BLASTX nr result
ID: Glycyrrhiza24_contig00021847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00021847
(1015 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003520127.1| PREDICTED: uncharacterized protein LOC100819... 335 1e-89
ref|XP_003517858.1| PREDICTED: uncharacterized protein LOC100796... 331 2e-88
ref|XP_003614202.1| RNA polymerase II-associated protein [Medica... 315 1e-83
emb|CBI37806.3| unnamed protein product [Vitis vinifera] 243 5e-62
ref|XP_002278562.1| PREDICTED: uncharacterized protein LOC100258... 243 5e-62
>ref|XP_003520127.1| PREDICTED: uncharacterized protein LOC100819615 [Glycine max]
Length = 1570
Score = 335 bits (859), Expect = 1e-89
Identities = 168/222 (75%), Positives = 182/222 (81%), Gaps = 11/222 (4%)
Frame = +1
Query: 1 ARFNQNKEVILDEKKHLEFLKFQSEIHESYSVFIEDIVEQFSAVSYGDMIFGRQVSLYLH 180
AR NQ+KEVI D+KKHLEFL+FQ+EIHESYS F+E++VEQFSAVSYGD+IFGRQVSLYLH
Sbjct: 1336 ARLNQSKEVISDDKKHLEFLRFQTEIHESYSTFLEELVEQFSAVSYGDVIFGRQVSLYLH 1395
Query: 181 RCVETSIRLAAWNTLSNARVLELLPPLEKCFSSAEGYLEPTEDNDGILEAYTKSWVSDAL 360
RCVETSIRLAAWNTLSN+RVLELLPPLEKCFS AEGYLEP EDN+ ILEAYT WVSDAL
Sbjct: 1396 RCVETSIRLAAWNTLSNSRVLELLPPLEKCFSGAEGYLEPAEDNEAILEAYTNLWVSDAL 1455
Query: 361 DRAAVRESVAYTLVVHHLSSFIFHPCPADKXXXXXXXXXXXXXDYAGKRQHEGMLLNLFC 540
DRAA+R SVAYTLVVHHLSSFIFH CP DK DYAGK+QHEGMLLNL
Sbjct: 1456 DRAAIRGSVAYTLVVHHLSSFIFHACPTDKLLLRNRLARSLLRDYAGKQQHEGMLLNLIH 1515
Query: 541 HNKPPTSDM-----------SWLDSRLKVLTEACEGNSSLLT 633
HNKPP S M SWL+SRLKVL EACEGNSS+LT
Sbjct: 1516 HNKPPPSVMGEELNGILSEKSWLESRLKVLVEACEGNSSILT 1557
>ref|XP_003517858.1| PREDICTED: uncharacterized protein LOC100796310 [Glycine max]
Length = 1614
Score = 331 bits (849), Expect = 2e-88
Identities = 168/222 (75%), Positives = 182/222 (81%), Gaps = 12/222 (5%)
Frame = +1
Query: 1 ARFNQNKEVILDEKKHLEFLKFQSEIHESYSVFIEDIVEQFSAVSYGDMIFGRQVSLYLH 180
AR NQ+KEVI ++KKHLEFL+FQ+EIHESYS F+E++VEQFSAVSYGD+IFGRQVSLYLH
Sbjct: 1379 ARLNQSKEVISNDKKHLEFLRFQTEIHESYSTFLEELVEQFSAVSYGDVIFGRQVSLYLH 1438
Query: 181 RCVETSIRLAAWNTLSNARVLELLPPLEKCFSSAEGYLEPTEDNDGILEAYTKSWVSDAL 360
R VETSIRLAAWNTLSNARVLELLPPLEKCFS AEGYLEP EDN+ ILEAYTKSWVSDAL
Sbjct: 1439 RYVETSIRLAAWNTLSNARVLELLPPLEKCFSGAEGYLEPAEDNEAILEAYTKSWVSDAL 1498
Query: 361 DRAAVRESVAYTLVVHHLSSFIFHPCPADKXXXXXXXXXXXXXDYAGKRQHEGMLLNLFC 540
DRAA+R SVAYTLVVHHLSSFIFH CP DK DYAGK+QHEGMLLNL
Sbjct: 1499 DRAAIRGSVAYTLVVHHLSSFIFHACPMDKLLLRNRLARSLLRDYAGKQQHEGMLLNLIH 1558
Query: 541 HNKPPTSDM------------SWLDSRLKVLTEACEGNSSLL 630
HNKPP S M +WL+SRLKVL EACEGNSSLL
Sbjct: 1559 HNKPPPSVMGEELNGGVLSERNWLESRLKVLVEACEGNSSLL 1600
>ref|XP_003614202.1| RNA polymerase II-associated protein [Medicago truncatula]
gi|355515537|gb|AES97160.1| RNA polymerase II-associated
protein [Medicago truncatula]
Length = 1563
Score = 315 bits (807), Expect = 1e-83
Identities = 154/220 (70%), Positives = 177/220 (80%), Gaps = 11/220 (5%)
Frame = +1
Query: 4 RFNQNKEVILDEKKHLEFLKFQSEIHESYSVFIEDIVEQFSAVSYGDMIFGRQVSLYLHR 183
RFNQNKE I D+KKH+EFL+F+S+IHESYS FIE++VEQFS++SYGD+IFGRQVS+YLH
Sbjct: 1329 RFNQNKEAISDDKKHIEFLRFKSDIHESYSTFIEELVEQFSSISYGDLIFGRQVSVYLHC 1388
Query: 184 CVETSIRLAAWNTLSNARVLELLPPLEKCFSSAEGYLEPTEDNDGILEAYTKSWVSDALD 363
CVE+SIRLA WNTLSNARVLELLPPLEKCFS AEGYLEP EDN+ ILEAY KSWVSDALD
Sbjct: 1389 CVESSIRLATWNTLSNARVLELLPPLEKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALD 1448
Query: 364 RAAVRESVAYTLVVHHLSSFIFHPCPADKXXXXXXXXXXXXXDYAGKRQHEGMLLNLFCH 543
RA +R SV+YT+ VHHLSSFIF+ CP DK DYAGK+QHEGML+NL H
Sbjct: 1449 RAEIRGSVSYTMAVHHLSSFIFNACPVDKLLLRNNLVRSLLRDYAGKQQHEGMLMNLISH 1508
Query: 544 NKPPTSDM-----------SWLDSRLKVLTEACEGNSSLL 630
N+ TS+M SWL+SR+KVL EACEGNSSLL
Sbjct: 1509 NRQSTSNMDEQLDGLLHEESWLESRMKVLIEACEGNSSLL 1548
>emb|CBI37806.3| unnamed protein product [Vitis vinifera]
Length = 1505
Score = 243 bits (620), Expect = 5e-62
Identities = 124/204 (60%), Positives = 149/204 (73%), Gaps = 6/204 (2%)
Frame = +1
Query: 37 EKKHLEFLKFQSEIHESYSVFIEDIVEQFSAVSYGDMIFGRQVSLYLHRCVETSIRLAAW 216
EK +EFL+FQS+IHESYS FIE +VEQF+A+SYGD+I+GRQV++YLHR VE +RLAAW
Sbjct: 1288 EKNSIEFLRFQSDIHESYSTFIETLVEQFAAISYGDLIYGRQVAIYLHRSVEAPVRLAAW 1347
Query: 217 NTLSNARVLELLPPLEKCFSSAEGYLEPTEDNDGILEAYTKSWVSDALDRAAVRESVAYT 396
N LSNARVLELLPPLEKC + AEGYLEP E+N+GILEAY KSWV+ ALDRAA R SV +T
Sbjct: 1348 NALSNARVLELLPPLEKCSADAEGYLEPVENNEGILEAYVKSWVTGALDRAATRGSVTFT 1407
Query: 397 LVVHHLSSFIFHPCPADKXXXXXXXXXXXXXDYAGKRQHEGMLLNLFCHNKPPTSDM-SW 573
LV+HHLSS IF K DY+ KRQHEG++L L +NK S W
Sbjct: 1408 LVLHHLSSVIFEDDADVKLSLRNKLAKSLLRDYSRKRQHEGLMLQLLRYNKQFASPQPEW 1467
Query: 574 L-----DSRLKVLTEACEGNSSLL 630
+ + R + LTEACEGN+SLL
Sbjct: 1468 MKEGETEKRFRFLTEACEGNASLL 1491
>ref|XP_002278562.1| PREDICTED: uncharacterized protein LOC100258889 [Vitis vinifera]
Length = 1602
Score = 243 bits (620), Expect = 5e-62
Identities = 124/204 (60%), Positives = 149/204 (73%), Gaps = 6/204 (2%)
Frame = +1
Query: 37 EKKHLEFLKFQSEIHESYSVFIEDIVEQFSAVSYGDMIFGRQVSLYLHRCVETSIRLAAW 216
EK +EFL+FQS+IHESYS FIE +VEQF+A+SYGD+I+GRQV++YLHR VE +RLAAW
Sbjct: 1385 EKNSIEFLRFQSDIHESYSTFIETLVEQFAAISYGDLIYGRQVAIYLHRSVEAPVRLAAW 1444
Query: 217 NTLSNARVLELLPPLEKCFSSAEGYLEPTEDNDGILEAYTKSWVSDALDRAAVRESVAYT 396
N LSNARVLELLPPLEKC + AEGYLEP E+N+GILEAY KSWV+ ALDRAA R SV +T
Sbjct: 1445 NALSNARVLELLPPLEKCSADAEGYLEPVENNEGILEAYVKSWVTGALDRAATRGSVTFT 1504
Query: 397 LVVHHLSSFIFHPCPADKXXXXXXXXXXXXXDYAGKRQHEGMLLNLFCHNKPPTSDM-SW 573
LV+HHLSS IF K DY+ KRQHEG++L L +NK S W
Sbjct: 1505 LVLHHLSSVIFEDDADVKLSLRNKLAKSLLRDYSRKRQHEGLMLQLLRYNKQFASPQPEW 1564
Query: 574 L-----DSRLKVLTEACEGNSSLL 630
+ + R + LTEACEGN+SLL
Sbjct: 1565 MKEGETEKRFRFLTEACEGNASLL 1588