BLASTX nr result

ID: Glycyrrhiza24_contig00022083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022083
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622989.1| General transcription factor 3C polypeptide ...   214   1e-53
ref|XP_003622988.1| General transcription factor 3C polypeptide ...   214   1e-53
ref|XP_003537671.1| PREDICTED: general transcription factor 3C p...   207   2e-51
ref|XP_004142476.1| PREDICTED: general transcription factor 3C p...   131   8e-29
ref|XP_004159095.1| PREDICTED: LOW QUALITY PROTEIN: general tran...   120   2e-25

>ref|XP_003622989.1| General transcription factor 3C polypeptide [Medicago truncatula]
           gi|355498004|gb|AES79207.1| General transcription factor
           3C polypeptide [Medicago truncatula]
          Length = 509

 Score =  214 bits (545), Expect = 1e-53
 Identities = 109/168 (64%), Positives = 123/168 (73%), Gaps = 8/168 (4%)
 Frame = +3

Query: 3   PMQATCTFESGWFSHQKINCFRQRLMVRYLAIFPKPGAENLLKAATSKFEKLKRECSRNA 182
           PMQ TCTFESGWFS  KINC RQRLMVRYL+IFPKPGAE+LL+ A SKFEKLKREC+R A
Sbjct: 332 PMQDTCTFESGWFSLNKINCLRQRLMVRYLSIFPKPGAESLLRVAASKFEKLKRECNREA 391

Query: 183 TKLDGEECQQANSGLEENEEPDNAVDDEEETXXXXXXXXXXXXXXXXXGDSEMPLPSPSY 362
            KL  EE QQAN+GLEE+EEP+N  DD+ E                  GD+EMPLPSPS 
Sbjct: 392 VKLCVEERQQANTGLEESEEPENVEDDDGEAAEANNSDEESEEELDLTGDTEMPLPSPSR 451

Query: 363 H--------NMENISRAHLQELFGSFPSNEIDGDKAQENGSDQEYHIY 482
           +        +  NIS  HLQELFGSFPS+EIDGDKAQENGS++EYHIY
Sbjct: 452 YRTRHSTCLSYPNISMTHLQELFGSFPSDEIDGDKAQENGSEEEYHIY 499


>ref|XP_003622988.1| General transcription factor 3C polypeptide [Medicago truncatula]
           gi|355498003|gb|AES79206.1| General transcription factor
           3C polypeptide [Medicago truncatula]
          Length = 612

 Score =  214 bits (545), Expect = 1e-53
 Identities = 109/168 (64%), Positives = 123/168 (73%), Gaps = 8/168 (4%)
 Frame = +3

Query: 3   PMQATCTFESGWFSHQKINCFRQRLMVRYLAIFPKPGAENLLKAATSKFEKLKRECSRNA 182
           PMQ TCTFESGWFS  KINC RQRLMVRYL+IFPKPGAE+LL+ A SKFEKLKREC+R A
Sbjct: 435 PMQDTCTFESGWFSLNKINCLRQRLMVRYLSIFPKPGAESLLRVAASKFEKLKRECNREA 494

Query: 183 TKLDGEECQQANSGLEENEEPDNAVDDEEETXXXXXXXXXXXXXXXXXGDSEMPLPSPSY 362
            KL  EE QQAN+GLEE+EEP+N  DD+ E                  GD+EMPLPSPS 
Sbjct: 495 VKLCVEERQQANTGLEESEEPENVEDDDGEAAEANNSDEESEEELDLTGDTEMPLPSPSR 554

Query: 363 H--------NMENISRAHLQELFGSFPSNEIDGDKAQENGSDQEYHIY 482
           +        +  NIS  HLQELFGSFPS+EIDGDKAQENGS++EYHIY
Sbjct: 555 YRTRHSTCLSYPNISMTHLQELFGSFPSDEIDGDKAQENGSEEEYHIY 602


>ref|XP_003537671.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Glycine max]
          Length = 547

 Score =  207 bits (526), Expect = 2e-51
 Identities = 103/160 (64%), Positives = 116/160 (72%)
 Frame = +3

Query: 3   PMQATCTFESGWFSHQKINCFRQRLMVRYLAIFPKPGAENLLKAATSKFEKLKRECSRNA 182
           P + TCT  +GWFS   INC RQRLMVRYL++FPKPGAENLL+AAT KFEKLKREC R+A
Sbjct: 378 PFRPTCTSGTGWFSQHMINCIRQRLMVRYLSVFPKPGAENLLRAATLKFEKLKRECYRHA 437

Query: 183 TKLDGEECQQANSGLEENEEPDNAVDDEEETXXXXXXXXXXXXXXXXXGDSEMPLPSPSY 362
            KLDGEECQQAN GLEENEE DN  +DEEE                  GD+EMPLPS SY
Sbjct: 438 MKLDGEECQQANLGLEENEELDNG-EDEEEAAEGNDSDEEWEEEHDLAGDNEMPLPSDSY 496

Query: 363 HNMENISRAHLQELFGSFPSNEIDGDKAQENGSDQEYHIY 482
            N EN+SR HLQ+LF +FP NEID D  Q NGS++EY IY
Sbjct: 497 INFENLSRTHLQDLFVNFPPNEIDCDNVQANGSEEEYQIY 536


>ref|XP_004142476.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Cucumis sativus]
          Length = 556

 Score =  131 bits (330), Expect = 8e-29
 Identities = 71/165 (43%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
 Frame = +3

Query: 9   QATCTFESGWFSHQKINCFRQRLMVRYLAIFPKPGAENLLKAATSKFEKLKRECSRNATK 188
           +A C++ESGWFS + +NC RQR+M+R+L++FP  GAE LL AA+  FEKLKR   ++ +K
Sbjct: 379 EALCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLTAASESFEKLKRGDRKDCSK 438

Query: 189 LDGEECQQANSGLEENEEPDNAVDDEEE-----TXXXXXXXXXXXXXXXXXGDSEMPLPS 353
           +D EE  +AN+    +++ D +  +E+E                        D E  L S
Sbjct: 439 VDQEEEHEANAVANHDDKLDASYAEEDEEDGIGVESGNEALDAYDDFNMVGDDDEFSLHS 498

Query: 354 PSYHNMENISRAHLQELFGSFPSNEIDGDKAQE--NGSDQEYHIY 482
            SY  ME++SR HLQELFGSFPS + DG+K  +  +GSD+EY IY
Sbjct: 499 HSYLGMEDVSRTHLQELFGSFPSLDEDGEKMMDDGDGSDEEYQIY 543


>ref|XP_004159095.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
           polypeptide 5-like [Cucumis sativus]
          Length = 592

 Score =  120 bits (301), Expect = 2e-25
 Identities = 70/173 (40%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
 Frame = +3

Query: 9   QATCTFESGWFSHQKINCFRQRLMVRYLAIFPKPGAENLLKAATSKFEKLKRECSRNATK 188
           +A C++ESGWFS + +NC RQR+M+R+L++FP  GAE LL AA+  FEKLKR   + A +
Sbjct: 407 EALCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLTAASESFEKLKRGIEKTAQR 466

Query: 189 LDG-------EECQQANSGLEENE---EPDNAVDDEEE---TXXXXXXXXXXXXXXXXXG 329
           L         +E     +G+  ++   +   A +DEE+                      
Sbjct: 467 LTRKRNMKRMQEYSMIGTGIANHDDKLDASYAEEDEEDGIGVESGNEALDAYDDFNMVGD 526

Query: 330 DSEMPLPSPSYHNMENISRAHLQELFGSFPSNEIDGDKAQE--NGSDQEYHIY 482
           D E  L S SY  ME++SR HLQELFGSFPS + DG+K  +  +GSD+EY IY
Sbjct: 527 DDEFSLHSHSYLGMEDVSRTHLQELFGSFPSLDEDGEKMMDDGDGSDEEYQIY 579


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