BLASTX nr result

ID: Glycyrrhiza24_contig00022101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022101
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...   180   1e-43
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   130   1e-28
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   129   2e-28
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   124   6e-27
ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   119   2e-25

>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
            max]
          Length = 1482

 Score =  180 bits (456), Expect = 1e-43
 Identities = 90/125 (72%), Positives = 96/125 (76%)
 Frame = +3

Query: 3    KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182
            KFEEVSKSSCDSI D+RSRRN+DEEKSL                   +GY SLNVKD IS
Sbjct: 1239 KFEEVSKSSCDSITDLRSRRNVDEEKSLKIESARKKAEEKKLARWEALGYQSLNVKDAIS 1298

Query: 183  PPDGDIISATGSVHFVYGDCTAPSNGSSSEPAIIFSCVDTSGHWGHGGMFDALAKLSTSI 362
            P   DI SA+GSVHFVYGDCTAPSN  SSEPAIIFSCVDTSGHWGHGGMFDAL+KLSTSI
Sbjct: 1299 PTGNDIASASGSVHFVYGDCTAPSNVCSSEPAIIFSCVDTSGHWGHGGMFDALSKLSTSI 1358

Query: 363  SDAYE 377
             DAY+
Sbjct: 1359 GDAYQ 1363


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222835143|gb|EEE73578.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 866

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/125 (52%), Positives = 84/125 (67%)
 Frame = +3

Query: 3    KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182
            KF+E S+S+ + ++D+ +RRNL + K L                   +GY+SL+V DPI 
Sbjct: 629  KFKETSQSNENLVMDLGNRRNLPDNKYLNLEAAKKKAEEKKLSKWEALGYHSLSVGDPIY 688

Query: 183  PPDGDIISATGSVHFVYGDCTAPSNGSSSEPAIIFSCVDTSGHWGHGGMFDALAKLSTSI 362
            P DGD +S +G VHFV GDCT P    SSEP++IFSCVD SG+WGHGGMFDALAKLS+SI
Sbjct: 689  PVDGDALSDSGFVHFVVGDCTHPDKLCSSEPSVIFSCVDESGNWGHGGMFDALAKLSSSI 748

Query: 363  SDAYE 377
              AY+
Sbjct: 749  PAAYQ 753


>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
            vinifera]
          Length = 876

 Score =  129 bits (324), Expect = 2e-28
 Identities = 68/125 (54%), Positives = 81/125 (64%)
 Frame = +3

Query: 3    KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182
            KF+E S+SS D I+ + +RR L EEK L                    GYNSL+VKDP S
Sbjct: 635  KFKEASQSSDDPIIQVGNRRKLPEEKLLKLEAARKKAEEEKLAKWEAHGYNSLSVKDPPS 694

Query: 183  PPDGDIISATGSVHFVYGDCTAPSNGSSSEPAIIFSCVDTSGHWGHGGMFDALAKLSTSI 362
              D D+IS +GSV FVYGDCT PS    SE  IIFSC+D SG WGHGGMFDALA+LS+S+
Sbjct: 695  HVDVDMISDSGSVDFVYGDCTLPSKVCPSEATIIFSCIDDSGIWGHGGMFDALARLSSSV 754

Query: 363  SDAYE 377
             DAY+
Sbjct: 755  PDAYQ 759


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
           helicase, putative [Ricinus communis]
          Length = 860

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/125 (48%), Positives = 84/125 (67%)
 Frame = +3

Query: 3   KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182
           +F+E S+SS + ++D+  RR+L E+K L                   +GY+SL+VKDP  
Sbjct: 624 RFKEASQSSGNMVLDLGHRRSLPEDKHLKLEAAKKKAEEKKLNKWESLGYHSLSVKDP-E 682

Query: 183 PPDGDIISATGSVHFVYGDCTAPSNGSSSEPAIIFSCVDTSGHWGHGGMFDALAKLSTSI 362
             DGD++S +G +HFV GDCT P+    SEP +IFSCVD SG+WGHGGMF+ALAKLS+S+
Sbjct: 683 AVDGDVLSESGFLHFVVGDCTEPAKVCPSEPTVIFSCVDNSGNWGHGGMFNALAKLSSSV 742

Query: 363 SDAYE 377
            +AYE
Sbjct: 743 PNAYE 747


>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 1-like [Cucumis sativus]
          Length = 867

 Score =  119 bits (299), Expect = 2e-25
 Identities = 64/127 (50%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   KFEEVSKSSCDSIVDMRSRRNLDEEKSLXXXXXXXXXXXXXXXXXXXVGYNSLNVKDPIS 182
           KF+E +  + + I ++  R+ L  +KSL                   +GY+SL+V+DPI 
Sbjct: 622 KFKEATPGA-NQIKELEDRKTLSRDKSLKLQAAKKKAEEKKLSKWEALGYHSLSVEDPIL 680

Query: 183 PPDGDIISATGSVHFVYGDCTAPSNGSS--SEPAIIFSCVDTSGHWGHGGMFDALAKLST 356
           P DGD+IS  GSV+FVYGDCT PS   +  SEP IIFSCVD SG WGHGGMF ALAKLS 
Sbjct: 681 PNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFSCVDDSGSWGHGGMFGALAKLSE 740

Query: 357 SISDAYE 377
           S+  AYE
Sbjct: 741 SVPSAYE 747


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