BLASTX nr result

ID: Glycyrrhiza24_contig00021740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021740
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625615.1| Fasciclin-like arabinogalactan protein [Medi...    89   4e-16
gb|AFK36413.1| unknown [Medicago truncatula]                           89   4e-16
ref|XP_003521385.1| PREDICTED: fasciclin-like arabinogalactan pr...    70   2e-10
ref|XP_003521389.1| PREDICTED: fasciclin-like arabinogalactan pr...    59   3e-07
gb|ACU18441.1| unknown [Glycine max]                                   57   2e-06

>ref|XP_003625615.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355500630|gb|AES81833.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 258

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/96 (51%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFGXXXXXXXXXXXXXXXXQKNVQASDAP-XXXX 178
           TTVSNTIYSDNQLAVYQVD+VLLP+ALFG                +K+V+ASDAP     
Sbjct: 161 TTVSNTIYSDNQLAVYQVDQVLLPMALFGQGPTAAPAEAPAPTKPEKSVRASDAPKGSSD 220

Query: 179 XXXXXXXXXXLNGPIVKGVTFVVAILANIIVFCLWL 286
                     LNG IV G T  VA+ AN++V CLW+
Sbjct: 221 SPADDSSAVGLNGYIVNGATLFVAVFANVVVSCLWI 256


>gb|AFK36413.1| unknown [Medicago truncatula]
          Length = 256

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/96 (51%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFGXXXXXXXXXXXXXXXXQKNVQASDAP-XXXX 178
           TTVSNTIYSDNQLAVYQVD+VLLP+ALFG                +K+V+ASDAP     
Sbjct: 161 TTVSNTIYSDNQLAVYQVDQVLLPMALFGQGPTAAPAEAPAPTKPEKSVRASDAPKGSSD 220

Query: 179 XXXXXXXXXXLNGPIVKGVTFVVAILANIIVFCLWL 286
                     LNG IV G T  VA+ AN++V CLW+
Sbjct: 221 SPADDSSAVGLNGYIVNGATLFVAVFANVVVSCLWM 256


>ref|XP_003521385.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Glycine
           max]
          Length = 248

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFG-XXXXXXXXXXXXXXXXQKNVQ--ASDAPXX 172
           TTVSNTIYSDNQLAVYQVDKVLLP+ LFG                 +KNV+  A+D+P  
Sbjct: 154 TTVSNTIYSDNQLAVYQVDKVLLPMKLFGAMAPAASPAEAPAPTKPEKNVRAGAADSPSG 213

Query: 173 XXXXXXXXXXXXLNGPIVKGVTFVVAILANII 268
                       L   +V+GVTFVVA++A ++
Sbjct: 214 SDTSADASSAVSLKRHMVEGVTFVVAVVAMVV 245


>ref|XP_003521389.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Glycine
           max]
          Length = 244

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 43/99 (43%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFG-XXXXXXXXXXXXXXXXQKNVQASDA---PX 169
           TTVSNTIYSD QL+VYQVDKVLLP+ LFG                 +KNV+A  A     
Sbjct: 150 TTVSNTIYSDTQLSVYQVDKVLLPMKLFGATAPAAAPAEAPAPSKPEKNVRAGAADASSG 209

Query: 170 XXXXXXXXXXXXXLNGPIVKGVTFVVAILANIIVFCLWL 286
                        LN   VKG    VA    IIV CLW+
Sbjct: 210 SSGSSVDASNAVSLNRKTVKGFIMTVA----IIVSCLWM 244


>gb|ACU18441.1| unknown [Glycine max]
          Length = 208

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFG 88
           TTVSNTIYSDNQLAVYQVDKVLLP+ LFG
Sbjct: 154 TTVSNTIYSDNQLAVYQVDKVLLPMKLFG 182


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