BLASTX nr result

ID: Glycyrrhiza24_contig00021754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021754
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47893.1| unknown [Medicago truncatula]                          226   3e-57
ref|NP_001238471.1| uncharacterized protein LOC100527597 [Glycin...   190   1e-46
ref|XP_004137247.1| PREDICTED: mitochondrial inner membrane prot...   184   1e-44
ref|XP_002300443.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_002300441.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41

>gb|AFK47893.1| unknown [Medicago truncatula]
          Length = 166

 Score =  226 bits (575), Expect = 3e-57
 Identities = 110/177 (62%), Positives = 127/177 (71%)
 Frame = -3

Query: 600 KFLCWLHFVDNYLFSPTHVNGPSMLPTINIAGDVILAEFLSPRLGNLGHGDLVLVRSPLN 421
           KFLC+LHF  NYL SPTH  GPSMLPT+NIAGDV+L E +SPR+G +GHGDLVLV+SPLN
Sbjct: 26  KFLCYLHFTGNYLCSPTHAYGPSMLPTLNIAGDVVLVEHVSPRIGKVGHGDLVLVKSPLN 85

Query: 420 PNRRLTKRIVAMEGDTVTYFNPLNADAAQTAVVXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
           PNR LTKR+VAMEGDTVTYF+PLN++ ++ AV                            
Sbjct: 86  PNRNLTKRVVAMEGDTVTYFDPLNSEDSRIAV---------------------------- 117

Query: 240 XXXXXXXXVPKGHVWIQGDNIYASRDSRHYGPVPYGLIQGKLFFRVWPLDSFGLLDN 70
                   VPKGHVWIQGDN+YASRDSRH+GPVPYGLI+GK+FFRVWP  SFG LDN
Sbjct: 118 --------VPKGHVWIQGDNVYASRDSRHFGPVPYGLIRGKVFFRVWPPSSFGRLDN 166


>ref|NP_001238471.1| uncharacterized protein LOC100527597 [Glycine max]
           gi|255632719|gb|ACU16711.1| unknown [Glycine max]
          Length = 118

 Score =  190 bits (483), Expect = 1e-46
 Identities = 96/152 (63%), Positives = 110/152 (72%)
 Frame = -3

Query: 531 MLPTINIAGDVILAEFLSPRLGNLGHGDLVLVRSPLNPNRRLTKRIVAMEGDTVTYFNPL 352
           MLPT+N+AGDV+LA+ LSPRLGN+GHGDLVLVRSPLNP  RLTKR+VA+EGDTVTYF+PL
Sbjct: 1   MLPTLNVAGDVLLADHLSPRLGNIGHGDLVLVRSPLNPKIRLTKRVVAVEGDTVTYFDPL 60

Query: 351 NADAAQTAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPKGHVWIQGDNIYA 172
           +++AAQ AV                                    VPKGHVWIQGDNIYA
Sbjct: 61  HSEAAQVAV------------------------------------VPKGHVWIQGDNIYA 84

Query: 171 SRDSRHYGPVPYGLIQGKLFFRVWPLDSFGLL 76
           SRDSRH+GPVPYGLI+GK+FFRVWP DSFG L
Sbjct: 85  SRDSRHFGPVPYGLIEGKVFFRVWPPDSFGPL 116


>ref|XP_004137247.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           [Cucumis sativus] gi|449483132|ref|XP_004156501.1|
           PREDICTED: mitochondrial inner membrane protease subunit
           1-like [Cucumis sativus]
          Length = 161

 Score =  184 bits (467), Expect = 1e-44
 Identities = 95/177 (53%), Positives = 115/177 (64%), Gaps = 1/177 (0%)
 Frame = -3

Query: 600 KFLCWLHFVDNYLFSPTHVNGPSMLPTINIAGDVILAEFLSPRLGNLGHGDLVLVRSPLN 421
           KFLC LH  +NY+ SPT V GPSMLPT+N+ GDV+LAE +S R+G +G GD+VLVRSP N
Sbjct: 20  KFLCLLHVTNNYICSPTLVYGPSMLPTLNLTGDVLLAEHVSHRVGRVGPGDVVLVRSPRN 79

Query: 420 PNRRLTKRIVAMEGDTVTYF-NPLNADAAQTAVVXXXXXXXXXXXXXXXXXXXXXXXXXX 244
           P + LTKRIV +EGD V ++ +P N++  Q+AV                           
Sbjct: 80  PRKMLTKRIVGVEGDKVNFYPDPANSNQYQSAV--------------------------- 112

Query: 243 XXXXXXXXXVPKGHVWIQGDNIYASRDSRHYGPVPYGLIQGKLFFRVWPLDSFGLLD 73
                    VPKGHVWIQGDN+YASRDSRH+GPVPYGLI+GK F RVWP D FG LD
Sbjct: 113 ---------VPKGHVWIQGDNVYASRDSRHFGPVPYGLIEGKAFLRVWPPDCFGRLD 160


>ref|XP_002300443.1| predicted protein [Populus trichocarpa] gi|222847701|gb|EEE85248.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  171 bits (434), Expect = 7e-41
 Identities = 89/174 (51%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
 Frame = -3

Query: 600 KFLCWLHFVDNYLFSPTHVNGPSMLPTINIAGDVILAEFLSPRLGNLGHGDLVLVRSPLN 421
           KFL +LH  +NYL SPT V GPSMLPT+N+ GDV+L E +S R   +G GD+VLVRSPL+
Sbjct: 23  KFLGFLHLTNNYLISPTLVYGPSMLPTLNLTGDVLLVEHVSHRFQKVGPGDVVLVRSPLD 82

Query: 420 PNRRLTKRIVAMEGDTVTYF-NPLNADAAQTAVVXXXXXXXXXXXXXXXXXXXXXXXXXX 244
           P + +TKRIV MEGD + +  +P   D  +T +                           
Sbjct: 83  PTKMVTKRIVGMEGDQINFLPDPSITDICRTVM--------------------------- 115

Query: 243 XXXXXXXXXVPKGHVWIQGDNIYASRDSRHYGPVPYGLIQGKLFFRVWPLDSFG 82
                    VPKGH+WIQGDN+YAS DSRHYGPVPYGL+QGKLFFRVWP  SFG
Sbjct: 116 ---------VPKGHIWIQGDNMYASCDSRHYGPVPYGLVQGKLFFRVWPPSSFG 160


>ref|XP_002300441.1| predicted protein [Populus trichocarpa] gi|222847699|gb|EEE85246.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  171 bits (434), Expect = 7e-41
 Identities = 89/174 (51%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
 Frame = -3

Query: 600 KFLCWLHFVDNYLFSPTHVNGPSMLPTINIAGDVILAEFLSPRLGNLGHGDLVLVRSPLN 421
           KFL +LH  +NYL SPT V GPSMLPT+N+ GDV+L E +S R   +G GD+VLVRSPL+
Sbjct: 20  KFLGFLHLTNNYLISPTLVYGPSMLPTLNLTGDVLLVEHVSHRFQKVGPGDVVLVRSPLD 79

Query: 420 PNRRLTKRIVAMEGDTVTYF-NPLNADAAQTAVVXXXXXXXXXXXXXXXXXXXXXXXXXX 244
           P + +TKRIV MEGD + +  +P   D  +T +                           
Sbjct: 80  PTKMVTKRIVGMEGDQINFLPDPSITDICRTVM--------------------------- 112

Query: 243 XXXXXXXXXVPKGHVWIQGDNIYASRDSRHYGPVPYGLIQGKLFFRVWPLDSFG 82
                    VPKGH+WIQGDN+YAS DSRHYGPVPYGL+QGKLFFRVWP  SFG
Sbjct: 113 ---------VPKGHIWIQGDNMYASCDSRHYGPVPYGLVQGKLFFRVWPPSSFG 157


Top