BLASTX nr result
ID: Glycyrrhiza24_contig00022053
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00022053 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein lig... 70 1e-10 gb|AFK46714.1| unknown [Lotus japonicus] 69 5e-10 ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_002884323.1| regulator of chromosome condensation family ... 62 5e-08 ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ... 62 6e-08 >ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] Length = 395 Score = 70.5 bits (171), Expect = 1e-10 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +1 Query: 157 IDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 261 +DS+S IIAWGSGEDGQLGIGSNEEKEWVCLVKAL Sbjct: 1 MDSHSHIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 35 >gb|AFK46714.1| unknown [Lotus japonicus] Length = 198 Score = 68.6 bits (166), Expect = 5e-10 Identities = 30/37 (81%), Positives = 35/37 (94%) Frame = +1 Query: 157 IDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKALPS 267 +DSNS IIAWGSGEDGQLGIG+NE+KEWVC+V+AL S Sbjct: 1 MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCVVQALAS 37 >ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa] Length = 392 Score = 65.9 bits (159), Expect = 3e-09 Identities = 28/33 (84%), Positives = 32/33 (96%) Frame = +1 Query: 163 SNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 261 + SS+IAWGSGEDGQLGIG+NEEKEWVC+VKAL Sbjct: 3 TESSVIAWGSGEDGQLGIGNNEEKEWVCIVKAL 35 >ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis lyrata subsp. lyrata] gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis lyrata subsp. lyrata] Length = 393 Score = 62.0 bits (149), Expect = 5e-08 Identities = 27/33 (81%), Positives = 31/33 (93%) Frame = +1 Query: 163 SNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 261 S +SIIAWGSGEDGQLGIG+NEEKEW C+V+AL Sbjct: 3 SATSIIAWGSGEDGQLGIGTNEEKEWACVVEAL 35 >ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis sativus] Length = 390 Score = 61.6 bits (148), Expect = 6e-08 Identities = 25/35 (71%), Positives = 32/35 (91%) Frame = +1 Query: 163 SNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKALPS 267 + ++IIAWGSGEDGQLG+G+NEE+EWVC +KAL S Sbjct: 3 AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALES 37