BLASTX nr result
ID: Glycyrrhiza24_contig00022020
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00022020 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding... 146 2e-33 ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding... 145 3e-33 ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M... 127 1e-27 ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding... 93 2e-17 ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca... 84 1e-15 >ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine max] Length = 1764 Score = 146 bits (369), Expect = 2e-33 Identities = 69/97 (71%), Positives = 81/97 (83%) Frame = +3 Query: 135 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECADATSSEKEFDMNMEAQYESDGE 314 MAFF++F +D VS GV+EDK QGQNA+R+ SVGN+C DATSSEKEFDMNMEAQYESDGE Sbjct: 1 MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYESDGE 60 Query: 315 PDGASRQQKEATADDQDDTRESNVETTSRKASAVGRW 425 PDG+SR Q EATADD D +ESN++TT K + VGRW Sbjct: 61 PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRW 97 >ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine max] Length = 1767 Score = 145 bits (366), Expect = 3e-33 Identities = 68/97 (70%), Positives = 81/97 (83%) Frame = +3 Query: 135 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECADATSSEKEFDMNMEAQYESDGE 314 MAFF++F +D VS GV+EDK QGQNA+R+ SVGN+C DATSSEKEFDMNMEAQY+SDGE Sbjct: 1 MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYDSDGE 60 Query: 315 PDGASRQQKEATADDQDDTRESNVETTSRKASAVGRW 425 PDG+SR Q EATADD D +ESN++TT K + VGRW Sbjct: 61 PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRW 97 >ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|355518633|gb|AET00257.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] Length = 1739 Score = 127 bits (318), Expect = 1e-27 Identities = 62/97 (63%), Positives = 73/97 (75%) Frame = +3 Query: 135 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECADATSSEKEFDMNMEAQYESDGE 314 MAFF++F +D VS G +EDK GQ+A+ I SVGNE D TSSEKEFDMN+EAQYESDG Sbjct: 1 MAFFRNFVNDTVSHGAMEDKGLGQDANNIHRSVGNEYTDGTSSEKEFDMNLEAQYESDGG 60 Query: 315 PDGASRQQKEATADDQDDTRESNVETTSRKASAVGRW 425 PD A R Q E TADD+D RESN++ + KAS VGRW Sbjct: 61 PDDACRLQNEGTADDRDGLRESNLQASGSKASTVGRW 97 >ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis vinifera] Length = 1764 Score = 93.2 bits (230), Expect = 2e-17 Identities = 44/97 (45%), Positives = 67/97 (69%) Frame = +3 Query: 135 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECADATSSEKEFDMNMEAQYESDGE 314 MAFF+++ ++ V+ VL++K QGQN DR+ SSV NE DATSSEK+F+ ++ QY+SDG+ Sbjct: 1 MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGD 60 Query: 315 PDGASRQQKEATADDQDDTRESNVETTSRKASAVGRW 425 + A Q + A ADD R SN++ + R+ + G+W Sbjct: 61 TNDAGLQNEAAAADD-IGLRISNLQPSGRRTAMAGKW 96 >ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula] gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase [Medicago truncatula] Length = 2083 Score = 84.3 bits (207), Expect(2) = 1e-15 Identities = 46/70 (65%), Positives = 51/70 (72%) Frame = +3 Query: 216 RIRSSVGNECADATSSEKEFDMNMEAQYESDGEPDGASRQQKEATADDQDDTRESNVETT 395 +I++ VG AD T SEKEF MNMEAQYESD EPD AS +Q EA A D+ TRESNVETT Sbjct: 10 KIKARVGQN-ADRTRSEKEFYMNMEAQYESDAEPDDASGKQNEAAAVDRLSTRESNVETT 68 Query: 396 SRKASAVGRW 425 SR SA RW Sbjct: 69 SRNPSASERW 78 Score = 23.5 bits (49), Expect(2) = 1e-15 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = +1 Query: 163 MQFHLGSWKIKSK 201 MQF++ SWKIK++ Sbjct: 2 MQFYVESWKIKAR 14