BLASTX nr result

ID: Glycyrrhiza24_contig00022020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022020
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   146   2e-33
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   145   3e-33
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   127   1e-27
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    93   2e-17
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...    84   1e-15

>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/97 (71%), Positives = 81/97 (83%)
 Frame = +3

Query: 135 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECADATSSEKEFDMNMEAQYESDGE 314
           MAFF++F +D VS GV+EDK QGQNA+R+  SVGN+C DATSSEKEFDMNMEAQYESDGE
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYESDGE 60

Query: 315 PDGASRQQKEATADDQDDTRESNVETTSRKASAVGRW 425
           PDG+SR Q EATADD D  +ESN++TT  K + VGRW
Sbjct: 61  PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRW 97


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score =  145 bits (366), Expect = 3e-33
 Identities = 68/97 (70%), Positives = 81/97 (83%)
 Frame = +3

Query: 135 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECADATSSEKEFDMNMEAQYESDGE 314
           MAFF++F +D VS GV+EDK QGQNA+R+  SVGN+C DATSSEKEFDMNMEAQY+SDGE
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYDSDGE 60

Query: 315 PDGASRQQKEATADDQDDTRESNVETTSRKASAVGRW 425
           PDG+SR Q EATADD D  +ESN++TT  K + VGRW
Sbjct: 61  PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRW 97


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/97 (63%), Positives = 73/97 (75%)
 Frame = +3

Query: 135 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECADATSSEKEFDMNMEAQYESDGE 314
           MAFF++F +D VS G +EDK  GQ+A+ I  SVGNE  D TSSEKEFDMN+EAQYESDG 
Sbjct: 1   MAFFRNFVNDTVSHGAMEDKGLGQDANNIHRSVGNEYTDGTSSEKEFDMNLEAQYESDGG 60

Query: 315 PDGASRQQKEATADDQDDTRESNVETTSRKASAVGRW 425
           PD A R Q E TADD+D  RESN++ +  KAS VGRW
Sbjct: 61  PDDACRLQNEGTADDRDGLRESNLQASGSKASTVGRW 97


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/97 (45%), Positives = 67/97 (69%)
 Frame = +3

Query: 135 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECADATSSEKEFDMNMEAQYESDGE 314
           MAFF+++ ++ V+  VL++K QGQN DR+ SSV NE  DATSSEK+F+  ++ QY+SDG+
Sbjct: 1   MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGD 60

Query: 315 PDGASRQQKEATADDQDDTRESNVETTSRKASAVGRW 425
            + A  Q + A ADD    R SN++ + R+ +  G+W
Sbjct: 61  TNDAGLQNEAAAADD-IGLRISNLQPSGRRTAMAGKW 96


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 2083

 Score = 84.3 bits (207), Expect(2) = 1e-15
 Identities = 46/70 (65%), Positives = 51/70 (72%)
 Frame = +3

Query: 216 RIRSSVGNECADATSSEKEFDMNMEAQYESDGEPDGASRQQKEATADDQDDTRESNVETT 395
           +I++ VG   AD T SEKEF MNMEAQYESD EPD AS +Q EA A D+  TRESNVETT
Sbjct: 10  KIKARVGQN-ADRTRSEKEFYMNMEAQYESDAEPDDASGKQNEAAAVDRLSTRESNVETT 68

Query: 396 SRKASAVGRW 425
           SR  SA  RW
Sbjct: 69  SRNPSASERW 78



 Score = 23.5 bits (49), Expect(2) = 1e-15
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 163 MQFHLGSWKIKSK 201
           MQF++ SWKIK++
Sbjct: 2   MQFYVESWKIKAR 14


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