BLASTX nr result

ID: Glycyrrhiza24_contig00021840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021840
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626173.1| DNA polymerase III polC-type [Medicago trunc...   195   7e-48
ref|XP_003626172.1| DNA polymerase III polC-type [Medicago trunc...   195   7e-48
ref|XP_003626171.1| DNA polymerase III polC-type [Medicago trunc...   195   7e-48
ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like...   168   9e-40
ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like...   167   2e-39

>ref|XP_003626173.1| DNA polymerase III polC-type [Medicago truncatula]
           gi|355501188|gb|AES82391.1| DNA polymerase III polC-type
           [Medicago truncatula]
          Length = 192

 Score =  195 bits (496), Expect = 7e-48
 Identities = 99/144 (68%), Positives = 105/144 (72%)
 Frame = +2

Query: 293 MKTGSMIFSLLQVPRCRIHSLANNWGETFHXXXXXXXXXXXXXXXXXKIYGLQGGHRKKW 472
           MKTGSMIFS LQVPRCR+HSLANN G+TFH                 +IYGLQGGHRKKW
Sbjct: 1   MKTGSMIFSFLQVPRCRLHSLANNCGQTFHSFSNICENNSSVRLLGSRIYGLQGGHRKKW 60

Query: 473 TRRPITTNTEDNGSTKSRSTKQXXXXXXXXXXXXVNVNKTQLGQFQEVQYCDTQQEISQN 652
           TRRPITTNTE +  TKSRSTKQ            VNV KTQLGQF E+QYCD  QEI+QN
Sbjct: 61  TRRPITTNTEGSAGTKSRSTKQEILSETISTSSTVNVKKTQLGQFPEIQYCDIHQEIAQN 120

Query: 653 KDLSSLVTVIVFDIETTGLSRENE 724
           KDLSSLVTVIVFDIETTG SRENE
Sbjct: 121 KDLSSLVTVIVFDIETTGFSRENE 144


>ref|XP_003626172.1| DNA polymerase III polC-type [Medicago truncatula]
           gi|355501187|gb|AES82390.1| DNA polymerase III polC-type
           [Medicago truncatula]
          Length = 266

 Score =  195 bits (496), Expect = 7e-48
 Identities = 99/144 (68%), Positives = 105/144 (72%)
 Frame = +2

Query: 293 MKTGSMIFSLLQVPRCRIHSLANNWGETFHXXXXXXXXXXXXXXXXXKIYGLQGGHRKKW 472
           MKTGSMIFS LQVPRCR+HSLANN G+TFH                 +IYGLQGGHRKKW
Sbjct: 1   MKTGSMIFSFLQVPRCRLHSLANNCGQTFHSFSNICENNSSVRLLGSRIYGLQGGHRKKW 60

Query: 473 TRRPITTNTEDNGSTKSRSTKQXXXXXXXXXXXXVNVNKTQLGQFQEVQYCDTQQEISQN 652
           TRRPITTNTE +  TKSRSTKQ            VNV KTQLGQF E+QYCD  QEI+QN
Sbjct: 61  TRRPITTNTEGSAGTKSRSTKQEILSETISTSSTVNVKKTQLGQFPEIQYCDIHQEIAQN 120

Query: 653 KDLSSLVTVIVFDIETTGLSRENE 724
           KDLSSLVTVIVFDIETTG SRENE
Sbjct: 121 KDLSSLVTVIVFDIETTGFSRENE 144


>ref|XP_003626171.1| DNA polymerase III polC-type [Medicago truncatula]
           gi|355501186|gb|AES82389.1| DNA polymerase III polC-type
           [Medicago truncatula]
          Length = 332

 Score =  195 bits (496), Expect = 7e-48
 Identities = 99/144 (68%), Positives = 105/144 (72%)
 Frame = +2

Query: 293 MKTGSMIFSLLQVPRCRIHSLANNWGETFHXXXXXXXXXXXXXXXXXKIYGLQGGHRKKW 472
           MKTGSMIFS LQVPRCR+HSLANN G+TFH                 +IYGLQGGHRKKW
Sbjct: 1   MKTGSMIFSFLQVPRCRLHSLANNCGQTFHSFSNICENNSSVRLLGSRIYGLQGGHRKKW 60

Query: 473 TRRPITTNTEDNGSTKSRSTKQXXXXXXXXXXXXVNVNKTQLGQFQEVQYCDTQQEISQN 652
           TRRPITTNTE +  TKSRSTKQ            VNV KTQLGQF E+QYCD  QEI+QN
Sbjct: 61  TRRPITTNTEGSAGTKSRSTKQEILSETISTSSTVNVKKTQLGQFPEIQYCDIHQEIAQN 120

Query: 653 KDLSSLVTVIVFDIETTGLSRENE 724
           KDLSSLVTVIVFDIETTG SRENE
Sbjct: 121 KDLSSLVTVIVFDIETTGFSRENE 144


>ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  168 bits (426), Expect = 9e-40
 Identities = 92/144 (63%), Positives = 97/144 (67%)
 Frame = +2

Query: 293 MKTGSMIFSLLQVPRCRIHSLANNWGETFHXXXXXXXXXXXXXXXXXKIYGLQGGHRKKW 472
           MKTGSMIFSL  VPRCRI SLAN WGETFH                 +IYGLQGG RKKW
Sbjct: 1   MKTGSMIFSLFHVPRCRIQSLANCWGETFHGFSTTCGNNSSIRLLGSRIYGLQGGQRKKW 60

Query: 473 TRRPITTNTEDNGSTKSRSTKQXXXXXXXXXXXXVNVNKTQLGQFQEVQYCDTQQEISQN 652
           TR PITTNTE  GSTKS+S K              NVNKTQL Q QE+Q CD QQEI++N
Sbjct: 61  TR-PITTNTEGKGSTKSKSIKHEILSETILANATANVNKTQLDQSQEIQDCDIQQEIAEN 119

Query: 653 KDLSSLVTVIVFDIETTGLSRENE 724
           KDLSS  TVIVFDIETTG SRENE
Sbjct: 120 KDLSS-YTVIVFDIETTGFSRENE 142


>ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  167 bits (423), Expect = 2e-39
 Identities = 92/144 (63%), Positives = 98/144 (68%)
 Frame = +2

Query: 293 MKTGSMIFSLLQVPRCRIHSLANNWGETFHXXXXXXXXXXXXXXXXXKIYGLQGGHRKKW 472
           MKTGSMIFSLL VPR RI SLAN WGETFH                 +IYGLQGG RKKW
Sbjct: 1   MKTGSMIFSLLHVPRFRIQSLANCWGETFHSFSTTCGNNSNVRLLGSRIYGLQGGQRKKW 60

Query: 473 TRRPITTNTEDNGSTKSRSTKQXXXXXXXXXXXXVNVNKTQLGQFQEVQYCDTQQEISQN 652
           TR PITTN E  GSTKS+S K             VNVNKTQL + QE+QYCD QQEI++N
Sbjct: 61  TR-PITTNIEGKGSTKSKSIKHEILSETILANATVNVNKTQLDKSQEIQYCDIQQEIAEN 119

Query: 653 KDLSSLVTVIVFDIETTGLSRENE 724
           KDLSS  TVIVFDIETTG SRENE
Sbjct: 120 KDLSS-YTVIVFDIETTGFSRENE 142


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