BLASTX nr result

ID: Glycyrrhiza24_contig00022168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022168
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601137.1| Auxin response factor [Medicago truncatula] ...   482   e-134
ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793...   350   3e-94
ref|XP_002513844.1| Auxin response factor, putative [Ricinus com...   336   7e-90
ref|XP_002307409.1| predicted protein [Populus trichocarpa] gi|2...   320   5e-85
ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Gl...   282   1e-73

>ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
            gi|355490185|gb|AES71388.1| Auxin response factor
            [Medicago truncatula]
          Length = 593

 Score =  482 bits (1241), Expect = e-134
 Identities = 238/316 (75%), Positives = 262/316 (82%), Gaps = 2/316 (0%)
 Frame = +1

Query: 1    YPKAAWSDFVVKAEVVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGPW 180
            YP+A WSDFV+KAEVVD AMSV W PGMR+KMAVE DDSSR TWFQGVVS V+VPD G W
Sbjct: 291  YPRAGWSDFVLKAEVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAW 350

Query: 181  KGSPWRMLQVTWDEPDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQG-SGDGEG 357
            +GSPWRML +TWDEP++ Q SKWVSPWQVEL+STTP+LHT FPP+KR +   G   DG+G
Sbjct: 351  RGSPWRMLHITWDEPEVLQTSKWVSPWQVELLSTTPSLHTPFPPLKRTRGVSGVLTDGDG 410

Query: 358  DPFSMTGFTNSTMGHLNQTLLSYGTFPAGMQGARHDLFSALSFTNFPGDNSRLCMGNSFG 537
            DPFS+TGFTNST G LNQ LLSY TFPAGMQGARHDLFS  SF+NFPGDN RLCMGNSFG
Sbjct: 411  DPFSITGFTNSTTGQLNQPLLSYSTFPAGMQGARHDLFSVSSFSNFPGDNFRLCMGNSFG 470

Query: 538  NNTA-RLKTLSTDLNVGSSQSGDLSPDSQSSLHSFGTEFVRNHNCNSTKPGSVSFQLFGA 714
            +NT   LK+ STDLNVGSSQSGD SP+SQSSL SFGT+FVRN+NCNS KPG ++FQLFGA
Sbjct: 471  SNTVPGLKSFSTDLNVGSSQSGDFSPESQSSLPSFGTDFVRNYNCNSMKPGPITFQLFGA 530

Query: 715  VIQAERPVESDSAVQMEQPVESGSHGTGCTGDDSSKGCNETEGIDNPLADSLTYSKLLGR 894
            VIQ             EQPVESGSHGT  TGDDSSKGCNETEGI+NPL DS TYSKLL R
Sbjct: 531  VIQT------------EQPVESGSHGTVSTGDDSSKGCNETEGINNPLEDS-TYSKLLDR 577

Query: 895  LNGQCQRASTVEACYL 942
            L+GQCQ ASTVEACYL
Sbjct: 578  LDGQCQIASTVEACYL 593


>ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  350 bits (899), Expect = 3e-94
 Identities = 182/265 (68%), Positives = 207/265 (78%), Gaps = 5/265 (1%)
 Frame = +1

Query: 1    YPKAAWSDFVVKAEVVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGPW 180
            YPK  WS+FVVK E V+EAM V WSPG+RVK+A E DDSSR++W QG VSSVA+   G W
Sbjct: 293  YPKERWSEFVVKTEAVNEAMKVAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQW 352

Query: 181  KGSPWRMLQVTWDEPDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQGSG---DG 351
            +GS WRMLQVTWDEP+  Q +KWVSPWQVELVSTTPALH+AFPP+KR KAA  SG   +G
Sbjct: 353  RGSLWRMLQVTWDEPEGLQIAKWVSPWQVELVSTTPALHSAFPPIKRIKAAHDSGVFTNG 412

Query: 352  EGDPFSMTGFTNSTMGHLNQTLLSYGTFPAGMQGARHDLFSALSFTNFPGDNSRLCMGNS 531
            E DPF MTGFTNSTMG LNQ LLSYGTFPAGMQGARHD FSA  F N+P D SRLCMGNS
Sbjct: 413  ERDPFPMTGFTNSTMGQLNQALLSYGTFPAGMQGARHDAFSASRFCNYPTDMSRLCMGNS 472

Query: 532  FGNNT-ARLKTLSTDLNVGSSQSGDLSPDSQSSLHSFGTEFVRNHNCNSTKPGSVSFQLF 708
            FG +T   LKTL T++NVGSSQS +LSPDS+ SL S GT+ V     NS K GSVSFQLF
Sbjct: 473  FGKSTFPWLKTLETEVNVGSSQSDELSPDSRGSLQSCGTDLVG----NSRKLGSVSFQLF 528

Query: 709  GAVIQAERPVESD-SAVQMEQPVES 780
            GAVIQ E+PVE+   AVQ+   +E+
Sbjct: 529  GAVIQTEQPVENGLQAVQVSNRLEA 553


>ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
            gi|223546930|gb|EEF48427.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 603

 Score =  336 bits (862), Expect = 7e-90
 Identities = 185/323 (57%), Positives = 225/323 (69%), Gaps = 9/323 (2%)
 Frame = +1

Query: 1    YPKAAW-SDFVVKAEVVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGP 177
            YP+A W SDFVV+ +VVD A++V WS GMRVKMA+E +DSSRMTWFQG ++S ++PD G 
Sbjct: 298  YPRAGWYSDFVVRTDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGL 357

Query: 178  WKGSPWRMLQVTWDEPDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQGSG---D 348
            W+GSPWRMLQV WDEP++ QN+K VSPWQVE VS +P LH AFPP K+F+  + SG   D
Sbjct: 358  WRGSPWRMLQVAWDEPEVLQNAKRVSPWQVEYVSPSPPLHGAFPPAKKFRFPENSGFLTD 417

Query: 349  GEGDP-FSMTGFTNSTMGHLNQTLLSYGTFPAGMQGARHDLFSALSFTN-FPGDNSRLCM 522
            GEG+  F M+G TNSTMG++NQ+ L+Y +FPAGMQGAR + FS    +N F  D S LC 
Sbjct: 418  GEGELFFPMSGLTNSTMGNINQS-LNYHSFPAGMQGARQNPFSVYGLSNFFSEDTSHLCS 476

Query: 523  GNSFGNN-TARLKTLSTDLNVGSSQSGDLSPDSQSSLHSFGTEFVRNHNCNSTKPGSVSF 699
             N FGN    +LKT+ST+LN+GSS S +LSPDSQSS+HS  TE V N  CNSTK G  SF
Sbjct: 477  DNVFGNKMVPKLKTVSTELNIGSSPSENLSPDSQSSIHSCDTELVGNPGCNSTKAGISSF 536

Query: 700  QLFGAVIQAERPVESDSAVQMEQPVESGSHGTGCTGDDSSKGCNETEGIDNPLADSLT-- 873
            QLFG +I             M QPVESG    G   D  SK  NE    DNPL  +LT  
Sbjct: 537  QLFGKII------------HMSQPVESGFEDAGYVEDYVSKRYNE----DNPLDLALTSS 580

Query: 874  YSKLLGRLNGQCQRASTVEACYL 942
            Y++LL R++ QCQRAS VEAC L
Sbjct: 581  YTELLSRIDVQCQRASAVEACSL 603


>ref|XP_002307409.1| predicted protein [Populus trichocarpa] gi|222856858|gb|EEE94405.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  320 bits (820), Expect = 5e-85
 Identities = 171/319 (53%), Positives = 218/319 (68%), Gaps = 7/319 (2%)
 Frame = +1

Query: 1   YPKAAW-SDFVVKAEVVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGP 177
           YP+A W SDFVV+AE V+ A+ V W+ GMRVKMA+E +DSSRMTWFQG VS   +PD G 
Sbjct: 30  YPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTGLPDSGA 89

Query: 178 WKGSPWRMLQVTWDEPDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQGS---GD 348
           W+GSPWRMLQ+TWDEP++ QN+K VSPWQVE V+TTP L  AFPPMK+ +    S    D
Sbjct: 90  WRGSPWRMLQITWDEPEVLQNAKRVSPWQVEFVATTPQLQAAFPPMKKLRYPNDSRFLTD 149

Query: 349 GEGDPFSMTGFTNSTMGHLNQTLLSYGTFPAGMQGARHDLFSALSFTNFPGDNS-RLCMG 525
           GE   F M+  TNSTMGH N ++L+Y TFPAGMQGAR D FS    +NF  +N+ ++   
Sbjct: 150 GELF-FPMSDLTNSTMGHTNASMLNYSTFPAGMQGARQDPFSTFGLSNFISENAPQVFSD 208

Query: 526 NSFGNN-TARLKTLSTDLNVGSSQSGDLSPDSQSSLHSFGTEFVRNHNCNSTKPGSVSFQ 702
            +FGNN   ++K + +++N+GS QS +LSP+SQSS +SFG  FV N   N  K G  S Q
Sbjct: 209 RAFGNNLVPKMKRMPSEMNIGSLQSENLSPESQSSAYSFGIGFVGNRGFNPKKVGINSIQ 268

Query: 703 LFGAVIQAERPVESDSAVQMEQPVESGSHGTGCTGDDSSKGCNETEGIDN-PLADSLTYS 879
           LFG +I             M+QPVE+G    G   DDSSK CNETEG+D   L+ + +Y+
Sbjct: 269 LFGKII------------HMDQPVENGFDDVGFM-DDSSKCCNETEGVDALELSLTSSYT 315

Query: 880 KLLGRLNGQCQRASTVEAC 936
           +LL R++ QCQRAS VEAC
Sbjct: 316 ELLNRIDAQCQRASPVEAC 334


>ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 551

 Score =  282 bits (722), Expect = 1e-73
 Identities = 158/300 (52%), Positives = 194/300 (64%), Gaps = 17/300 (5%)
 Frame = +1

Query: 1    YPKAAWSDFVVKAEVVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGPW 180
            YP+  ++DFVV AEVV+E+M   W  GMRVK+++E +DSSRMTW+QG VSS    + GPW
Sbjct: 267  YPRTGFADFVVSAEVVEESMKCAWVGGMRVKISMETEDSSRMTWYQGTVSSACASENGPW 326

Query: 181  KGSPWRMLQVTWDEPDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQGSG---DG 351
                 RMLQV WDEP++ QN+K VSPWQVELVS   ALHT F P KR +A QGSG   + 
Sbjct: 327  -----RMLQVNWDEPEVLQNAKQVSPWQVELVSPPFALHTVFSPNKRLRADQGSGLLSNR 381

Query: 352  EGDPF------------SMTGFTNSTMGHLNQTLLSYGTFPAGMQGARHDLFSALSFTNF 495
            E DPF             MTGF NST+G +++ LLSY +FPAGMQGARHDL+S LSF+NF
Sbjct: 382  EQDPFFPMPGFSNSAMGHMTGFPNSTVGQMDKPLLSYESFPAGMQGARHDLYSPLSFSNF 441

Query: 496  PGDNSRLCMGN-SFGNNTAR-LKTLSTDLNVGSSQSGDLSPDSQSSLHSFGTEFVRNHNC 669
              DNS L MG+ SFGNN  + L T++T+LN+ SSQS DLSP SQSS HSFGTEF    NC
Sbjct: 442  LNDNSYLYMGSGSFGNNPVQSLGTVTTELNMSSSQSDDLSPHSQSSFHSFGTEFTGTRNC 501

Query: 670  NSTKPGSVSFQLFGAVIQAERPVESDSAVQMEQPVESGSHGTGCTGDDSSKGCNETEGID 849
            + TK G  S  LFG +I               QP ES  H   C   D S+G N+ + ++
Sbjct: 502  D-TKVGPGSILLFGKII---------------QPAESDLHDADCMERDGSRGSNKLKTVE 545


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