BLASTX nr result

ID: Glycyrrhiza24_contig00021739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021739
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625615.1| Fasciclin-like arabinogalactan protein [Medi...    87   1e-15
gb|AFK36413.1| unknown [Medicago truncatula]                           87   1e-15
ref|XP_003521385.1| PREDICTED: fasciclin-like arabinogalactan pr...    63   2e-08
gb|ACU18441.1| unknown [Glycine max]                                   57   2e-06
ref|XP_003521389.1| PREDICTED: fasciclin-like arabinogalactan pr...    57   2e-06

>ref|XP_003625615.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355500630|gb|AES81833.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 258

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/95 (48%), Positives = 54/95 (56%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFGXXXXXXXXXXXXXXXXQRNVHASDTPXXXXX 181
           TTVSNTIYSDNQLAVYQVD+VLLP+ALFG                +++V ASD P     
Sbjct: 161 TTVSNTIYSDNQLAVYQVDQVLLPMALFGQGPTAAPAEAPAPTKPEKSVRASDAPKGSSD 220

Query: 182 XXXXXXXXXXLTGPIVKGVTFVVAILANIIVFCLW 286
                     L G IV G T  VA+ AN++V CLW
Sbjct: 221 SPADDSSAVGLNGYIVNGATLFVAVFANVVVSCLW 255


>gb|AFK36413.1| unknown [Medicago truncatula]
          Length = 256

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/95 (48%), Positives = 54/95 (56%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFGXXXXXXXXXXXXXXXXQRNVHASDTPXXXXX 181
           TTVSNTIYSDNQLAVYQVD+VLLP+ALFG                +++V ASD P     
Sbjct: 161 TTVSNTIYSDNQLAVYQVDQVLLPMALFGQGPTAAPAEAPAPTKPEKSVRASDAPKGSSD 220

Query: 182 XXXXXXXXXXLTGPIVKGVTFVVAILANIIVFCLW 286
                     L G IV G T  VA+ AN++V CLW
Sbjct: 221 SPADDSSAVGLNGYIVNGATLFVAVFANVVVSCLW 255


>ref|XP_003521385.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Glycine
           max]
          Length = 248

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFG-XXXXXXXXXXXXXXXXQRNVH--ASDTPXX 172
           TTVSNTIYSDNQLAVYQVDKVLLP+ LFG                 ++NV   A+D+P  
Sbjct: 154 TTVSNTIYSDNQLAVYQVDKVLLPMKLFGAMAPAASPAEAPAPTKPEKNVRAGAADSP-S 212

Query: 173 XXXXXXXXXXXXXLTGPIVKGVTFVVAILANII 271
                        L   +V+GVTFVVA++A ++
Sbjct: 213 GSDTSADASSAVSLKRHMVEGVTFVVAVVAMVV 245


>gb|ACU18441.1| unknown [Glycine max]
          Length = 208

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFG 88
           TTVSNTIYSDNQLAVYQVDKVLLP+ LFG
Sbjct: 154 TTVSNTIYSDNQLAVYQVDKVLLPMKLFG 182


>ref|XP_003521389.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Glycine
           max]
          Length = 244

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/98 (41%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
 Frame = +2

Query: 2   TTVSNTIYSDNQLAVYQVDKVLLPLALFG-XXXXXXXXXXXXXXXXQRNVH--ASDTPXX 172
           TTVSNTIYSD QL+VYQVDKVLLP+ LFG                 ++NV   A+D    
Sbjct: 150 TTVSNTIYSDTQLSVYQVDKVLLPMKLFGATAPAAAPAEAPAPSKPEKNVRAGAADASSG 209

Query: 173 XXXXXXXXXXXXXLTGPIVKGVTFVVAILANIIVFCLW 286
                        L    VKG    VA    IIV CLW
Sbjct: 210 SSGSSVDASNAVSLNRKTVKGFIMTVA----IIVSCLW 243


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