BLASTX nr result

ID: Glycyrrhiza24_contig00021797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021797
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596703.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   255   1e-65
ref|XP_003612124.1| F-box family-3 [Medicago truncatula] gi|3555...   250   3e-64
ref|XP_003617561.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   235   1e-59
ref|XP_003627028.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   229   5e-58
ref|XP_003628587.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   215   1e-53

>ref|XP_003596703.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355485751|gb|AES66954.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 457

 Score =  255 bits (651), Expect = 1e-65
 Identities = 147/277 (53%), Positives = 187/277 (67%), Gaps = 4/277 (1%)
 Frame = +1

Query: 55  CPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLELKIGCVDVDSVNTLLSGCPILETLDLTF 234
           C NLVSL LCG I+V ++RSSA  LPSLK L+L IG V+++S++ LLS CPILETL+L+ 
Sbjct: 157 CTNLVSLSLCGDIYVVLERSSAFFLPSLKKLQLDIGYVEMNSMDNLLSSCPILETLELSI 216

Query: 235 YAKFSTKVRIPPLPSLKRLKFKAQMG-KSYLQIDAPDLKYLSIVQREFG---AVGNLQNV 402
                 ++R+PP  SLKRLKF  +    +YL+IDAP LKYLS+V   FG    VGNL  V
Sbjct: 217 SPDRLARLRVPP--SLKRLKFTVENNFGAYLEIDAPGLKYLSLVNITFGDAATVGNLDQV 274

Query: 403 VEAYVDVFPGLREPYDGLREPVDSLLNFLRALSGTKHLLLQRFTTEWLLTAPVLDFPDFR 582
            EAY+DVF           E VD L +  RALS  KHL+L   TT+WL  APV+D  +FR
Sbjct: 275 EEAYLDVFSTPEN------ESVDPLFDLFRALSRIKHLVLCLSTTKWLFAAPVMDLSEFR 328

Query: 583 YLLHLELILPCFNTNFLLNVLQKCHVLQVLIIKSNKYDPSRYPSTSPSLALQSTSVPNCL 762
           YLLHLE+ILP F+ +FLL++L KC +LQ LII+++K      P T   LA ++ +VPNCL
Sbjct: 329 YLLHLEVILPSFSLSFLLSLLHKCPMLQDLIIQNDK---RLAPPTLYGLAAKTKNVPNCL 385

Query: 763 VSHLSSFHFDGYRGFEDELAFAEYIFSNGLVLKTMTI 873
           VSHL+  HF GY+ F  E+ FA Y+  NGLVLKTM I
Sbjct: 386 VSHLNFIHFKGYQTFLHEMEFAAYVLRNGLVLKTMLI 422


>ref|XP_003612124.1| F-box family-3 [Medicago truncatula] gi|355513459|gb|AES95082.1|
           F-box family-3 [Medicago truncatula]
          Length = 452

 Score =  250 bits (639), Expect = 3e-64
 Identities = 153/301 (50%), Positives = 196/301 (65%), Gaps = 8/301 (2%)
 Frame = +1

Query: 22  PSFLIPVALFNCPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLELKIGCVDVDSVNTLLSG 201
           P F +P ALF+CPNLVSL L G +HV +Q S+AV LPSLKML + IG V+V SVN LL G
Sbjct: 145 PDFKLPQALFSCPNLVSLSLSGAVHVSIQHSTAVSLPSLKMLMIDIGYVEVSSVNALLDG 204

Query: 202 CPILETLDLTFYAKFSTKVRIPPLPSLKRLKFKAQMG-KSYLQIDAPDLKYLSIVQREFG 378
           C  +E LDL F A+   KV +P  PSLKRLK   +    +YL+++APDL+YL+I Q  FG
Sbjct: 205 CSSIEILDLGFSAQSLDKVCVP--PSLKRLKITIENDVGAYLEVNAPDLQYLNITQITFG 262

Query: 379 ---AVGNLQNVVEAYVDVFPGLREPYDGLREPVDSLLNFLRALSGTKHLLLQRFTT--EW 543
              ++ +L NVVEAY+DVFP            +  L N   ALSG KHL+L R TT  +W
Sbjct: 263 EGFSLYSLPNVVEAYLDVFP-------TSLGSIVPLHNLFGALSGAKHLMLSRSTTKVKW 315

Query: 544 LLTAP-VLDFPDFRYLLHLELILPCFNTNFLLNVLQKCHVLQVLIIKSNKYDPSRYPSTS 720
           LL  P  + F +F+YL+ LEL+L  FN+N LL+++QKC +LQ LII+++K         S
Sbjct: 316 LLGEPHEMLFQEFQYLIRLELVLSWFNSNSLLHLIQKCPLLQPLIIQNDK-------ERS 368

Query: 721 PSLALQ-STSVPNCLVSHLSSFHFDGYRGFEDELAFAEYIFSNGLVLKTMTIIDFFTSLD 897
           P LA     S+PNCLVSHLS   F G+RGF DE++F EY+  NG VLKT+ I D   SLD
Sbjct: 369 PILAWSPQPSIPNCLVSHLSFIEFKGFRGFPDEVSFVEYVLQNGHVLKTLIIADI--SLD 426

Query: 898 L 900
           L
Sbjct: 427 L 427


>ref|XP_003617561.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355518896|gb|AET00520.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 462

 Score =  235 bits (599), Expect = 1e-59
 Identities = 139/289 (48%), Positives = 188/289 (65%), Gaps = 6/289 (2%)
 Frame = +1

Query: 34   IPVALFNCPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLEL-KIGCVDVDSVNTLLSGCPI 210
            +P++LF+CPNLVSL     I +++Q +S + LPSLK+L+L  +  +D++SVN LLSGCP+
Sbjct: 148  VPLSLFSCPNLVSLSFNDYIILQLQDNSKICLPSLKLLQLLDMYNLDLNSVNALLSGCPV 207

Query: 211  LETLDLTFYAKFSTKVRIPPLPSLKRLKFKAQMGK-SYLQIDAPDLKYLSIVQREF---G 378
            LE L+++F  +    +R+    +LKRLK   +    +YL+IDAPDLKYLS+    F    
Sbjct: 208  LENLEISFAPESLATLRLSS-STLKRLKIDVENEVGAYLEIDAPDLKYLSLTNIMFLNAA 266

Query: 379  AVGNLQNVVEAYVDVFPGLREPYD-GLREPVDSLLNFLRALSGTKHLLLQRFTTEWLLTA 555
            +VGNL NV EA++DVF   R P      E V+ +L  L+ALSG KHL L   TT+WL  A
Sbjct: 267  SVGNLHNVEEAHLDVFSTHRAPSSPSTSESVEPVLRLLQALSGIKHLKLLSSTTKWLFAA 326

Query: 556  PVLDFPDFRYLLHLELILPCFNTNFLLNVLQKCHVLQVLIIKSNKYDPSRYPSTSPSLAL 735
            PVLDFP+F +LL+LEL L  FN++FL+++LQKC VLQ LI  ++K  PS   S S    +
Sbjct: 327  PVLDFPEFCHLLYLELWLLSFNSSFLIDMLQKCPVLQTLITFNDKMHPSYDSSPSYGWEV 386

Query: 736  QSTSVPNCLVSHLSSFHFDGYRGFEDELAFAEYIFSNGLVLKTMTIIDF 882
            +  SVP CLVSHL+      Y G  +EL F  Y+  NGLVLKTM I  F
Sbjct: 387  KPKSVPKCLVSHLTFIDLQRYLGNSNELEFTSYVLQNGLVLKTMLISGF 435


>ref|XP_003627028.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355521050|gb|AET01504.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 451

 Score =  229 bits (585), Expect = 5e-58
 Identities = 143/292 (48%), Positives = 185/292 (63%), Gaps = 7/292 (2%)
 Frame = +1

Query: 22  PSFLIPVALFNCPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLELKI-GCVDVDSVNTLLS 198
           P F +P++LF CPNLVSL +CGGIH+ VQ ++ + LPSLKML + + G V+V  VN LL 
Sbjct: 142 PDFKLPLSLFTCPNLVSLSICGGIHLDVQSTTPISLPSLKMLLIDVLGNVEVAFVNALLY 201

Query: 199 GCPILETLDLTFYAKFSTKVRIPPLPSLKRLKFKAQMG-KSYLQIDAPDLKYLSIVQREF 375
           GCP +E LDL F +     V +P   SLKRLK +      S L+I+APDL+YL+I Q +F
Sbjct: 202 GCPNIEALDLHFLSDSLENVCLPA--SLKRLKIQIDNDFGSSLEINAPDLEYLNIYQHKF 259

Query: 376 GAV---GNLQNVVEAYVDVFPGLREPYDGLREPVDSLLNFLRALSGTKHLLLQRFTTEWL 546
             V    +  NVVEA +D+FP     Y+     VD LL  L  LS TKHL+L   TT+WL
Sbjct: 260 IDVLSMNSFHNVVEASLDLFPF---SYNF----VDPLLKLLNTLSRTKHLVLSGSTTKWL 312

Query: 547 LTAPV-LDFPDFRYLLHLELILPCFNTNFLLNVLQKCHVLQVLIIKSNKYDPSRYPSTSP 723
           L  P  L F +FRYLLHLELILP FN+N+LL++LQKC VLQVL I++ +  P       P
Sbjct: 313 LGEPRDLFFQEFRYLLHLELILPWFNSNYLLSLLQKCPVLQVLKIQNKEQSP-------P 365

Query: 724 SLA-LQSTSVPNCLVSHLSSFHFDGYRGFEDELAFAEYIFSNGLVLKTMTII 876
            L      + P CLVSHL+   F G+ G  DE++F E++   GLVLKT+ II
Sbjct: 366 ILGWAPQPNAPKCLVSHLTFIQFKGFLGLPDEVSFVEHVLQEGLVLKTIMII 417


>ref|XP_003628587.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355522609|gb|AET03063.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 454

 Score =  215 bits (547), Expect = 1e-53
 Identities = 135/292 (46%), Positives = 182/292 (62%), Gaps = 8/292 (2%)
 Frame = +1

Query: 34  IPVALFNCPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLEL-KIGCVDVDSVNTLLSGCPI 210
           +P  LF+C NL+SL L G I + +Q    + LPSLK+L+L  +  +++ S++ LLS CP+
Sbjct: 147 LPPTLFSCSNLISLSLSGYILLPLQDPLEICLPSLKVLQLLNMHHLNLSSMHILLSACPV 206

Query: 211 LETLDLTFYAKFSTKVRIPPLPSLKRLKFKAQMGK-SYLQIDAPDLKYLS---IVQREFG 378
           LE L+L F  +    +R+P   SLKRLK        ++L+IDAP LKYLS   I  R+  
Sbjct: 207 LENLELFFSPESLDIIRVPS--SLKRLKITVDNNVGAWLEIDAPGLKYLSLECITFRDAA 264

Query: 379 AVGNLQNVVEAYVDVFPGLREPYDGLREPVDSLLNFLRALSGTKHLLLQRFTTEWLLTAP 558
           AVGNL +V EAY+DVFP  +       E V+ LLN LRALSG KHL L   TT+WL  AP
Sbjct: 265 AVGNLHSVEEAYLDVFPTPKS------ESVEPLLNLLRALSGIKHLELHNSTTKWLFAAP 318

Query: 559 VLDFPDFRYLLHLELILPCFNTNFLLNVLQKCHVLQVLIIKSNKYD-PSRYPSTSPSLAL 735
           +L+FP+F YLLHL+L  P FN+ FL +VLQKC +L+ LI      D   R   + PS   
Sbjct: 319 ILNFPEFHYLLHLKLEYPPFNSTFLFDVLQKCPMLETLIAFMFDIDMVDRSYDSLPSYRW 378

Query: 736 QS--TSVPNCLVSHLSSFHFDGYRGFEDELAFAEYIFSNGLVLKTMTIIDFF 885
           ++   SVP CL+SHL+  HF G    E+EL F  Y+  +GLVLKTM I +++
Sbjct: 379 EAKPKSVPKCLISHLTFIHFYGVP--ENELEFIGYVLQHGLVLKTMIIDEYW 428


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