BLASTX nr result

ID: Glycyrrhiza24_contig00021886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021886
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]         213   2e-53
gb|ACU21437.1| unknown [Glycine max]                                  208   5e-52
ref|NP_001237137.1| cyclin d2 [Glycine max] gi|42362309|gb|AAS13...   201   1e-49
ref|XP_003602950.1| Cyclin d2 [Medicago truncatula] gi|355491998...   197   1e-48
ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]         195   4e-48

>ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 352

 Score =  213 bits (542), Expect = 2e-53
 Identities = 115/162 (70%), Positives = 124/162 (76%), Gaps = 6/162 (3%)
 Frame = +1

Query: 1   MQAITPFSFIDYFLHKINDDXXXXXXXXXXXXXXXXXXXKGIDFLEFKPSEIAAAVAMCV 180
           MQAITPF+F+DYFL KINDD                   +GIDFLEFKPSEIAAAVAM V
Sbjct: 192 MQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDFLEFKPSEIAAAVAMYV 251

Query: 181 VGETQTVDTGNTISILIQHVEKERLLKCVKMIQELSSN------SSASVPCVPQSPIGVL 342
           +GETQTVDTG   S LIQHVEKERLLKCVKMIQELS N      SSASV C+PQSPIGVL
Sbjct: 252 MGETQTVDTGKATSFLIQHVEKERLLKCVKMIQELSCNSGSAKDSSASVTCLPQSPIGVL 311

Query: 343 DAVCFSYRSDDTNAGGSCSSSHNNSPDAKRRKLNKTCGEELL 468
           DA+CFSY+SDDTNAG S +SSH NSP AKRRKLNKTCG +LL
Sbjct: 312 DALCFSYKSDDTNAGSSVNSSH-NSPVAKRRKLNKTCGADLL 352


>gb|ACU21437.1| unknown [Glycine max]
          Length = 352

 Score =  208 bits (530), Expect = 5e-52
 Identities = 112/162 (69%), Positives = 124/162 (76%), Gaps = 6/162 (3%)
 Frame = +1

Query: 1   MQAITPFSFIDYFLHKINDDXXXXXXXXXXXXXXXXXXXKGIDFLEFKPSEIAAAVAMCV 180
           MQAITPF+F+DYFL KINDD                   +GIDFLEFKPSEIAAAVAM V
Sbjct: 192 MQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDFLEFKPSEIAAAVAMYV 251

Query: 181 VGETQTVDTGNTISILIQHVEKERLLKCVKMIQELSSN------SSASVPCVPQSPIGVL 342
           +GETQTVDTG  IS+LIQHVEKERLLKCV+MIQELS N      SSASV C+PQSPIGVL
Sbjct: 252 MGETQTVDTGKAISVLIQHVEKERLLKCVQMIQELSCNSGSAKDSSASVTCLPQSPIGVL 311

Query: 343 DAVCFSYRSDDTNAGGSCSSSHNNSPDAKRRKLNKTCGEELL 468
           DA+CF+Y+SDDTNA  SC +S +NSP AKRRKLNKTCG E L
Sbjct: 312 DALCFNYKSDDTNA-SSCVNSSHNSPVAKRRKLNKTCGAEQL 352


>ref|NP_001237137.1| cyclin d2 [Glycine max] gi|42362309|gb|AAS13370.1| cyclin d2
           [Glycine max]
          Length = 361

 Score =  201 bits (510), Expect = 1e-49
 Identities = 112/171 (65%), Positives = 124/171 (72%), Gaps = 15/171 (8%)
 Frame = +1

Query: 1   MQAITPFSFIDYFLHKINDDXXXXXXXXXXXXXXXXXXXKGIDFLEFKPSEIAAAV---- 168
           MQAITPF+F+DYFL KINDD                   +GIDFLEFKPSEIAAAV    
Sbjct: 192 MQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDFLEFKPSEIAAAVKPSE 251

Query: 169 -----AMCVVGETQTVDTGNTISILIQHVEKERLLKCVKMIQELSSN------SSASVPC 315
                AM V+GETQTVDTG  IS+LIQHVEKERLLKCV+MIQELS N      SSASV C
Sbjct: 252 IAAAVAMYVMGETQTVDTGKAISVLIQHVEKERLLKCVQMIQELSCNSGSAKDSSASVTC 311

Query: 316 VPQSPIGVLDAVCFSYRSDDTNAGGSCSSSHNNSPDAKRRKLNKTCGEELL 468
           +PQSPIGVLDA+CF+Y+SDDTNA  SC +S +NSP AKRRKLNKTCG E L
Sbjct: 312 LPQSPIGVLDALCFNYKSDDTNA-SSCVNSSHNSPVAKRRKLNKTCGAEQL 361


>ref|XP_003602950.1| Cyclin d2 [Medicago truncatula] gi|355491998|gb|AES73201.1| Cyclin
           d2 [Medicago truncatula]
          Length = 362

 Score =  197 bits (500), Expect = 1e-48
 Identities = 107/167 (64%), Positives = 123/167 (73%), Gaps = 11/167 (6%)
 Frame = +1

Query: 1   MQAITPFSFIDYFLHKI-NDDXXXXXXXXXXXXXXXXXXXKGIDFLEFKPSEIAAAVAMC 177
           MQAITPFSFI+ FL KI +DD                   KG+DFLEFKPSEIAAAVA C
Sbjct: 196 MQAITPFSFIECFLSKIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAAVATC 255

Query: 178 VVGETQTVDTGNTISILIQHVEKERLLKCVKMIQELSSN--------SSASVPCVPQSPI 333
           VVGETQ +D+  +IS LIQ+VEK RLLKCV  +QE+S N        S++SVP VPQSP+
Sbjct: 256 VVGETQAIDSSKSISTLIQYVEKGRLLKCVGKVQEMSLNSVFTGKDSSASSVPSVPQSPM 315

Query: 334 GVLDAVCFSYRSDDTNA--GGSCSSSHNNSPDAKRRKLNKTCGEELL 468
           GVLD +CFSY+SDDTNA  GGSCSSSH++SPDAKRRKLNKTCG ELL
Sbjct: 316 GVLDTLCFSYKSDDTNAGGGGSCSSSHSSSPDAKRRKLNKTCGSELL 362


>ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 357

 Score =  195 bits (496), Expect = 4e-48
 Identities = 105/163 (64%), Positives = 118/163 (72%), Gaps = 10/163 (6%)
 Frame = +1

Query: 1   MQAITPFSFIDYFLHKINDDXXXXXXXXXXXXXXXXXXXKGIDFLEFKPSEIAAAVAMCV 180
           MQAITPFSFID+FL+KINDD                   +GIDFLEF+PSEIAAAVA+ V
Sbjct: 195 MQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSEIAAAVAISV 254

Query: 181 VGETQTVDTGNTISILIQHVEKERLLKCVKMIQELSSNS----------SASVPCVPQSP 330
           VGE QTV T   IS+LIQ VEKER+LKCVK+IQEL+SNS          S SVP VPQSP
Sbjct: 255 VGEGQTVQTEKAISVLIQLVEKERVLKCVKLIQELASNSGGGSAKGDSASVSVPSVPQSP 314

Query: 331 IGVLDAVCFSYRSDDTNAGGSCSSSHNNSPDAKRRKLNKTCGE 459
           IGVL+  CFSY+SDDTNA    ++SHNNSPDAKRRKLNKT GE
Sbjct: 315 IGVLNTECFSYKSDDTNAASCANTSHNNSPDAKRRKLNKTFGE 357


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