BLASTX nr result

ID: Glycyrrhiza24_contig00021732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021732
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520864.1| PREDICTED: uncharacterized protein At5g41620...   115   4e-24
ref|XP_003529907.1| PREDICTED: uncharacterized protein At5g41620...   109   2e-22
ref|XP_003548433.1| PREDICTED: uncharacterized protein At5g41620...   107   1e-21
ref|XP_003637217.1| SKIP interacting protein [Medicago truncatul...    87   1e-15
ref|XP_002320174.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>ref|XP_003520864.1| PREDICTED: uncharacterized protein At5g41620-like [Glycine max]
          Length = 607

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/89 (67%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
 Frame = +3

Query: 15  GLMVEKWKEGVLVGKRGGPCTPPPTWRLELPSQQXXXXXXXXXXXXXPVQEFLNFPTS-T 191
           GLMVEK K GV+VGKRGGP TPPPTWRLE PSQQ              VQEFLNFPTS T
Sbjct: 13  GLMVEKLKGGVVVGKRGGPSTPPPTWRLEFPSQQ---NENNKNKNRNQVQEFLNFPTSTT 69

Query: 192 VSARKLCANLWEIQPHQHTPLAKMNKPGT 278
           +S R LCA LW+IQPHQ  PL KMNKP T
Sbjct: 70  LSTRTLCAKLWQIQPHQLAPLPKMNKPST 98


>ref|XP_003529907.1| PREDICTED: uncharacterized protein At5g41620-like [Glycine max]
          Length = 641

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/99 (61%), Positives = 65/99 (65%), Gaps = 6/99 (6%)
 Frame = +3

Query: 3   DKRRG-LMVEKWKEGVLVGKRGGPCTPPPTWRLELPSQQXXXXXXXXXXXXXPVQEFLNF 179
           DKR G LMVEK +EG LVGK+GGP TPPPTWRLE                   VQEFLNF
Sbjct: 12  DKRGGGLMVEKLREGTLVGKKGGPSTPPPTWRLE-------------QNGGDKVQEFLNF 58

Query: 180 PTSTVSARKLCANLWEIQPH-----QHTPLAKMNKPGTT 281
            TST+SARKLCANLWE+ PH     Q TPL KMNK GTT
Sbjct: 59  STSTLSARKLCANLWEVLPHQQQQQQQTPLVKMNKLGTT 97


>ref|XP_003548433.1| PREDICTED: uncharacterized protein At5g41620-like [Glycine max]
          Length = 641

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/92 (61%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
 Frame = +3

Query: 21  MVEKWKEGVLVGKRGGPCTPPPTWRLELPSQQXXXXXXXXXXXXXPVQEFLNFPTSTVSA 200
           MVEK +EGV VGK+GGP TPPPTWRLE                   VQEFLNF TST+SA
Sbjct: 1   MVEKLREGVSVGKKGGPSTPPPTWRLE-------------QNGGDKVQEFLNFSTSTLSA 47

Query: 201 RKLCANLWEIQPH-----QHTPLAKMNKPGTT 281
           RKLCANLWE+ PH     QHTPL KMNK GTT
Sbjct: 48  RKLCANLWEVLPHHQQQQQHTPLVKMNKLGTT 79


>ref|XP_003637217.1| SKIP interacting protein [Medicago truncatula]
           gi|355503152|gb|AES84355.1| SKIP interacting protein
           [Medicago truncatula]
          Length = 559

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 53/94 (56%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3   DKRRGLMVEKWKEGVLVGKRGGPC-TPPPTWRLELPSQQXXXXXXXXXXXXXPVQEFLNF 179
           DK+R +MVEKWK+GVLVGKRGG C TP  TWR + PSQQ                   N 
Sbjct: 9   DKKRIVMVEKWKKGVLVGKRGGICSTPSTTWRFDPPSQQ-------------------NS 49

Query: 180 PTSTVSARKLCANLWEIQPHQHTPLAKMNKPGTT 281
             ST SARKLCANLW+I   QHTP AKMNK G T
Sbjct: 50  IVST-SARKLCANLWQI---QHTPFAKMNKHGGT 79


>ref|XP_002320174.1| predicted protein [Populus trichocarpa] gi|222860947|gb|EEE98489.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/84 (54%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
 Frame = +3

Query: 27  EKWKEGVL--VGKRGGPCTPPPTWRLEL-PSQQXXXXXXXXXXXXXPVQEFLNFPTSTVS 197
           +K K+G++  VGKRGGP TP PTWRLE  PS                +QEFLN  T+TVS
Sbjct: 22  QKLKQGMVLQVGKRGGPSTPSPTWRLEFSPSPNDNNNGNH-------IQEFLNTTTTTVS 74

Query: 198 ARKLCANLWEIQPHQHTPLAKMNK 269
           ARKLCAN WEIQP  H   +KMNK
Sbjct: 75  ARKLCANFWEIQPQVHLSASKMNK 98


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