BLASTX nr result

ID: Glycyrrhiza24_contig00021803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021803
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607467.1| Integrator complex subunit [Medicago truncat...   422   e-116
dbj|BAF98228.1| CM0545.610.nc [Lotus japonicus]                       376   e-102
ref|XP_002532144.1| conserved hypothetical protein [Ricinus comm...   225   9e-57
ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265...   225   9e-57
ref|XP_002324606.1| predicted protein [Populus trichocarpa] gi|2...   210   4e-52

>ref|XP_003607467.1| Integrator complex subunit [Medicago truncatula]
           gi|355508522|gb|AES89664.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 358

 Score =  422 bits (1086), Expect = e-116
 Identities = 215/251 (85%), Positives = 228/251 (90%), Gaps = 4/251 (1%)
 Frame = -1

Query: 878 NRKHKQCKGLLSKARVANHSELLKRVKSVFNSGDSVSKALALVLFGCWADFANDNAQIRY 699
           NRKHKQCKGLLS ARVANH ELLK+VKSVFNSGDS SKALALVLFGCWADFANDNAQIRY
Sbjct: 102 NRKHKQCKGLLSVARVANHLELLKQVKSVFNSGDSESKALALVLFGCWADFANDNAQIRY 161

Query: 698 LILSSLVSPHDCEVRASLFAVGCFCEISDDFACITLEMLFNMMNSPAVSLPIKLAAAQVF 519
           LILS+LVSPHD E +ASLFA GCFCEISDDFACITLEMLFNMMNSP VSLPIKLAAA+VF
Sbjct: 162 LILSTLVSPHDSEAKASLFAAGCFCEISDDFACITLEMLFNMMNSPEVSLPIKLAAARVF 221

Query: 518 AKFKCSYSVANKAYKIGLELISNSSNEDILVAMLFSLSKLASVATLLTSNQVEFLVSFLE 339
           AKFKCSYSVA KAYKIGL+LISNSSNEDILV MLFSLSKLA+++TLLTSN V FLVSFLE
Sbjct: 222 AKFKCSYSVAKKAYKIGLDLISNSSNEDILVIMLFSLSKLATISTLLTSNHVNFLVSFLE 281

Query: 338 RQLASHVQETALRCIHFLLRNNPGLKLYCSTSFEVPDGQTLEHSPSLYQAWK----DDEI 171
            QL SHVQETALRCIHFL RNNP LKLYC+TSFEVPDGQ L+ SPS Y+ WK    DDE+
Sbjct: 282 GQLTSHVQETALRCIHFLFRNNPSLKLYCNTSFEVPDGQPLDLSPSEYETWKGDWTDDEM 341

Query: 170 VDLNKLLSDSE 138
           V+LNKLLSDSE
Sbjct: 342 VELNKLLSDSE 352


>dbj|BAF98228.1| CM0545.610.nc [Lotus japonicus]
          Length = 329

 Score =  376 bits (965), Expect = e-102
 Identities = 185/226 (81%), Positives = 209/226 (92%)
 Frame = -1

Query: 878 NRKHKQCKGLLSKARVANHSELLKRVKSVFNSGDSVSKALALVLFGCWADFANDNAQIRY 699
           N KHKQCKGLLSKARVANH E+LKRVKSVF +GDS  KALALVLFGCWADFANDNAQIRY
Sbjct: 102 NGKHKQCKGLLSKARVANHLEMLKRVKSVFQNGDSECKALALVLFGCWADFANDNAQIRY 161

Query: 698 LILSSLVSPHDCEVRASLFAVGCFCEISDDFACITLEMLFNMMNSPAVSLPIKLAAAQVF 519
           LILSSLVS HDCEV ASLFA GCFCEISDDFACITLEMLFNM+N+PAVSLPIKLAA +VF
Sbjct: 162 LILSSLVSTHDCEVIASLFAAGCFCEISDDFACITLEMLFNMVNTPAVSLPIKLAAVRVF 221

Query: 518 AKFKCSYSVANKAYKIGLELISNSSNEDILVAMLFSLSKLASVATLLTSNQVEFLVSFLE 339
           AKFKCS SVA+KAYK+ L+LI NSSNED+LVAMLFSLSKLASV+T+L SN+V+FL+SF++
Sbjct: 222 AKFKCSDSVASKAYKVCLQLILNSSNEDLLVAMLFSLSKLASVSTVLASNEVDFLLSFVK 281

Query: 338 RQLASHVQETALRCIHFLLRNNPGLKLYCSTSFEVPDGQTLEHSPS 201
           R++ASHVQETA +CIH+LL+NNP LKLYC+ SFE+PDGQTL+H PS
Sbjct: 282 REVASHVQETASKCIHYLLKNNPALKLYCNASFELPDGQTLQHPPS 327


>ref|XP_002532144.1| conserved hypothetical protein [Ricinus communis]
           gi|223528180|gb|EEF30243.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1166

 Score =  225 bits (574), Expect = 9e-57
 Identities = 119/197 (60%), Positives = 146/197 (74%)
 Frame = -1

Query: 875 RKHKQCKGLLSKARVANHSELLKRVKSVFNSGDSVSKALALVLFGCWADFANDNAQIRYL 696
           +K ++ +G+LSK R+ NH ELLKRVK V+++GD  S+A+ALVLFGCWADFA D+A IRYL
Sbjct: 104 KKGRRYEGILSKDRIHNHMELLKRVKIVYDTGDVESRAMALVLFGCWADFAKDSAHIRYL 163

Query: 695 ILSSLVSPHDCEVRASLFAVGCFCEISDDFACITLEMLFNMMNSPAVSLPIKLAAAQVFA 516
           ILSSLVS    EV+ASLFA  CFCE++ DFA + LEML N+M SP  SL I+LA  +V A
Sbjct: 164 ILSSLVSSEILEVKASLFAASCFCELAADFAYVVLEMLPNIMLSPDTSLTIRLAGVRVIA 223

Query: 515 KFKCSYSVANKAYKIGLELISNSSNEDILVAMLFSLSKLASVATLLTSNQVEFLVSFLER 336
           K   SYS AN AYKIGL+L+S SS ED LVA+L SLSKLA+ +T L S QV  L SFL  
Sbjct: 224 KMGSSYSTANSAYKIGLKLLSGSSEEDFLVAVLVSLSKLANRSTFLLSEQVNLLWSFLSS 283

Query: 335 QLASHVQETALRCIHFL 285
                +Q TALRC+HF+
Sbjct: 284 GRTLRLQATALRCLHFM 300


>ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265170 [Vitis vinifera]
           gi|296082233|emb|CBI21238.3| unnamed protein product
           [Vitis vinifera]
          Length = 1166

 Score =  225 bits (574), Expect = 9e-57
 Identities = 124/251 (49%), Positives = 165/251 (65%), Gaps = 15/251 (5%)
 Frame = -1

Query: 854 GLLSKARVANHSELLKRVKSVFNSGDSVSKALALVLFGCWADFANDNAQIRYLILSSLVS 675
           G+LSK RV N S+LL RVK VF+SGD  S+AL LVLFGCWADFA D+A+IRY+ILSSLVS
Sbjct: 111 GILSKHRVHNQSQLLSRVKIVFDSGDVQSRALTLVLFGCWADFAKDSAEIRYIILSSLVS 170

Query: 674 PHDCEVRASLFAVGCFCEISDDFACITLEMLFNMMNSPAVSLPIKLAAAQVFAKFKCSYS 495
            H  EVRAS +A  CFCE+SDDFA + LE+L NM++S  +   ++LA  +VFAK  CS S
Sbjct: 171 SHVVEVRASFYAAACFCELSDDFASVILEILVNMLSSSQMMSAVRLAGVRVFAKMGCSSS 230

Query: 494 VANKAYKIGLELISNSSNEDILVAMLFSLSKLASVATLLTSNQVEFLVSFLERQLASHVQ 315
           +A++AYK+GL+L+ +SS E  LVAML SLSKLAS+ + L S QV+ L SFL ++   HV+
Sbjct: 231 LAHRAYKVGLKLLMDSSEEHFLVAMLISLSKLASIFSFLISEQVDLLCSFLTQEKTLHVK 290

Query: 314 ETALRCIHFLLRNN----PGLKLYCSTSFEVPDGQTLE-----------HSPSLYQAWKD 180
             A+RC+HF+   +    P         F + D   L            H  +LY     
Sbjct: 291 AMAIRCLHFIFIRSMCHFPVSAYIVKILFSMLDDPELPSDLQCQALRIFHKIALYSLANG 350

Query: 179 DEIVDLNKLLS 147
            +I++L+KLL+
Sbjct: 351 RDILELDKLLT 361


>ref|XP_002324606.1| predicted protein [Populus trichocarpa] gi|222866040|gb|EEF03171.1|
           predicted protein [Populus trichocarpa]
          Length = 1237

 Score =  210 bits (534), Expect = 4e-52
 Identities = 112/196 (57%), Positives = 143/196 (72%)
 Frame = -1

Query: 872 KHKQCKGLLSKARVANHSELLKRVKSVFNSGDSVSKALALVLFGCWADFANDNAQIRYLI 693
           K +Q +G+LSK RV NH ELLKRVK VF++GD  SKALAL LFGCWA FA D+A IRYLI
Sbjct: 106 KGRQYRGILSKDRVQNHVELLKRVKIVFDTGDVDSKALALALFGCWAPFAKDSAHIRYLI 165

Query: 692 LSSLVSPHDCEVRASLFAVGCFCEISDDFACITLEMLFNMMNSPAVSLPIKLAAAQVFAK 513
           LSS++S    +V+ASLFA GCFCE++ DF  + LEML NM+ S    L I+L   +VFAK
Sbjct: 166 LSSMISSDVLQVQASLFAAGCFCELAGDFVPVVLEMLVNMVTSSETLLTIRLVGTRVFAK 225

Query: 512 FKCSYSVANKAYKIGLELISNSSNEDILVAMLFSLSKLASVATLLTSNQVEFLVSFLERQ 333
              SYSVA++AYK GL+L+ +S  ED++V ML SL+KLAS +TLL   QV+ L+ FL ++
Sbjct: 226 MGPSYSVASRAYKTGLKLL-DSLEEDLVVTMLVSLTKLASKSTLLLLEQVDLLLPFLSQE 284

Query: 332 LASHVQETALRCIHFL 285
                Q TALRC+HF+
Sbjct: 285 KDLLFQATALRCLHFI 300


Top