BLASTX nr result
ID: Glycyrrhiza24_contig00021976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00021976
(451 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003623623.1| Pentatricopeptide repeat-containing protein ... 200 1e-49
ref|XP_002528689.1| pentatricopeptide repeat-containing protein,... 130 9e-29
ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25
gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japo... 92 6e-17
ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group] g... 92 6e-17
>ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498638|gb|AES79841.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 583
Score = 200 bits (508), Expect = 1e-49
Identities = 98/138 (71%), Positives = 121/138 (87%), Gaps = 2/138 (1%)
Frame = +1
Query: 7 TSRFRVKGLVQRVTSLSSTKNKTELLLQILEKDA-EF-LQTISDFNHLLMALVIAQEPEV 180
T+R +K LVQ++TSLS++KNKT+LLLQIL+ A EF +QTISDFNHLLMALVIAQ+P+
Sbjct: 70 TTRSEIKNLVQKITSLSTSKNKTQLLLQILDNTASEFQIQTISDFNHLLMALVIAQKPDF 129
Query: 181 CLGIFTKLQSFNLVPDGCTYSIMIRCHCERNDVDEARKALFALLENGFQPDSATITVLIN 360
C +FTKL SF+LVPD CTYSIMIRCHC +N+++EA++ LF +LENGF+PDSATITVLIN
Sbjct: 130 CQTMFTKLSSFHLVPDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLIN 189
Query: 361 SLCKRGKVNKALEVFELM 414
SLCKRGKV KA+EVFE +
Sbjct: 190 SLCKRGKVKKAMEVFEFL 207
>ref|XP_002528689.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531861|gb|EEF33678.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 271
Score = 130 bits (328), Expect = 9e-29
Identities = 67/141 (47%), Positives = 97/141 (68%)
Frame = +1
Query: 10 SRFRVKGLVQRVTSLSSTKNKTELLLQILEKDAEFLQTISDFNHLLMALVIAQEPEVCLG 189
SR +V+ L+ + +L K +TE+L + KD E + +ISDFN LLMALVIA E ++ L
Sbjct: 52 SRLQVEKLLDAIRALPF-KGRTEIL-DVFGKDGE-IPSISDFNDLLMALVIANELDLALN 108
Query: 190 IFTKLQSFNLVPDGCTYSIMIRCHCERNDVDEARKALFALLENGFQPDSATITVLINSLC 369
+++ + + LVPD T+SI+IRCHC+RND DEA++ L +LENG P+ T T LINS C
Sbjct: 109 MYSDVSTLGLVPDSWTFSIVIRCHCKRNDADEAKRVLDRMLENGLNPNVVTFTTLINSFC 168
Query: 370 KRGKVNKALEVFELMGSCNCK 432
K+GK+ KA EV ++M + C+
Sbjct: 169 KKGKLQKAYEVIDVMNTIGCQ 189
>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
predicted protein [Populus trichocarpa]
Length = 535
Score = 119 bits (298), Expect = 3e-25
Identities = 57/141 (40%), Positives = 94/141 (66%)
Frame = +1
Query: 10 SRFRVKGLVQRVTSLSSTKNKTELLLQILEKDAEFLQTISDFNHLLMALVIAQEPEVCLG 189
S+F+V L+ V +L K + + ++++L+K+ F ISDFN +LMALV A E ++ L
Sbjct: 105 SKFQVLDLLNAVKALPC-KERVDYIVRVLDKEIGFFN-ISDFNDVLMALVTANESDLVLK 162
Query: 190 IFTKLQSFNLVPDGCTYSIMIRCHCERNDVDEARKALFALLENGFQPDSATITVLINSLC 369
+++ L ++L P+ T+SIM+RCHC++ D EA++ L +++ GF P+ AT+T+LINS C
Sbjct: 163 LYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMMQKGFNPNVATLTILINSFC 222
Query: 370 KRGKVNKALEVFELMGSCNCK 432
K G++ +VFE+M CK
Sbjct: 223 KMGQLQNTFQVFEVMDRIGCK 243
>gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japonica Group]
Length = 523
Score = 91.7 bits (226), Expect = 6e-17
Identities = 47/147 (31%), Positives = 85/147 (57%)
Frame = +1
Query: 1 RTTSRFRVKGLVQRVTSLSSTKNKTELLLQILEKDAEFLQTISDFNHLLMALVIAQEPEV 180
R +R R + +R+ L + +L +L++D L T+SD+N +L AL +A + +
Sbjct: 90 RRGTRIRARDCAKRIMGLPVEERVK--VLDLLQRDDGAL-TVSDYNDILSALAMAGDHDS 146
Query: 181 CLGIFTKLQSFNLVPDGCTYSIMIRCHCERNDVDEARKALFALLENGFQPDSATITVLIN 360
+ +F L+ + PD +Y+ ++C C + DEA++AL ++ GF+P AT + ++
Sbjct: 147 AVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVG 206
Query: 361 SLCKRGKVNKALEVFELMGSCNCKAII 441
LCKRG+V +A+EVF+ M + C+ I
Sbjct: 207 CLCKRGRVTRAMEVFDTMRAVGCEPTI 233
>ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|108708021|gb|ABF95816.1| expressed protein [Oryza
sativa Japonica Group] gi|113548508|dbj|BAF11951.1|
Os03g0336000 [Oryza sativa Japonica Group]
gi|125543773|gb|EAY89912.1| hypothetical protein
OsI_11461 [Oryza sativa Indica Group]
gi|215712300|dbj|BAG94427.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 545
Score = 91.7 bits (226), Expect = 6e-17
Identities = 47/147 (31%), Positives = 85/147 (57%)
Frame = +1
Query: 1 RTTSRFRVKGLVQRVTSLSSTKNKTELLLQILEKDAEFLQTISDFNHLLMALVIAQEPEV 180
R +R R + +R+ L + +L +L++D L T+SD+N +L AL +A + +
Sbjct: 90 RRGTRIRARDCAKRIMGLPVEERVK--VLDLLQRDDGAL-TVSDYNDILSALAMAGDHDS 146
Query: 181 CLGIFTKLQSFNLVPDGCTYSIMIRCHCERNDVDEARKALFALLENGFQPDSATITVLIN 360
+ +F L+ + PD +Y+ ++C C + DEA++AL ++ GF+P AT + ++
Sbjct: 147 AVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVG 206
Query: 361 SLCKRGKVNKALEVFELMGSCNCKAII 441
LCKRG+V +A+EVF+ M + C+ I
Sbjct: 207 CLCKRGRVTRAMEVFDTMRAVGCEPTI 233