BLASTX nr result

ID: Glycyrrhiza24_contig00022019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00022019
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595756.1| Cleavage stimulation factor subunit 1-like p...   350   8e-95
ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subun...   344   4e-93
ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   326   1e-87
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   317   5e-85
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   309   1e-82

>ref|XP_003595756.1| Cleavage stimulation factor subunit 1-like protein [Medicago
           truncatula] gi|355484804|gb|AES66007.1| Cleavage
           stimulation factor subunit 1-like protein [Medicago
           truncatula]
          Length = 487

 Score =  350 bits (898), Expect = 8e-95
 Identities = 168/178 (94%), Positives = 175/178 (98%)
 Frame = +1

Query: 1   RCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVIRTYYDHIQPINDLD 180
           RCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSV++TYYDHIQP+NDLD
Sbjct: 130 RCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVVKTYYDHIQPVNDLD 189

Query: 181 FHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSFHPSGDFLLAGTDHAI 360
           F+PQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSFHPSGDFLLAGTDHAI
Sbjct: 190 FNPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSFHPSGDFLLAGTDHAI 249

Query: 361 PHLYDINTFQCYLSANIPDVGPNGAINQVRYSSTGAMYVTASKDGAIRLWDGITADCV 534
           PHLYDINTFQCYLSANIPD  PNGAINQVRYS +G+MYVTASKDGAIRLWDGITA+CV
Sbjct: 250 PHLYDINTFQCYLSANIPDANPNGAINQVRYSCSGSMYVTASKDGAIRLWDGITANCV 307


>ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subunit 1-like [Glycine max]
          Length = 425

 Score =  344 bits (883), Expect = 4e-93
 Identities = 165/178 (92%), Positives = 173/178 (97%)
 Frame = +1

Query: 1   RCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVIRTYYDHIQPINDLD 180
           RCARFS DGRFVATGSADTSIKLFEVSKIKQMLLP+AKDGPVR VIRTYYDHIQPINDLD
Sbjct: 120 RCARFSADGRFVATGSADTSIKLFEVSKIKQMLLPEAKDGPVRPVIRTYYDHIQPINDLD 179

Query: 181 FHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSFHPSGDFLLAGTDHAI 360
           FHPQGTIL+SGAKDQTIKFFDISKTNAKR+YRVIQDTHNVRSVSFHPSGDFLLAGTDHAI
Sbjct: 180 FHPQGTILISGAKDQTIKFFDISKTNAKRAYRVIQDTHNVRSVSFHPSGDFLLAGTDHAI 239

Query: 361 PHLYDINTFQCYLSANIPDVGPNGAINQVRYSSTGAMYVTASKDGAIRLWDGITADCV 534
           PHLYDINTFQCYLSANIP+  P+GAINQ+RYS TG+MYVTASKDGAIRLWDGITA+CV
Sbjct: 240 PHLYDINTFQCYLSANIPETSPSGAINQIRYSCTGSMYVTASKDGAIRLWDGITANCV 297


>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  326 bits (836), Expect = 1e-87
 Identities = 151/178 (84%), Positives = 167/178 (93%)
 Frame = +1

Query: 1   RCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVIRTYYDHIQPINDLD 180
           RCARFSPDGRFVATGSADTSIKLFE+SKIKQM+L DA+DGPVR VIRT+YDHIQPINDLD
Sbjct: 130 RCARFSPDGRFVATGSADTSIKLFEISKIKQMMLSDARDGPVRPVIRTFYDHIQPINDLD 189

Query: 181 FHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSFHPSGDFLLAGTDHAI 360
           FHPQ T+L+SGAKD TIKFFD SK  AK+++RVIQDTHNVRSVSFHPSGDFLLAGTDH I
Sbjct: 190 FHPQNTVLISGAKDHTIKFFDFSKATAKKAFRVIQDTHNVRSVSFHPSGDFLLAGTDHQI 249

Query: 361 PHLYDINTFQCYLSANIPDVGPNGAINQVRYSSTGAMYVTASKDGAIRLWDGITADCV 534
            HLYD+NTFQCYLSAN+P++G NGAINQVRYSSTG MYVTASKDGAIRLWDG+TA+C+
Sbjct: 250 AHLYDVNTFQCYLSANVPEIGMNGAINQVRYSSTGGMYVTASKDGAIRLWDGVTANCI 307


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score =  317 bits (813), Expect = 5e-85
 Identities = 146/178 (82%), Positives = 165/178 (92%)
 Frame = +1

Query: 1   RCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVIRTYYDHIQPINDLD 180
           RCARFS DGRFVATGSAD SIKLFEV+KIKQM+LPDAKDGPVR VIRT+YDHIQPINDLD
Sbjct: 132 RCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLD 191

Query: 181 FHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSFHPSGDFLLAGTDHAI 360
           FHPQ T+LVSGAKD TIKFFD SK  AK+++RVIQDTHNVRS+S HPSGD+LLAGTDH I
Sbjct: 192 FHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHQI 251

Query: 361 PHLYDINTFQCYLSANIPDVGPNGAINQVRYSSTGAMYVTASKDGAIRLWDGITADCV 534
           PHLYD+NTFQC+LSAN+P++G NGAINQ+RYS+TG+MYVTASKDGA+RLWDGI A C+
Sbjct: 252 PHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWDGIGAKCI 309


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  309 bits (792), Expect = 1e-82
 Identities = 148/180 (82%), Positives = 164/180 (91%), Gaps = 2/180 (1%)
 Frame = +1

Query: 1   RCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDA--KDGPVRSVIRTYYDHIQPIND 174
           RCARFS DGRFVATGSAD SIKLFE+SKIKQM+LPDA  +DGPVR VIRT+YDHIQPIND
Sbjct: 133 RCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDGPVRPVIRTFYDHIQPIND 192

Query: 175 LDFHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSFHPSGDFLLAGTDH 354
           LDFHPQ T+L+SGAKD TIKFFD SKT AKR++RVIQDTHNVRSVSFHPSGDFLLAGTDH
Sbjct: 193 LDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDH 252

Query: 355 AIPHLYDINTFQCYLSANIPDVGPNGAINQVRYSSTGAMYVTASKDGAIRLWDGITADCV 534
            + HLYD+NTFQCYLSAN+ D+G + +INQVRYSS G MYVTASKDGAIRLWDG+TA+CV
Sbjct: 253 PVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYVTASKDGAIRLWDGVTANCV 312


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