BLASTX nr result

ID: Glycyrrhiza24_contig00021882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021882
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592180.1| ABC transporter G family member [Medicago tr...   225   3e-57
ref|XP_003556131.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   219   2e-55
emb|CBI22616.3| unnamed protein product [Vitis vinifera]              209   1e-52
ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8...   209   1e-52
ref|XP_002329680.1| white-brown-complex ABC transporter family [...   206   2e-51

>ref|XP_003592180.1| ABC transporter G family member [Medicago truncatula]
           gi|355481228|gb|AES62431.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 610

 Score =  225 bits (574), Expect = 3e-57
 Identities = 125/160 (78%), Positives = 131/160 (81%), Gaps = 1/160 (0%)
 Frame = -3

Query: 478 AIVGPSGAGKSTLLDILSARRXXXXXXXXXXXXXXXXS-IFRKLSSYVPQHDACLPLLTV 302
           AIVGPSGAGKSTLLDILSARR                   FRKLS+YVPQHDACLP+LTV
Sbjct: 65  AIVGPSGAGKSTLLDILSARRLPLSGTLSLNSSPITNPSTFRKLSAYVPQHDACLPMLTV 124

Query: 301 SETFAFSAQLLRPKTKTSSGDVATIVSSLLNELRLTHLANTRLAHGLSGGERRRVSIGLS 122
           SETFAFSA LL+PKT     D+A IVSSLLNELRLTHLANTRL HGLSGGERRRVSIGLS
Sbjct: 125 SETFAFSASLLKPKTI----DIAAIVSSLLNELRLTHLANTRLNHGLSGGERRRVSIGLS 180

Query: 121 LLHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRHRTI 2
           LLHDPAVLLLDEPTSGLDS+SAFKVMQ LKSTCVS +RTI
Sbjct: 181 LLHDPAVLLLDEPTSGLDSSSAFKVMQTLKSTCVSYNRTI 220


>ref|XP_003556131.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           8-like [Glycine max]
          Length = 601

 Score =  219 bits (558), Expect = 2e-55
 Identities = 118/159 (74%), Positives = 130/159 (81%)
 Frame = -3

Query: 478 AIVGPSGAGKSTLLDILSARRXXXXXXXXXXXXXXXXSIFRKLSSYVPQHDACLPLLTVS 299
           A+VGPSGAGKSTLLDIL+AR                 S FRKLSSYVPQHD CLPLLTVS
Sbjct: 64  AVVGPSGAGKSTLLDILAARTLPSHGTLLLNSAPLVPSTFRKLSSYVPQHDHCLPLLTVS 123

Query: 298 ETFAFSAQLLRPKTKTSSGDVATIVSSLLNELRLTHLANTRLAHGLSGGERRRVSIGLSL 119
           ETF F+A+LL+PKT     ++A  VSSLL+ELRLTHL+NTRLAHGLSGGERRRVSIGLSL
Sbjct: 124 ETFLFAAKLLKPKTS----NLAATVSSLLSELRLTHLSNTRLAHGLSGGERRRVSIGLSL 179

Query: 118 LHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRHRTI 2
           LHDPAVLLLDEPTSGLDSTSAFKVM+ILK TC +R+RTI
Sbjct: 180 LHDPAVLLLDEPTSGLDSTSAFKVMRILKQTCTTRNRTI 218


>emb|CBI22616.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  209 bits (533), Expect = 1e-52
 Identities = 116/159 (72%), Positives = 125/159 (78%)
 Frame = -3

Query: 478 AIVGPSGAGKSTLLDILSARRXXXXXXXXXXXXXXXXSIFRKLSSYVPQHDACLPLLTVS 299
           AIVGPSGAGKSTLLDIL+AR                 S FRKLS+YVPQHDACLP LTVS
Sbjct: 74  AIVGPSGAGKSTLLDILAARTSPTSGSLLLNSSPLNRSSFRKLSAYVPQHDACLPQLTVS 133

Query: 298 ETFAFSAQLLRPKTKTSSGDVATIVSSLLNELRLTHLANTRLAHGLSGGERRRVSIGLSL 119
           ETFAF+A LL PK    S  +A IV+SLL+ELRLTHLA+TRLAHGLSGGERRRVSIGLSL
Sbjct: 134 ETFAFAASLLVPK----SSKIAIIVASLLSELRLTHLAHTRLAHGLSGGERRRVSIGLSL 189

Query: 118 LHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRHRTI 2
           LHDPAVLLLDEPTSGLDS SAF VMQ L+S   SRHRT+
Sbjct: 190 LHDPAVLLLDEPTSGLDSNSAFNVMQTLQSIAQSRHRTV 228


>ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8-like [Vitis vinifera]
          Length = 597

 Score =  209 bits (533), Expect = 1e-52
 Identities = 116/159 (72%), Positives = 125/159 (78%)
 Frame = -3

Query: 478 AIVGPSGAGKSTLLDILSARRXXXXXXXXXXXXXXXXSIFRKLSSYVPQHDACLPLLTVS 299
           AIVGPSGAGKSTLLDIL+AR                 S FRKLS+YVPQHDACLP LTVS
Sbjct: 66  AIVGPSGAGKSTLLDILAARTSPTSGSLLLNSSPLNRSSFRKLSAYVPQHDACLPQLTVS 125

Query: 298 ETFAFSAQLLRPKTKTSSGDVATIVSSLLNELRLTHLANTRLAHGLSGGERRRVSIGLSL 119
           ETFAF+A LL PK    S  +A IV+SLL+ELRLTHLA+TRLAHGLSGGERRRVSIGLSL
Sbjct: 126 ETFAFAASLLVPK----SSKIAIIVASLLSELRLTHLAHTRLAHGLSGGERRRVSIGLSL 181

Query: 118 LHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRHRTI 2
           LHDPAVLLLDEPTSGLDS SAF VMQ L+S   SRHRT+
Sbjct: 182 LHDPAVLLLDEPTSGLDSNSAFNVMQTLQSIAQSRHRTV 220


>ref|XP_002329680.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222870588|gb|EEF07719.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 593

 Score =  206 bits (524), Expect = 2e-51
 Identities = 112/159 (70%), Positives = 121/159 (76%)
 Frame = -3

Query: 478 AIVGPSGAGKSTLLDILSARRXXXXXXXXXXXXXXXXSIFRKLSSYVPQHDACLPLLTVS 299
           A+VGPSGAGKSTLLDIL+AR                 S FRKLS+YVPQHDACL LLTVS
Sbjct: 62  AVVGPSGAGKSTLLDILAARTSPTSGILLLNSTPINPSSFRKLSAYVPQHDACLQLLTVS 121

Query: 298 ETFAFSAQLLRPKTKTSSGDVATIVSSLLNELRLTHLANTRLAHGLSGGERRRVSIGLSL 119
           ETF F+A+LL PK    S  +ATIV SLLNEL LTHLAN RLAHGLSGGERRRVSIGLSL
Sbjct: 122 ETFTFAARLLNPK----SSQIATIVESLLNELNLTHLANARLAHGLSGGERRRVSIGLSL 177

Query: 118 LHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRHRTI 2
           LHDP +LLLDEPTSGLDS SA  VMQ LKS   SR+RT+
Sbjct: 178 LHDPGILLLDEPTSGLDSKSALNVMQTLKSIATSRYRTV 216


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