSLVELAFGGLYVDIVRE 182
           SLKLKCLE VRC EL  +EIFAEKLVSF+Y G  L+ EFKSVP L E +FGG +V+ VRE
Sbjct: 222 SLKLKCLELVRCWELTKIEIFAEKLVSFKYYGSHLETEFKSVPCLEEASFGGSFVEFVRE 281

Query: 183 SLLSQIKVLKLDITLNIPEVIYWLSELPKLKNLKHLEVVVSFDNNFTLDACALLLKASPS 362
           S L QIKVLKLDIT N PEVIYWLS+LPKLKNLKHLE+V   D+   + AC +LLKASPS
Sbjct: 282 SFLPQIKVLKLDITQNSPEVIYWLSQLPKLKNLKHLELVACADDG--ISACVMLLKASPS 339

Query: 363 LWRFTVKMQTTRPSLRTEWEYTKECQNSLKELELVMFCGAASEVEFFMYVLENTIGLQKI 542
           LWR  +KM  T+P+  TE ++T EC  +LKELELV FCGAA EVE  MY+LENT  LQKI
Sbjct: 340 LWRLKIKMLNTKPTYITEHKFTMECHYNLKELELVGFCGAACEVELVMYILENTDELQKI 399

Query: 543 TIDTRLPTKPKLRPTG-EHLRTWGHEENRNRAWRLREKIPPGIEFVCL 683
           TIDTRLPTKPKLRP   EH  TW  EE +  AWRL++KIPP IEFVCL
Sbjct: 400 TIDTRLPTKPKLRPLDEEHFETWDLEEKKRCAWRLKDKIPPCIEFVCL 447


>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score =  111 bits (277), Expect = 2e-22
 Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
 Frame = +3

Query: 3   SLKLKCLEFVRCSELRNLEIFAEKLVSFRYCGWPLDIEFKSVPSLVELAFGGLYVDIVRE 182
           SLKLK LE V C+ L+ LEI A  LVSF+Y G  + + FKSVP+LV+ +FGG +  +  E
Sbjct: 229 SLKLKYLEMVCCNNLKYLEITAASLVSFKYYGPLIGLPFKSVPNLVDASFGGPFCQLTIE 288

Query: 183 SL------LSQIKVLKLDITLNIPEVIYWLSELPK----LKNLKHLEVVVSFDN-NFTLD 329
           +L      + Q++ L+ D+        Y + E P     L N+KHLEV  +       L 
Sbjct: 289 NLYQFSLYILQLETLRFDV-----GSAYLMREFPTNFPILSNVKHLEVTTAVSAVAHCLF 343

Query: 330 ACALLLKASPSLWRFTVKM------QTTRPSLRTEWEYTKECQNSLKELELVMFCGAASE 491
            C  LLK  P L RFT+K+         R S +   +++  C   LK +E++ F G A+E
Sbjct: 344 PCLSLLKGCPLLHRFTLKVISCESTLVCRASQKVPEDHSHPC---LKVVEVLGFQGNAAE 400

Query: 492 VEFFMYVLENTIGLQKITIDTRLPTKPKLRPTGEHLRTWGHEENRNRAWRLREKIPPGIE 671
           VE  +Y L N   L+ + I    P   +     +   T  ++  +  A  L  ++PPG++
Sbjct: 401 VELVLYFLRNAAVLKNLIISPCAPCYLRSPSQLKFKETELYQSAKQHAVELGARVPPGVD 460

Query: 672 FVCL 683
           FV L
Sbjct: 461 FVVL 464


>ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box protein At5g56700-like
           [Cucumis sativus] gi|449501454|ref|XP_004161371.1|
           PREDICTED: putative FBD-associated F-box protein
           At5g56700-like [Cucumis sativus]
          Length = 475

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
 Frame = +3

Query: 3   SLKLKCLEFVRCSELRNLEIFAEKLVSFRYCGWPLDIEFKSVPSLVELAFGGLY-VDIVR 179
           SLKL+ LE   C+ L +LE+ A  L SF+Y G  L +  K+ P L+E  FG  + V+I+ 
Sbjct: 245 SLKLRQLEVCMCNYLESLEVSAPNLESFKYVGPWLSMPLKNTPKLLETYFGSEFGVEIID 304

Query: 180 ESLL-----SQIKVLKLDITLNIPEVIYWLSELPKLKNLKHLEVVVSFDNNFTLDACALL 344
              L     SQ++ L LD+ ++  E      + P L NLK L+++V  + + +L     L
Sbjct: 305 HFFLLSSYSSQLQKLILDLEVDFME-NQGFRKWPILANLKELKLIVIAEGHSSLIGFTSL 363

Query: 345 LKASPSLWRFTVK-----MQTTRPSLRTEWEYTKECQNSLKELELVMFCGAASEVEFFMY 509
           +KASPSL +FT+K     M   RP  + +    K     +K +EL  F G   ++E   Y
Sbjct: 364 IKASPSLLKFTLKLDYLDMFEQRPLRKVK----KFPHQYIKVVELAGFVGKPIDLELVQY 419

Query: 510 VLENTIGLQKITIDTRLP 563
             +N + L++I  DTR P
Sbjct: 420 FHKNAVALEEIIFDTRKP 437


>ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223550470|gb|EEF51957.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 457

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 17/244 (6%)
 Frame = +3

Query: 3   SLKLKCLEFVRCSELRNLEIFAEKLVSF------RYCGWPLDIEFKSVPSLVELAFGGLY 164
           SL+LK LE   C  L+N EI A  LV+       RY G  + ++   +P L++L  GG  
Sbjct: 221 SLRLKYLEIFDCYHLKNFEICAPNLVTILYNQGGRYNGRRMKLQAVHLPHLLDLHLGGPE 280

Query: 165 VDIVRE------SLLSQIKVLKLDIT---LNIPEVIYWLSELPKLKNLKHLEVVVSFDNN 317
           + I  +      S  SQ+  LK+ +T   +   +V     + P+L NL+HL     +D  
Sbjct: 281 LSITEDFFGACSSSFSQLMTLKIVVTEVRMQECQVRLKFPKFPELTNLRHLGFKTEYDIC 340

Query: 318 FTLDACALLLKASPSLWRFTVKMQT-TRPSLRTEWEYTKECQN-SLKELELVMFCGAASE 491
             L A  LL+K+SP L +FT+++   +R  ++        C + +LK +E+V F G A E
Sbjct: 341 SIL-AVRLLIKSSPLLNKFTLELADGSRCQIKRRVRTGINCPHQNLKVVEIVGFIGGAVE 399

Query: 492 VEFFMYVLENTIGLQKITIDTRLPTKPKLRPTGEHLRTWGHEENRNRAWRLREKIPPGIE 671
            EF M+ L+N   L+KI +  R P  P      + LR       R  A + + +  P +E
Sbjct: 400 YEFIMFFLDNASALEKIILRPRDPFSPS-EAENKMLR-----RAREHAEKFKTRFSPRVE 453

Query: 672 FVCL 683
            V +
Sbjct: 454 VVIM 457


>ref|XP_003540740.1| PREDICTED: putative F-box protein At3g58860-like [Glycine max]
          Length = 444

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 14/241 (5%)
 Frame = +3

Query: 3   SLKLKCLEFVRCSELRNLEIFAEKLVSFRYCGWPLDIEFKSVPSLVELAFGGLYVDIVRE 182
           +L+LK LE V C  + +L+I+A  LV+FRY G     +F++VPSLVE +FGG++   +  
Sbjct: 211 ALRLKHLELVEC-RIMDLDIYAVNLVTFRYQGKYGKFKFQNVPSLVEASFGGIFCSYLES 269

Query: 183 SL--------LSQIKVLKLDITLNIPEVIYWLSELPKLKNLKHLEVVVSFDNNFTLDACA 338
            +        L QI VLKL+++   P    +L  LP   N+  LE+ +   +   LD   
Sbjct: 270 DMDRVDFYGVLLQINVLKLELSKPYPG---FLEGLPVFDNVGQLEIRIPHRSGAALDHHV 326

Query: 339 LLLKASPSLWRFTVKMQTTRPSLRTE-WEYTKECQ-NSLKELELVMFCGAASEVEFFMYV 512
            LL + PS+    +K Q    S+  E W+   E +  +L+ELE+  F    S++E  + +
Sbjct: 327 SLLSSFPSVRVLKIKFQRNDLSVVEENWKANLEHEYPNLRELEVSGFRRDPSQMELLISI 386

Query: 513 LENTIGLQKITID----TRLPTKPKLRPTGEHLRTWGHEENRNRAWRLREKIPPGIEFVC 680
            E    L  + +D      +   P ++     +R    E  +  A  L+  +PP  + + 
Sbjct: 387 FEKAPNLNSVVVDPLSSIHVDRSPDVKARYREMR---RETTKWLADALKPHLPPLTQLIV 443

Query: 681 L 683
           L
Sbjct: 444 L 444


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