BLASTX nr result

ID: Glycyrrhiza24_contig00022078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022078
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527638.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   142   3e-32
ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [C...   115   5e-24
ref|XP_002306978.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   114   1e-23
emb|CBI40723.3| unnamed protein product [Vitis vinifera]              114   1e-23

>ref|XP_003527638.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 585

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/104 (65%), Positives = 77/104 (74%)
 Frame = -1

Query: 337 ENFILYDNGSDDDLNGVMEELREEGYNISTLLWIWPKTQEAGFSHSILYSKSNGLCTWTM 158
           ENFILYDN SDDDL  V++ELR++GYNISTL WIWPKTQEAGFSHS++YSKS  LC+W M
Sbjct: 322 ENFILYDNASDDDLYAVIDELRKQGYNISTLFWIWPKTQEAGFSHSVVYSKSKELCSWIM 381

Query: 157 YVDVDEFVYSPSWGSGNENDHAFKHEHGQKHEQFPSLKSMLLRE 26
           YVDVDEFV+SPSWG   EN               PSLK +L RE
Sbjct: 382 YVDVDEFVFSPSWGHETENSVV-----------VPSLKKLLARE 414


>ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [Cucumis sativus]
           gi|449489430|ref|XP_004158309.1| PREDICTED: UPF0392
           protein At1g27200-like [Cucumis sativus]
          Length = 577

 Score =  115 bits (287), Expect = 5e-24
 Identities = 48/73 (65%), Positives = 62/73 (84%)
 Frame = -1

Query: 337 ENFILYDNGSDDDLNGVMEELREEGYNISTLLWIWPKTQEAGFSHSILYSKSNGLCTWTM 158
           E FILYDNGS+D+++ V++EL++EGYNI  + WIWPKTQEAGFSHS+ YSK +  C W M
Sbjct: 324 EKFILYDNGSEDEISAVLKELKQEGYNIEIVFWIWPKTQEAGFSHSVEYSKKS--CKWMM 381

Query: 157 YVDVDEFVYSPSW 119
           +VD+DEFV+SPSW
Sbjct: 382 FVDIDEFVFSPSW 394


>ref|XP_002306978.1| predicted protein [Populus trichocarpa] gi|222856427|gb|EEE93974.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  115 bits (287), Expect = 5e-24
 Identities = 50/73 (68%), Positives = 60/73 (82%)
 Frame = -1

Query: 337 ENFILYDNGSDDDLNGVMEELREEGYNISTLLWIWPKTQEAGFSHSILYSKSNGLCTWTM 158
           E F+LYDN SDDDL  V++EL +EGYNI T  WIWPKTQEAGFSH+ LY+K +  CTW M
Sbjct: 27  EKFVLYDNDSDDDLMKVIKELNQEGYNIETFFWIWPKTQEAGFSHASLYAKDS--CTWMM 84

Query: 157 YVDVDEFVYSPSW 119
           Y+DVDEFV++PSW
Sbjct: 85  YLDVDEFVFAPSW 97


>ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 595

 Score =  114 bits (284), Expect = 1e-23
 Identities = 48/73 (65%), Positives = 60/73 (82%)
 Frame = -1

Query: 337 ENFILYDNGSDDDLNGVMEELREEGYNISTLLWIWPKTQEAGFSHSILYSKSNGLCTWTM 158
           E FILYDNGSDD+L  ++EEL ++G+N+ T+LW WPKTQEAGFSHS +Y+K    C W M
Sbjct: 342 EKFILYDNGSDDELQTIVEELNQDGFNVKTVLWPWPKTQEAGFSHSAIYAKDT--CKWMM 399

Query: 157 YVDVDEFVYSPSW 119
           YVDVDEFV+SP+W
Sbjct: 400 YVDVDEFVFSPTW 412


>emb|CBI40723.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  114 bits (284), Expect = 1e-23
 Identities = 48/73 (65%), Positives = 60/73 (82%)
 Frame = -1

Query: 337 ENFILYDNGSDDDLNGVMEELREEGYNISTLLWIWPKTQEAGFSHSILYSKSNGLCTWTM 158
           E FILYDNGSDD+L  ++EEL ++G+N+ T+LW WPKTQEAGFSHS +Y+K    C W M
Sbjct: 312 EKFILYDNGSDDELQTIVEELNQDGFNVKTVLWPWPKTQEAGFSHSAIYAKDT--CKWMM 369

Query: 157 YVDVDEFVYSPSW 119
           YVDVDEFV+SP+W
Sbjct: 370 YVDVDEFVFSPTW 382


Top