BLASTX nr result

ID: Glycyrrhiza24_contig00021901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021901
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30112.3| unnamed protein product [Vitis vinifera]              149   4e-34
ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methy...   149   4e-34
ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methy...   147   2e-33
ref|XP_003602607.1| hypothetical protein MTR_3g096190 [Medicago ...   145   6e-33
gb|ACJ85644.1| unknown [Medicago truncatula] gi|388511921|gb|AFK...   144   1e-32

>emb|CBI30112.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  149 bits (376), Expect = 4e-34
 Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
 Frame = +1

Query: 112 TLAGRCRNALYRSYHRRCRSYLIETMLSTRDQAIGDEENDNSVV-ELPGIPLAPRRQSSK 288
           T+ G  R     +Y +     L+E    T   A  DE     +  ELPGIPL P + ++K
Sbjct: 54  TIKGHKRKRREENYDKEEVKQLLEE--ETAATATQDENKAEEITHELPGIPLVPFKSNNK 111

Query: 289 DGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDFRPDIVHEALLQIMSSRL 468
            GV FILE+A L  A VGK YQ+L+ E+H +FLRK NKNP D+RPDI+H+ALL I+ S L
Sbjct: 112 TGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRPDILHQALLTILDSPL 171

Query: 469 RMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQNFSIKSKGNQ 627
             AGR+RAV++RT++G+L  V+P  +IP+T   F  +M +LLQ  SI + G +
Sbjct: 172 NKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKR 224


>ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera]
          Length = 271

 Score =  149 bits (376), Expect = 4e-34
 Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
 Frame = +1

Query: 112 TLAGRCRNALYRSYHRRCRSYLIETMLSTRDQAIGDEENDNSVV-ELPGIPLAPRRQSSK 288
           T+ G  R     +Y +     L+E    T   A  DE     +  ELPGIPL P + ++K
Sbjct: 6   TIKGHKRKRREENYDKEEVKQLLEE--ETAATATQDENKAEEITHELPGIPLVPFKSNNK 63

Query: 289 DGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDFRPDIVHEALLQIMSSRL 468
            GV FILE+A L  A VGK YQ+L+ E+H +FLRK NKNP D+RPDI+H+ALL I+ S L
Sbjct: 64  TGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRPDILHQALLTILDSPL 123

Query: 469 RMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQNFSIKSKGNQ 627
             AGR+RAV++RT++G+L  V+P  +IP+T   F  +M +LLQ  SI + G +
Sbjct: 124 NKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKR 176


>ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera] gi|296085405|emb|CBI29137.3| unnamed
           protein product [Vitis vinifera]
          Length = 271

 Score =  147 bits (371), Expect = 2e-33
 Identities = 79/172 (45%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
 Frame = +1

Query: 115 LAGRCRNALYRSYHRRCRSYLIETMLSTRDQAIGDEENDNSV-VELPGIPLAPRRQSSKD 291
           + G  R     +Y R     L+E    T   A  DE+    V +ELPGIPL P   ++K 
Sbjct: 7   IKGHKRKKREENYDREEVEQLLEE--ETAATATQDEKKAEEVTLELPGIPLVPSNLNNKT 64

Query: 292 GVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDFRPDIVHEALLQIMSSRLR 471
           GV FILE+A L  A VGK YQ+L+ E+H +FLRK NKNP ++RPDI+H+ALL I+ S L 
Sbjct: 65  GVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPAEYRPDILHQALLTILDSPLN 124

Query: 472 MAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQNFSIKSKGNQ 627
            AGR+RAV++RT++G+L  V+P  +IP+T   F  +M +LLQ  SI + G +
Sbjct: 125 KAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKR 176


>ref|XP_003602607.1| hypothetical protein MTR_3g096190 [Medicago truncatula]
           gi|355491655|gb|AES72858.1| hypothetical protein
           MTR_3g096190 [Medicago truncatula]
          Length = 282

 Score =  145 bits (366), Expect = 6e-33
 Identities = 72/130 (55%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
 Frame = +1

Query: 244 ELPGIPLAP--RRQSSKDGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDF 417
           ELPGIP+AP   + S K GV FILEKASL  A VGK YQ+LN +EH +FLRK +KNP D+
Sbjct: 58  ELPGIPIAPLNEKNSEKQGVIFILEKASLEVAKVGKTYQLLNSDEHSNFLRKHSKNPGDY 117

Query: 418 RPDIVHEALLQIMSSRLRMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQ 597
           RPDI H+ALL I+ S +  AGR++ V+IRT++G+LI V+P  +IP+T   F  +M ELLQ
Sbjct: 118 RPDICHQALLSILDSPVNKAGRLKMVYIRTEKGVLIEVKPYVRIPRTFKRFAGVMLELLQ 177

Query: 598 NFSIKSKGNQ 627
             SI + G +
Sbjct: 178 KLSITAAGKR 187


>gb|ACJ85644.1| unknown [Medicago truncatula] gi|388511921|gb|AFK44022.1| unknown
           [Medicago truncatula]
          Length = 282

 Score =  144 bits (364), Expect = 1e-32
 Identities = 72/130 (55%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
 Frame = +1

Query: 244 ELPGIPLAP--RRQSSKDGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDF 417
           ELPGIP+AP   + S K GV FILEKASL  A VGK YQ+LN +EH +FLRK +KNP D+
Sbjct: 58  ELPGIPIAPLNEKNSEKQGVIFILEKASLEVAKVGKTYQLLNSDEHSNFLRKHSKNPGDY 117

Query: 418 RPDIVHEALLQIMSSRLRMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQ 597
           RPDI H+ALL I+ S +  AGR++ V+IRT++G+LI V+P  +IP+T   F  +M ELLQ
Sbjct: 118 RPDICHQALLSILDSPVNKAGRLKMVYIRTEKGVLIEVKPYVRIPRTSKRFAGVMLELLQ 177

Query: 598 NFSIKSKGNQ 627
             SI + G +
Sbjct: 178 KLSITAAGKR 187


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