BLASTX nr result
ID: Glycyrrhiza24_contig00022101
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00022101 (379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding... 180 1e-43 ref|XP_002326828.1| chromatin remodeling complex subunit [Populu... 130 1e-28 ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding... 129 2e-28 ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223... 124 6e-27 ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 119 2e-25 >ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine max] Length = 1482 Score = 180 bits (456), Expect = 1e-43 Identities = 90/125 (72%), Positives = 96/125 (76%) Frame = +3 Query: 3 KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182 KFEEVSKSSCDSI D+RSRRN+DEEKSL +GY SLNVKD IS Sbjct: 1239 KFEEVSKSSCDSITDLRSRRNVDEEKSLKIESARKKAEEKKLARWEALGYQSLNVKDAIS 1298 Query: 183 PPDGDIISATGSVHFVYGDCTAPSNGSSSEPAIIFSCVDTSGHWGHGGMFDALAKLSTSI 362 P DI SA+GSVHFVYGDCTAPSN SSEPAIIFSCVDTSGHWGHGGMFDAL+KLSTSI Sbjct: 1299 PTGNDIASASGSVHFVYGDCTAPSNVCSSEPAIIFSCVDTSGHWGHGGMFDALSKLSTSI 1358 Query: 363 SDAYE 377 DAY+ Sbjct: 1359 GDAYQ 1363 >ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835143|gb|EEE73578.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 866 Score = 130 bits (326), Expect = 1e-28 Identities = 65/125 (52%), Positives = 84/125 (67%) Frame = +3 Query: 3 KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182 KF+E S+S+ + ++D+ +RRNL + K L +GY+SL+V DPI Sbjct: 629 KFKETSQSNENLVMDLGNRRNLPDNKYLNLEAAKKKAEEKKLSKWEALGYHSLSVGDPIY 688 Query: 183 PPDGDIISATGSVHFVYGDCTAPSNGSSSEPAIIFSCVDTSGHWGHGGMFDALAKLSTSI 362 P DGD +S +G VHFV GDCT P SSEP++IFSCVD SG+WGHGGMFDALAKLS+SI Sbjct: 689 PVDGDALSDSGFVHFVVGDCTHPDKLCSSEPSVIFSCVDESGNWGHGGMFDALAKLSSSI 748 Query: 363 SDAYE 377 AY+ Sbjct: 749 PAAYQ 753 >ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis vinifera] Length = 876 Score = 129 bits (324), Expect = 2e-28 Identities = 68/125 (54%), Positives = 81/125 (64%) Frame = +3 Query: 3 KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182 KF+E S+SS D I+ + +RR L EEK L GYNSL+VKDP S Sbjct: 635 KFKEASQSSDDPIIQVGNRRKLPEEKLLKLEAARKKAEEEKLAKWEAHGYNSLSVKDPPS 694 Query: 183 PPDGDIISATGSVHFVYGDCTAPSNGSSSEPAIIFSCVDTSGHWGHGGMFDALAKLSTSI 362 D D+IS +GSV FVYGDCT PS SE IIFSC+D SG WGHGGMFDALA+LS+S+ Sbjct: 695 HVDVDMISDSGSVDFVYGDCTLPSKVCPSEATIIFSCIDDSGIWGHGGMFDALARLSSSV 754 Query: 363 SDAYE 377 DAY+ Sbjct: 755 PDAYQ 759 >ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1| helicase, putative [Ricinus communis] Length = 860 Score = 124 bits (312), Expect = 6e-27 Identities = 61/125 (48%), Positives = 84/125 (67%) Frame = +3 Query: 3 KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182 +F+E S+SS + ++D+ RR+L E+K L +GY+SL+VKDP Sbjct: 624 RFKEASQSSGNMVLDLGHRRSLPEDKHLKLEAAKKKAEEKKLNKWESLGYHSLSVKDP-E 682 Query: 183 PPDGDIISATGSVHFVYGDCTAPSNGSSSEPAIIFSCVDTSGHWGHGGMFDALAKLSTSI 362 DGD++S +G +HFV GDCT P+ SEP +IFSCVD SG+WGHGGMF+ALAKLS+S+ Sbjct: 683 AVDGDVLSESGFLHFVVGDCTEPAKVCPSEPTVIFSCVDNSGNWGHGGMFNALAKLSSSV 742 Query: 363 SDAYE 377 +AYE Sbjct: 743 PNAYE 747 >ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like [Cucumis sativus] Length = 867 Score = 119 bits (299), Expect = 2e-25 Identities = 64/127 (50%), Positives = 80/127 (62%), Gaps = 2/127 (1%) Frame = +3 Query: 3 KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182 KF+E + + + I ++ R+ L +KSL +GY+SL+V+DPI Sbjct: 622 KFKEATPGA-NQIKELEDRKTLSRDKSLKLQAAKKKAEEKKLSKWEALGYHSLSVEDPIL 680 Query: 183 PPDGDIISATGSVHFVYGDCTAPSNGSS--SEPAIIFSCVDTSGHWGHGGMFDALAKLST 356 P DGD+IS GSV+FVYGDCT PS + SEP IIFSCVD SG WGHGGMF ALAKLS Sbjct: 681 PNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFSCVDDSGSWGHGGMFGALAKLSE 740 Query: 357 SISDAYE 377 S+ AYE Sbjct: 741 SVPSAYE 747