BLASTX nr result

ID: Glycyrrhiza24_contig00021745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021745
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528662.1| PREDICTED: putative E3 ubiquitin-protein lig...   220   1e-55
ref|XP_003550520.1| PREDICTED: putative E3 ubiquitin-protein lig...   211   6e-53
ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig...   197   2e-48
ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein lig...   196   4e-48
ref|XP_002516824.1| conserved hypothetical protein [Ricinus comm...   183   2e-44

>ref|XP_003528662.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 890

 Score =  220 bits (561), Expect = 1e-55
 Identities = 121/174 (69%), Positives = 130/174 (74%)
 Frame = -1

Query: 612  GKSKEDMIKLKAERSLQRYRDDIHELEKEIAQLRLKTDSSKIAALRMGIDGSYASRCTDM 433
            GKSKED IKLKAER+ Q YRDDIH+LEKEI+QLRLKTDSSKIAALRMGIDG YAS+C DM
Sbjct: 744  GKSKEDAIKLKAERNRQMYRDDIHKLEKEISQLRLKTDSSKIAALRMGIDGCYASKCLDM 803

Query: 432  VKNGAALEEPGASFISELVIGGYSVTGGVKRERECVMCLSEEMSVVFXXXXXXXXXXXXX 253
             KNG A +EP ASFISELVI  +S TGGVKRE+ECVMCLSEEMSV+F             
Sbjct: 804  -KNGTAQKEPRASFISELVI-DHSATGGVKREQECVMCLSEEMSVLF------------- 848

Query: 252  XXXXXXXXXXXXXXXXXXQVVCTTCNELHEKQGMQDCPSCRSPIKQRIAVRFPR 91
                              QVVC TCNELHEKQGMQDCPSCRSPI+QRIAVRFPR
Sbjct: 849  -------------MPCAHQVVCKTCNELHEKQGMQDCPSCRSPIQQRIAVRFPR 889


>ref|XP_003550520.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 877

 Score =  211 bits (538), Expect = 6e-53
 Identities = 118/174 (67%), Positives = 126/174 (72%)
 Frame = -1

Query: 612  GKSKEDMIKLKAERSLQRYRDDIHELEKEIAQLRLKTDSSKIAALRMGIDGSYASRCTDM 433
            GKSKED IKLKAER+LQ YRDDI +LEKEI+QLRLKTDSSKIA LRMGIDG YA +  D 
Sbjct: 731  GKSKEDAIKLKAERNLQSYRDDIQKLEKEISQLRLKTDSSKIATLRMGIDGCYARKFLD- 789

Query: 432  VKNGAALEEPGASFISELVIGGYSVTGGVKRERECVMCLSEEMSVVFXXXXXXXXXXXXX 253
            +KNG A +EP ASFISELVI  +S TG VKRERECVMCLSEEMSVVF             
Sbjct: 790  IKNGTAQKEPWASFISELVI-DHSATGSVKRERECVMCLSEEMSVVF------------- 835

Query: 252  XXXXXXXXXXXXXXXXXXQVVCTTCNELHEKQGMQDCPSCRSPIKQRIAVRFPR 91
                              QVVCT CNELHEKQGMQDCPSCRSPI+QRIAVRFPR
Sbjct: 836  -------------LPCAHQVVCTPCNELHEKQGMQDCPSCRSPIQQRIAVRFPR 876


>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Vitis
            vinifera]
          Length = 893

 Score =  197 bits (500), Expect = 2e-48
 Identities = 108/175 (61%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
 Frame = -1

Query: 609  KSKEDMIKLKAERSLQRYRDDIHELEKEIAQLRLKTDSSKIAALRMGIDGSYASRCTDMV 430
            KSKEDMIKLKAE +LQ+Y+DDI +LEK+I++LRLKTDSSKIAALR GIDGSYASR TD +
Sbjct: 745  KSKEDMIKLKAEANLQKYKDDIQKLEKQISELRLKTDSSKIAALRRGIDGSYASRLTDTI 804

Query: 429  KNGAALEEPGASFISELVIG--GYSVTGGVKRERECVMCLSEEMSVVFXXXXXXXXXXXX 256
             NG+A +E  A FISE+V     Y+ +GGVKRERECVMCLSEEMSVVF            
Sbjct: 805  -NGSAHKESQAPFISEMVTNFHNYAGSGGVKRERECVMCLSEEMSVVF------------ 851

Query: 255  XXXXXXXXXXXXXXXXXXXQVVCTTCNELHEKQGMQDCPSCRSPIKQRIAVRFPR 91
                               QVVCTTCNELHEKQGM+DCPSCRSPI++RI +R+ R
Sbjct: 852  --------------LPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIRIRYAR 892


>ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 883

 Score =  196 bits (497), Expect = 4e-48
 Identities = 110/176 (62%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
 Frame = -1

Query: 609  KSKEDMIKLKAERSLQRYRDDIHELEKEIAQLRLKTDSSKIAALRMGIDGSYASRCTDMV 430
            KSKEDMIKLKAE +L RYRDDI +LEKEIAQLR KTDSSKIAALR GIDG+Y S   D+ 
Sbjct: 736  KSKEDMIKLKAEENLHRYRDDIQKLEKEIAQLRQKTDSSKIAALRRGIDGNYVSSFMDV- 794

Query: 429  KNGAALEEPGASFISELV--IGGYSVTGGVKRERECVMCLSEEMSVVFXXXXXXXXXXXX 256
                AL+E  A+FISE+V  +  YS+ GGVKRERECVMCLSEEMSVVF            
Sbjct: 795  -KSMALKESRATFISEMVSNLNDYSLIGGVKRERECVMCLSEEMSVVF------------ 841

Query: 255  XXXXXXXXXXXXXXXXXXXQVVCTTCNELHEKQGMQDCPSCRSPIKQRIAVRFPRT 88
                               QVVCTTCN+LHEKQGMQDCPSCRSPI++RI+VRF RT
Sbjct: 842  --------------LPCAHQVVCTTCNDLHEKQGMQDCPSCRSPIQRRISVRFART 883


>ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
            gi|223543912|gb|EEF45438.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 894

 Score =  183 bits (464), Expect = 2e-44
 Identities = 104/174 (59%), Positives = 119/174 (68%)
 Frame = -1

Query: 609  KSKEDMIKLKAERSLQRYRDDIHELEKEIAQLRLKTDSSKIAALRMGIDGSYASRCTDMV 430
            KSKED IKLKAE +LQ+Y+DDI +LEKEIAQLRLKTDSSKIAALRMGI+ SYASR TD+ 
Sbjct: 749  KSKEDTIKLKAEINLQKYKDDIQKLEKEIAQLRLKTDSSKIAALRMGINQSYASRLTDIK 808

Query: 429  KNGAALEEPGASFISELVIGGYSVTGGVKRERECVMCLSEEMSVVFXXXXXXXXXXXXXX 250
             N A  E     F ++     YS TGGVKRERECVMCLSEEMSVVF              
Sbjct: 809  YNIAQKESSPLYFSAD--FHDYSETGGVKRERECVMCLSEEMSVVF-------------- 852

Query: 249  XXXXXXXXXXXXXXXXXQVVCTTCNELHEKQGMQDCPSCRSPIKQRIAVRFPRT 88
                             QVVCTTCN+LHEKQGM+DCPSCRS I++RI+VR+ R+
Sbjct: 853  ------------LPCAHQVVCTTCNDLHEKQGMKDCPSCRSTIQRRISVRYARS 894


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