BLASTX nr result

ID: Glycyrrhiza24_contig00021908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021908
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517347.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   213   1e-53
ref|XP_003538789.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   212   3e-53
ref|XP_003611578.1| GRAS family transcription factor [Medicago t...   210   8e-53
ref|XP_004141867.1| PREDICTED: protein SHORT-ROOT-like [Cucumis ...   200   9e-50
ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2...   199   3e-49

>ref|XP_003517347.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 476

 Score =  213 bits (543), Expect = 1e-53
 Identities = 99/110 (90%), Positives = 107/110 (97%)
 Frame = +2

Query: 2   LRWFRVYFEALDESFPRTSNERLMLERAAGRAIVDLVACAPAESVERRETAARWSQRLHG 181
           LRWFRVYFEALDESFPRTSNERL+LERAAGRA+VDLVAC+ AESVERRETAARW++R+HG
Sbjct: 361 LRWFRVYFEALDESFPRTSNERLLLERAAGRAVVDLVACSAAESVERRETAARWARRMHG 420

Query: 182 GGFNTVTFSEEVCDDVRALLRRYKEGWAMTQCNDAGIFLTWKEQPVVWAS 331
           GG NTV FSEEVCDDVRALLRRY+EGWAMTQC+DAGIFLTWKEQPVVWAS
Sbjct: 421 GGLNTVAFSEEVCDDVRALLRRYREGWAMTQCSDAGIFLTWKEQPVVWAS 470


>ref|XP_003538789.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 482

 Score =  212 bits (539), Expect = 3e-53
 Identities = 100/111 (90%), Positives = 108/111 (97%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2   LRWFRVYFEALDESFPRTSNERLMLERAAGRAIVDLVACAPAESVERRETAARWSQRLH- 178
           LRWFRVYFEALDESFPRTSNERLMLERAAGRA+VDLVAC+PA+SVERRE AARW++R+H 
Sbjct: 366 LRWFRVYFEALDESFPRTSNERLMLERAAGRAVVDLVACSPADSVERREKAARWARRMHG 425

Query: 179 GGGFNTVTFSEEVCDDVRALLRRYKEGWAMTQCNDAGIFLTWKEQPVVWAS 331
           GGGFNTV FSEEVCDDVRALLRRY+EGWAMTQC+DAGIFLTWKEQPVVWAS
Sbjct: 426 GGGFNTVAFSEEVCDDVRALLRRYREGWAMTQCSDAGIFLTWKEQPVVWAS 476


>ref|XP_003611578.1| GRAS family transcription factor [Medicago truncatula]
           gi|355512913|gb|AES94536.1| GRAS family transcription
           factor [Medicago truncatula]
          Length = 491

 Score =  210 bits (535), Expect = 8e-53
 Identities = 98/110 (89%), Positives = 104/110 (94%)
 Frame = +2

Query: 2   LRWFRVYFEALDESFPRTSNERLMLERAAGRAIVDLVACAPAESVERRETAARWSQRLHG 181
           LRWFRVYFEAL+ESFP+TSNERLMLER AGR IVDLVACAPAES+ERRETA RWS+RLHG
Sbjct: 378 LRWFRVYFEALEESFPKTSNERLMLEREAGRGIVDLVACAPAESIERRETAVRWSRRLHG 437

Query: 182 GGFNTVTFSEEVCDDVRALLRRYKEGWAMTQCNDAGIFLTWKEQPVVWAS 331
            GFNTV FSEEVCDDVRALLRRYKEGW+M +CNDAGIFLTWKEQPVVWAS
Sbjct: 438 RGFNTVAFSEEVCDDVRALLRRYKEGWSMIRCNDAGIFLTWKEQPVVWAS 487


>ref|XP_004141867.1| PREDICTED: protein SHORT-ROOT-like [Cucumis sativus]
           gi|449534120|ref|XP_004174016.1| PREDICTED: protein
           SHORT-ROOT-like [Cucumis sativus]
          Length = 490

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/111 (88%), Positives = 103/111 (92%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2   LRWFRVYFEALDESFPRTSNERLMLERAAGRAIVDLVACAPAESVERRETAARWSQRLHG 181
           LRWFRVYFE LDESF RTSNERLMLERAAGRAIVDLVAC+ AESVERRETA+RW+QRLHG
Sbjct: 376 LRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHG 435

Query: 182 GGFNTVTFSEEVCDDVRALLRRYKEGWAMTQCND-AGIFLTWKEQPVVWAS 331
            GF  VTFS+EVCDDVRALLRRYKEGWAMTQ +D AGIFLTWKEQPVVWAS
Sbjct: 436 NGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWAS 486


>ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera]
          Length = 509

 Score =  199 bits (505), Expect = 3e-49
 Identities = 92/110 (83%), Positives = 102/110 (92%)
 Frame = +2

Query: 2   LRWFRVYFEALDESFPRTSNERLMLERAAGRAIVDLVACAPAESVERRETAARWSQRLHG 181
           LRWFRVY E+LDESFPRTSNERLMLERAAGRAIVDLVAC P+ES+ERRETA RWSQRLH 
Sbjct: 396 LRWFRVYLESLDESFPRTSNERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHA 455

Query: 182 GGFNTVTFSEEVCDDVRALLRRYKEGWAMTQCNDAGIFLTWKEQPVVWAS 331
            GF+ V+FS+EVCDDVRALLRRYKEGW+MTQ +DAGIFL+WK+QPVVW S
Sbjct: 456 SGFSPVSFSDEVCDDVRALLRRYKEGWSMTQSSDAGIFLSWKDQPVVWTS 505


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