BLASTX nr result

ID: Glycyrrhiza24_contig00022053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022053
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein lig...    70   1e-10
gb|AFK46714.1| unknown [Lotus japonicus]                               69   5e-10
ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002884323.1| regulator of chromosome condensation family ...    62   5e-08
ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...    62   6e-08

>ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = +1

Query: 157 IDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 261
           +DS+S IIAWGSGEDGQLGIGSNEEKEWVCLVKAL
Sbjct: 1   MDSHSHIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 35


>gb|AFK46714.1| unknown [Lotus japonicus]
          Length = 198

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +1

Query: 157 IDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKALPS 267
           +DSNS IIAWGSGEDGQLGIG+NE+KEWVC+V+AL S
Sbjct: 1   MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCVVQALAS 37


>ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|222870779|gb|EEF07910.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +1

Query: 163 SNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 261
           + SS+IAWGSGEDGQLGIG+NEEKEWVC+VKAL
Sbjct: 3   TESSVIAWGSGEDGQLGIGNNEEKEWVCIVKAL 35


>ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330163|gb|EFH60582.1|
           regulator of chromosome condensation family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 163 SNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 261
           S +SIIAWGSGEDGQLGIG+NEEKEW C+V+AL
Sbjct: 3   SATSIIAWGSGEDGQLGIGTNEEKEWACVVEAL 35


>ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +1

Query: 163 SNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKALPS 267
           + ++IIAWGSGEDGQLG+G+NEE+EWVC +KAL S
Sbjct: 3   AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALES 37


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