BLASTX nr result

ID: Glycyrrhiza24_contig00021983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021983
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552944.1| PREDICTED: RING-H2 finger protein ATL60-like...   156   2e-36
ref|XP_002278655.1| PREDICTED: RING-H2 finger protein ATL5 [Viti...   132   4e-29
ref|XP_004145311.1| PREDICTED: RING-H2 finger protein ATL2-like ...   115   4e-24
ref|XP_003544302.1| PREDICTED: RING-H2 finger protein ATL3-like ...   114   8e-24
ref|XP_002521616.1| RING-H2 finger protein ATL3F, putative [Rici...   105   4e-21

>ref|XP_003552944.1| PREDICTED: RING-H2 finger protein ATL60-like [Glycine max]
          Length = 268

 Score =  156 bits (394), Expect = 2e-36
 Identities = 86/143 (60%), Positives = 93/143 (65%), Gaps = 5/143 (3%)
 Frame = -1

Query: 435 DVLGPARFHHFHSFNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXECV 256
           DVLGPARFHHFHSFNIEDS  S   TKGLDSS I TIPLF+Y               ECV
Sbjct: 78  DVLGPARFHHFHSFNIEDS--SPLTTKGLDSSTIRTIPLFIY-EPNNNKVQEEEEELECV 134

Query: 255 ICLSAFEDGEMGRCLPKCGHGFHVECIDMWLGSHSNCPICRAPIVGVGVLENNIDSSSAV 76
           ICLSAF  GE+GRCLPKCGHGFHVECIDMWL SHSNCPICRA I  V  +E N+      
Sbjct: 135 ICLSAFVSGEVGRCLPKCGHGFHVECIDMWLSSHSNCPICRASI--VASVEENVSRVVVS 192

Query: 75  GDNNNND-----ASSGFVEIVIE 22
             +++ D          VEIVIE
Sbjct: 193 SSDHHRDELYYGGDHDLVEIVIE 215


>ref|XP_002278655.1| PREDICTED: RING-H2 finger protein ATL5 [Vitis vinifera]
           gi|297745866|emb|CBI15922.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/102 (62%), Positives = 73/102 (71%)
 Frame = -1

Query: 432 VLGPARFHHFHSFNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXECVI 253
           VL P RFHHFH+F  E + LS S TKGLDSS I++IPLF+Y +              CVI
Sbjct: 70  VLRPTRFHHFHTFTFETT-LSGSPTKGLDSSAISSIPLFVYKAEEHKHGLE------CVI 122

Query: 252 CLSAFEDGEMGRCLPKCGHGFHVECIDMWLGSHSNCPICRAP 127
           CLS FED ++GR LPKCGH FHV+CIDMWL SHSNCPICRAP
Sbjct: 123 CLSVFEDDDVGRNLPKCGHAFHVQCIDMWLHSHSNCPICRAP 164


>ref|XP_004145311.1| PREDICTED: RING-H2 finger protein ATL2-like [Cucumis sativus]
           gi|449472887|ref|XP_004153724.1| PREDICTED: RING-H2
           finger protein ATL2-like [Cucumis sativus]
           gi|449527173|ref|XP_004170587.1| PREDICTED: RING-H2
           finger protein ATL2-like [Cucumis sativus]
          Length = 245

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/121 (50%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
 Frame = -1

Query: 432 VLGPARFHHFHS--FNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXEC 259
           VL P R   F S  F++  +P   S++KGLD S+I+ IPLF+Y S              C
Sbjct: 65  VLAPPRLSRFDSVPFDLGSAP---SNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME-C 120

Query: 258 VICLSAFEDGEMGRCLPKCGHGFHVECIDMWLGSHSNCPICRAPIVGVGVLENNIDSSSA 79
           VICLS FE+ E+GR LPKC HGFH+ECIDMWL SH+NCP+CR P++G  V     D S A
Sbjct: 121 VICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAV-----DCSDA 175

Query: 78  V 76
           V
Sbjct: 176 V 176


>ref|XP_003544302.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 241

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/99 (57%), Positives = 64/99 (64%)
 Frame = -1

Query: 408 HFHSFNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXECVICLSAFEDG 229
           HFHS NIE SP  S   KGLDS+ ++ IPLF+                 CVICLS  E+G
Sbjct: 79  HFHSINIEASPTCS---KGLDSATLSAIPLFVQGPEKTEETEELE----CVICLSVIEEG 131

Query: 228 EMGRCLPKCGHGFHVECIDMWLGSHSNCPICRAPIVGVG 112
           E+GR LPKCGH FH+ECIDMWL  H NCPICRAPIV  G
Sbjct: 132 EIGRRLPKCGHAFHMECIDMWLSLHCNCPICRAPIVVSG 170


>ref|XP_002521616.1| RING-H2 finger protein ATL3F, putative [Ricinus communis]
           gi|223539171|gb|EEF40765.1| RING-H2 finger protein
           ATL3F, putative [Ricinus communis]
          Length = 266

 Score =  105 bits (262), Expect = 4e-21
 Identities = 66/164 (40%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
 Frame = -1

Query: 432 VLGPARFHHFHSFNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXECVI 253
           VL  ARFH +  +            KGL  S I++IPLF+Y  A            ECVI
Sbjct: 72  VLLSARFHQYFHYP----------RKGLHQSAISSIPLFVYGGA----DEEHEQGLECVI 117

Query: 252 CLSAFEDGEMGRCLPKCGHGFHVECIDMWLGSHSNCPICRAPIVGVGV------------ 109
           CLS FE  E+GR L KCGH FHVECIDMWL SH+NCPICRAP+V V V            
Sbjct: 118 CLSNFEGNEVGRRLTKCGHCFHVECIDMWLHSHTNCPICRAPVVVVLVSDIANGDVKSVS 177

Query: 108 ---LENNIDSSSAVGD-----NNNNDASSGFVEIVIEDNTNNAP 1
               E + + S ++G      +NN +  +G   +V+  N  ++P
Sbjct: 178 MEPAETDHEESRSLGSHVIEVSNNPENENGTTSVVVNHNFLSSP 221


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