BLASTX nr result

ID: Glycyrrhiza24_contig00021992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021992
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518276.1| PREDICTED: MATE efflux family protein DTX1-l...    73   3e-11
ref|XP_003527862.1| PREDICTED: multidrug and toxin extrusion pro...    70   2e-10
ref|XP_003603676.1| Multidrug and toxin extrusion protein [Medic...    65   4e-09
ref|XP_003615399.1| Multidrug and toxin extrusion protein [Medic...    65   8e-09
ref|XP_003523763.1| PREDICTED: multidrug and toxin extrusion pro...    60   1e-07

>ref|XP_003518276.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 527

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 50/121 (41%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
 Frame = -3

Query: 422 WLGLLAAQASCAALMLFVLFTTDWNAQAQRAKDLXXXXXXXXXXXXXXXXXPAVFAKTLC 243
           WLGLLAAQASCA LM +VL TTDWN Q +RAK+L                  +      C
Sbjct: 410 WLGLLAAQASCAGLMFYVLCTTDWNVQVERAKELTKSSTTTTTAMTATIATTSCSTSPNC 469

Query: 242 D----------DNNIHRAPH--LQEIVVITXXXXXXXDELNKTVPSLETDPLIVPTSTKH 99
           +          + N+++  H  L+EIV+ +       DEL K + S+ETDPLI+PT TKH
Sbjct: 470 NYKLLPTLTKKEANMNKNAHVCLEEIVITS---GGGGDELTK-ISSVETDPLIIPT-TKH 524

Query: 98  T 96
           T
Sbjct: 525 T 525


>ref|XP_003527862.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 548

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 50/105 (47%), Positives = 58/105 (55%)
 Frame = -3

Query: 422 WLGLLAAQASCAALMLFVLFTTDWNAQAQRAKDLXXXXXXXXXXXXXXXXXPAVFAKTLC 243
           WLGLLAAQ SCAALM+FVL TTDWNAQ QRA +L                 P+    T C
Sbjct: 462 WLGLLAAQGSCAALMIFVLCTTDWNAQVQRANEL-----------TNANSAPSKLPTTEC 510

Query: 242 DDNNIHRAPHLQEIVVITXXXXXXXDELNKTVPSLETDPLIVPTS 108
             NN+     L EI+V+        DE+    PSLETDPLI+ TS
Sbjct: 511 --NNV----RLPEILVM--DTEDHHDEIITKTPSLETDPLIIHTS 547


>ref|XP_003603676.1| Multidrug and toxin extrusion protein [Medicago truncatula]
           gi|355492724|gb|AES73927.1| Multidrug and toxin
           extrusion protein [Medicago truncatula]
          Length = 399

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/102 (44%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = -3

Query: 422 WLGLLAAQASCAALMLFVLFTTDWNAQAQRAKDLXXXXXXXXXXXXXXXXXPAVFAKTLC 243
           W GLLAAQ SCA LML+VL TTDWN Q +RAK+L                   V    L 
Sbjct: 305 WFGLLAAQGSCAILMLYVLCTTDWNDQIERAKNLTKATTTIGFSDSTTFITKTV----LR 360

Query: 242 DDNNIHRAPHLQEIVVITXXXXXXXDELNKT-VPSLETDPLI 120
            DNN ++   L+EI+VIT       D+  KT   SLE+DPL+
Sbjct: 361 HDNNNNKCGCLEEIIVIT------HDDATKTCTHSLESDPLL 396


>ref|XP_003615399.1| Multidrug and toxin extrusion protein [Medicago truncatula]
           gi|355516734|gb|AES98357.1| Multidrug and toxin
           extrusion protein [Medicago truncatula]
          Length = 560

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 42/110 (38%), Positives = 57/110 (51%)
 Frame = -3

Query: 422 WLGLLAAQASCAALMLFVLFTTDWNAQAQRAKDLXXXXXXXXXXXXXXXXXPAVFAKTLC 243
           W+GLLAAQ SCA LML VL  TDWN Q QRAK+L                   +F +   
Sbjct: 463 WIGLLAAQGSCAMLMLVVLCRTDWNLQVQRAKEL----TKSSTTSDDVDAKLPIFMEGNV 518

Query: 242 DDNNIHRAPHLQEIVVITXXXXXXXDELNKTVPSLETDPLIVPTSTKHTL 93
           + NN+H    L+EIV+          ++     SLETDPLI+ ++T + +
Sbjct: 519 NKNNVHGC--LEEIVI--------THDVFTKKSSLETDPLIITSTTTNCI 558


>ref|XP_003523763.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 537

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 422 WLGLLAAQASCAALMLFVLFTTDWNAQAQRAKDL 321
           WLGLLAAQASCA+LM+FVL TTDWNAQ +RA +L
Sbjct: 461 WLGLLAAQASCASLMIFVLCTTDWNAQVRRANEL 494


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