BLASTX nr result

ID: Glycyrrhiza24_contig00022118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022118
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [...   266   4e-69
gb|AFK47408.1| unknown [Medicago truncatula]                          262   5e-68
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul...   262   5e-68
gb|ACU18651.1| unknown [Glycine max]                                  256   4e-66
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   212   6e-53

>ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [Glycine max]
          Length = 381

 Score =  266 bits (680), Expect = 4e-69
 Identities = 124/152 (81%), Positives = 130/152 (85%)
 Frame = -2

Query: 765 TAEVRDSVKGKTASTKFTQISSNGTHSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYIS 586
           TAEVR S KGK ASTKFT+IS+NGT SIVLCEPITGRTHQIRVHLQYSGHPIANDMLYIS
Sbjct: 229 TAEVRGSAKGKAASTKFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYIS 288

Query: 585 EQTVDRSIKGXXXXXXXXXXXXSLTSNFADEVPNECQENSNGDFTFDPMCTNCPNLAPKG 406
           EQTVDRS+KG            SLTSNF ++V NEC+ENSNGDF  DPMCTNCPNLAPKG
Sbjct: 289 EQTVDRSVKGLSADRSARISGVSLTSNFNEKVLNECEENSNGDFGIDPMCTNCPNLAPKG 348

Query: 405 YDGDEEGLWLHCFRYSGPGWTYECPYPDWAKL 310
           YD DEEGLWLHC RYSGPGWTYECPYPDWAKL
Sbjct: 349 YDSDEEGLWLHCIRYSGPGWTYECPYPDWAKL 380


>gb|AFK47408.1| unknown [Medicago truncatula]
          Length = 268

 Score =  262 bits (670), Expect = 5e-68
 Identities = 123/152 (80%), Positives = 128/152 (84%)
 Frame = -2

Query: 765 TAEVRDSVKGKTASTKFTQISSNGTHSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYIS 586
           TAEVRDS KGK ASTKFT+ISSNGTHSIVLCEP+TGRTHQIRVHLQ SGHPIANDMLYIS
Sbjct: 117 TAEVRDSTKGKVASTKFTRISSNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYIS 176

Query: 585 EQTVDRSIKGXXXXXXXXXXXXSLTSNFADEVPNECQENSNGDFTFDPMCTNCPNLAPKG 406
           EQTVDRSI G            SLTSNF ++VP + QENSN DF  DPMCTNCPNLAPKG
Sbjct: 177 EQTVDRSINGSTADRSACISDASLTSNFGEKVPKDYQENSNEDFRIDPMCTNCPNLAPKG 236

Query: 405 YDGDEEGLWLHCFRYSGPGWTYECPYPDWAKL 310
           YD DEEGLWLHC RYSGPGWTYECPYPDWAKL
Sbjct: 237 YDTDEEGLWLHCMRYSGPGWTYECPYPDWAKL 268


>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355491829|gb|AES73032.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 380

 Score =  262 bits (670), Expect = 5e-68
 Identities = 123/152 (80%), Positives = 128/152 (84%)
 Frame = -2

Query: 765 TAEVRDSVKGKTASTKFTQISSNGTHSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYIS 586
           TAEVRDS KGK ASTKFT+ISSNGTHSIVLCEP+TGRTHQIRVHLQ SGHPIANDMLYIS
Sbjct: 229 TAEVRDSTKGKVASTKFTRISSNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYIS 288

Query: 585 EQTVDRSIKGXXXXXXXXXXXXSLTSNFADEVPNECQENSNGDFTFDPMCTNCPNLAPKG 406
           EQTVDRSI G            SLTSNF ++VP + QENSN DF  DPMCTNCPNLAPKG
Sbjct: 289 EQTVDRSINGSTADRSACISDASLTSNFGEKVPKDYQENSNEDFRIDPMCTNCPNLAPKG 348

Query: 405 YDGDEEGLWLHCFRYSGPGWTYECPYPDWAKL 310
           YD DEEGLWLHC RYSGPGWTYECPYPDWAKL
Sbjct: 349 YDTDEEGLWLHCMRYSGPGWTYECPYPDWAKL 380


>gb|ACU18651.1| unknown [Glycine max]
          Length = 160

 Score =  256 bits (654), Expect = 4e-66
 Identities = 118/144 (81%), Positives = 124/144 (86%)
 Frame = -2

Query: 741 KGKTASTKFTQISSNGTHSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSI 562
           KGK ASTKFT+IS+NGT SIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRS+
Sbjct: 16  KGKAASTKFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSV 75

Query: 561 KGXXXXXXXXXXXXSLTSNFADEVPNECQENSNGDFTFDPMCTNCPNLAPKGYDGDEEGL 382
           KG            SLTSNF ++V NEC+ENSNGDF  DPMCTNCPNLAPKGYD DEEGL
Sbjct: 76  KGLSADRSARISGVSLTSNFNEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEEGL 135

Query: 381 WLHCFRYSGPGWTYECPYPDWAKL 310
           WLHC RYSGPGWTYECPYPDWAKL
Sbjct: 136 WLHCIRYSGPGWTYECPYPDWAKL 159


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis
           vinifera] gi|359491114|ref|XP_002280549.2| PREDICTED:
           RNA pseudourine synthase 7-like isoform 1 [Vitis
           vinifera]
          Length = 386

 Score =  212 bits (540), Expect = 6e-53
 Identities = 99/147 (67%), Positives = 112/147 (76%), Gaps = 1/147 (0%)
 Frame = -2

Query: 744 VKGKTASTKFTQISSNGTHSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRS 565
           +KGK+A TKFT+IS+NGTHSIVLCEPITGRTHQIRVHLQY+GHPIANDMLY+SE +VDRS
Sbjct: 240 LKGKSACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRS 299

Query: 564 IKGXXXXXXXXXXXXSLTSNFADEVPNE-CQENSNGDFTFDPMCTNCPNLAPKGYDGDEE 388
            KG            SL S+      +E C +NS  DF+ DPMCTNCPNL PKGYD DEE
Sbjct: 300 TKGLSADRAAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEE 359

Query: 387 GLWLHCFRYSGPGWTYECPYPDWAKLD 307
           GLWLHC RY GP W YECP+P+WA  D
Sbjct: 360 GLWLHCIRYCGPDWVYECPHPEWASHD 386


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