BLASTX nr result

ID: Glycyrrhiza24_contig00021731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021731
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containi...   263   1e-68
ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containi...   259   3e-67
ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containi...   232   3e-59
ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containi...   232   3e-59
ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containi...   220   1e-55

>ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 646

 Score =  263 bits (672), Expect = 1e-68
 Identities = 134/189 (70%), Positives = 159/189 (84%), Gaps = 4/189 (2%)
 Frame = +3

Query: 3   SPLSKTHIWVNPKSPRAKQLWKNSH----DAVSFLAKSLNSCHPSEQHVSEILKGNLGDN 170
           S LSKT IWVNPKSPRAK LWKNS+     +++ LA+SL+SC+P++QHVSEILK  LGDN
Sbjct: 27  SSLSKTSIWVNPKSPRAKHLWKNSYHTRSSSLTKLARSLDSCNPTQQHVSEILKV-LGDN 85

Query: 171 VTEHDAEHILHNIVNPDTAILALKYFTQKIEPDRHIVLYNVILKLFRENKDFERAEKLFD 350
           V E DA  IL+++VNP TA+LA++YF QKI+  RH++LYNV LKLFRE KDFE AEKLFD
Sbjct: 86  VLEADAVFILNSMVNPYTALLAVEYFKQKIKHARHVILYNVTLKLFREVKDFEGAEKLFD 145

Query: 351 EMPQRGVKPSVLTFSTLIRCAAVCSLPHKAVELFEMMPSFGCEPDETVSSSMIYVYARTG 530
           EM QRGV P+++TFST+I CA+VCSLPHKAV+ FEMMPSFGCEPD+ V SSMIY YARTG
Sbjct: 146 EMLQRGVNPNLITFSTMIICASVCSLPHKAVKWFEMMPSFGCEPDDNVCSSMIYSYARTG 205

Query: 531 NADMALSLY 557
           NADMAL LY
Sbjct: 206 NADMALRLY 214


>ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 706

 Score =  259 bits (661), Expect = 3e-67
 Identities = 131/189 (69%), Positives = 155/189 (82%), Gaps = 4/189 (2%)
 Frame = +3

Query: 3   SPLSKTHIWVNPKSPRAKQLWKNSHDAVSF----LAKSLNSCHPSEQHVSEILKGNLGDN 170
           SPLSKT IWVNPKSPRAK LWKNS+ A S     LAKSL+SC+P+++HVSEILK  LGD+
Sbjct: 87  SPLSKTSIWVNPKSPRAKHLWKNSYHARSSSLTKLAKSLDSCNPTQEHVSEILKV-LGDS 145

Query: 171 VTEHDAEHILHNIVNPDTAILALKYFTQKIEPDRHIVLYNVILKLFRENKDFERAEKLFD 350
           V E DA  IL+++VNP TA+LA++YF QK++  RH++LYNV LKLFR+ KDFE AEKLFD
Sbjct: 146 VLEPDAVFILNSMVNPYTALLAVEYFKQKVKSVRHVILYNVTLKLFRKVKDFEGAEKLFD 205

Query: 351 EMPQRGVKPSVLTFSTLIRCAAVCSLPHKAVELFEMMPSFGCEPDETVSSSMIYVYARTG 530
           EM  RGV P+++TFST+I CA+VCSLPHKAV+ FEMMPSFGCEPD  V SSMIY Y RTG
Sbjct: 206 EMLHRGVNPNLITFSTMISCASVCSLPHKAVKWFEMMPSFGCEPDNNVCSSMIYAYTRTG 265

Query: 531 NADMALSLY 557
           N DMAL LY
Sbjct: 266 NTDMALRLY 274


>ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 692

 Score =  232 bits (591), Expect = 3e-59
 Identities = 121/187 (64%), Positives = 142/187 (75%), Gaps = 4/187 (2%)
 Frame = +3

Query: 9   LSKTHIWVNPKSPRAKQLWKNSHDAVSF----LAKSLNSCHPSEQHVSEILKGNLGDNVT 176
           LSK  IWVNP+SPRAK L KNS  A S     LAKSL+SC+P+EQHVSEIL   L DNV+
Sbjct: 64  LSKNSIWVNPRSPRAKHLQKNSPHARSSSLTKLAKSLDSCNPTEQHVSEILNV-LRDNVS 122

Query: 177 EHDAEHILHNIVNPDTAILALKYFTQKIEPDRHIVLYNVILKLFRENKDFERAEKLFDEM 356
           E DA  IL+ +VNP+TA+LALKYF  KI P +H+VLYNV LK+ RE++DFE AEKLFDEM
Sbjct: 123 ERDAVFILNTMVNPNTALLALKYFQPKINPAKHVVLYNVTLKVLRESRDFEGAEKLFDEM 182

Query: 357 PQRGVKPSVLTFSTLIRCAAVCSLPHKAVELFEMMPSFGCEPDETVSSSMIYVYARTGNA 536
            QRGVKP  +TFSTL+ CA+V  LP+KAVELFE M  FGCEPD    S M+Y YART N 
Sbjct: 183 LQRGVKPDNITFSTLVNCASVSGLPNKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNV 242

Query: 537 DMALSLY 557
           D A++LY
Sbjct: 243 DKAVNLY 249


>ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 693

 Score =  232 bits (591), Expect = 3e-59
 Identities = 121/187 (64%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
 Frame = +3

Query: 9   LSKTHIWVNPKSPRAKQLWKNSHDAVSF----LAKSLNSCHPSEQHVSEILKGNLGDNVT 176
           LSK   WVNP+SPRAKQL +NS  A S     LAKSL+SC+P+E+HVSEIL   LG+NV 
Sbjct: 65  LSKKSFWVNPRSPRAKQLQQNSPHARSSSLTKLAKSLDSCNPTEEHVSEILNV-LGNNVA 123

Query: 177 EHDAEHILHNIVNPDTAILALKYFTQKIEPDRHIVLYNVILKLFRENKDFERAEKLFDEM 356
           E DA  IL+ + NP+TA+LALKYF QKI P +H+VLYNV LK+ RE KDFE +EKLFDEM
Sbjct: 124 ERDAVFILNTMANPNTALLALKYFQQKISPGKHVVLYNVTLKVLREVKDFEGSEKLFDEM 183

Query: 357 PQRGVKPSVLTFSTLIRCAAVCSLPHKAVELFEMMPSFGCEPDETVSSSMIYVYARTGNA 536
            QRGV+P+++TFST+I  A+VCSLP KA+E FE MPSFG EPD +V+S MI+ YA +GNA
Sbjct: 184 LQRGVEPNLITFSTIISSASVCSLPDKAMEWFEKMPSFGVEPDASVASFMIHAYAHSGNA 243

Query: 537 DMALSLY 557
           DMAL LY
Sbjct: 244 DMALKLY 250


>ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 707

 Score =  220 bits (561), Expect = 1e-55
 Identities = 117/189 (61%), Positives = 141/189 (74%), Gaps = 4/189 (2%)
 Frame = +3

Query: 3   SPLSKTHIWVNPKSPRAKQLWKNSHDAVSF----LAKSLNSCHPSEQHVSEILKGNLGDN 170
           SPL +T IWVNPKSPRAK LWKN + A S     LAKSL+SC+P++QHVSEIL+  LGDN
Sbjct: 82  SPLPQTSIWVNPKSPRAKHLWKNPYHARSSSLTKLAKSLDSCNPTQQHVSEILRV-LGDN 140

Query: 171 VTEHDAEHILHNIVNPDTAILALKYFTQKIEPDRHIVLYNVILKLFRENKDFERAEKLFD 350
           V E DA  IL+++VNP TA+LA+ YF QKI+P RH+VLYNV LKLFR ++DFE AEKLFD
Sbjct: 141 VFESDAVVILNSMVNPYTALLAVNYFNQKIKPSRHVVLYNVTLKLFRASRDFEGAEKLFD 200

Query: 351 EMPQRGVKPSVLTFSTLIRCAAVCSLPHKAVELFEMMPSFGCEPDETVSSSMIYVYARTG 530
           EM QRGVKP+  TFST++ CA      +K VELFE M  FG EPD    S+M+Y YA + 
Sbjct: 201 EMLQRGVKPNNFTFSTMVNCA------NKPVELFEKMSGFGYEPDGITCSAMVYAYALSN 254

Query: 531 NADMALSLY 557
           N D A+SLY
Sbjct: 255 NVDKAVSLY 263


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