BLASTX nr result

ID: Glycyrrhiza24_contig00021802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021802
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265566.1| PREDICTED: protein YIPF5 [Vitis vinifera]          85   5e-15
emb|CAN66766.1| hypothetical protein VITISV_026740 [Vitis vinifera]    85   5e-15
ref|XP_002282853.1| PREDICTED: protein YIPF5 homolog isoform 1 [...    77   1e-12
emb|CAN61195.1| hypothetical protein VITISV_028346 [Vitis vinifera]    77   1e-12
ref|XP_002312874.1| predicted protein [Populus trichocarpa] gi|1...    75   4e-12

>ref|XP_002265566.1| PREDICTED: protein YIPF5 [Vitis vinifera]
          Length = 248

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/91 (56%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
 Frame = -1

Query: 248 MSKEFAVPPVVFPTG-------TVQRR-PTAPFQPHPSNNNPIPFMSFDIGS--VTTSFP 99
           MSKEF VPPVVFP G         QRR PTAPFQP    N  IPFMSFD+GS    TSFP
Sbjct: 1   MSKEFNVPPVVFPAGGNPGPAAVAQRRLPTAPFQPPRPANPSIPFMSFDVGSAAAATSFP 60

Query: 98  SPQFGXXXXXXXXXXXXSAANFDEEPPLLEE 6
           +PQFG              +NFD+EPPLLEE
Sbjct: 61  APQFG-------GNTIGIGSNFDDEPPLLEE 84


>emb|CAN66766.1| hypothetical protein VITISV_026740 [Vitis vinifera]
          Length = 200

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/91 (56%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
 Frame = -1

Query: 248 MSKEFAVPPVVFPTG-------TVQRR-PTAPFQPHPSNNNPIPFMSFDIGS--VTTSFP 99
           MSKEF VPPVVFP G         QRR PTAPFQP    N  IPFMSFD+GS    TSFP
Sbjct: 1   MSKEFNVPPVVFPAGGNPGPAAVAQRRLPTAPFQPPRPANPSIPFMSFDVGSAAAATSFP 60

Query: 98  SPQFGXXXXXXXXXXXXSAANFDEEPPLLEE 6
           +PQFG              +NFD+EPPLLEE
Sbjct: 61  APQFG-------GNTIGIGSNFDDEPPLLEE 84


>ref|XP_002282853.1| PREDICTED: protein YIPF5 homolog isoform 1 [Vitis vinifera]
           gi|359481585|ref|XP_003632643.1| PREDICTED: protein
           YIPF5 homolog isoform 2 [Vitis vinifera]
           gi|297740102|emb|CBI30284.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
 Frame = -1

Query: 248 MSKEFAVPPVVFPTG------TVQRR--PTAPFQPHPSNNNPIPFMSFDIGSVTTSFPSP 93
           M+KEFAVPPVVFP+G      ++Q+R  P+APFQP  + N  IPFMSFDIGSVTT+ PSP
Sbjct: 1   MTKEFAVPPVVFPSGGNPSVVSIQKRRVPSAPFQPSRATNPSIPFMSFDIGSVTTASPSP 60

Query: 92  QFGXXXXXXXXXXXXSAANFDEEPPLLEE 6
                           A  F+ E PLL+E
Sbjct: 61  ------ATLYGGPIGGATTFEAEEPLLDE 83


>emb|CAN61195.1| hypothetical protein VITISV_028346 [Vitis vinifera]
          Length = 452

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
 Frame = -1

Query: 248 MSKEFAVPPVVFPTG------TVQRR--PTAPFQPHPSNNNPIPFMSFDIGSVTTSFPSP 93
           M+KEFAVPPVVFP+G      ++Q+R  P+APFQP  + N  IPFMSFDIGSVTT+ PSP
Sbjct: 1   MTKEFAVPPVVFPSGGNPSVVSIQKRRVPSAPFQPSRATNPSIPFMSFDIGSVTTASPSP 60

Query: 92  QFGXXXXXXXXXXXXSAANFDEEPPLLEE 6
                           A  F+ E PLL+E
Sbjct: 61  ------ATLYGGPIGGATTFEAEEPLLDE 83


>ref|XP_002312874.1| predicted protein [Populus trichocarpa] gi|118483530|gb|ABK93663.1|
           unknown [Populus trichocarpa]
           gi|222849282|gb|EEE86829.1| predicted protein [Populus
           trichocarpa]
          Length = 250

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
 Frame = -1

Query: 248 MSKEFAVPPVVFPTG---------TVQRR--PTAPFQPHPSNNNPIPFMSFDIGSVTTSF 102
           MS+EFAVPPVVFP+G          +Q+R  PTAPFQP   +N+ IPFMSF+IGS  T+ 
Sbjct: 1   MSREFAVPPVVFPSGGNPTVATGGNIQQRRVPTAPFQPSRPSNSGIPFMSFEIGSAATNT 60

Query: 101 PSPQFGXXXXXXXXXXXXSAANFDEEPPLLEE 6
             P  G             AANFD+E PLL+E
Sbjct: 61  SGPIGG------GTGPIGGAANFDDEEPLLDE 86


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